Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                <------MYB83                                --------->ANAC58                              <------MYB46(1)                             --------->ANAC58                              ----------->GT1                            --------->DAG2                             --------->MYB59 --------->TOE1(3)          ---------->DOF2                             <---------MYB46(3)                    --------->ANAC58                  <----------DOF2      <-------TEIL                --------->ANAC58     --------->ANAC46        --------->MYB46(2)                    ----------->GT1        <----------DOF2  --------->ARR14(2)        <---------MYB55(1)                    --------->DAG2     --------->KAN4(2) ------>DOF2<----------DOF2<---------MYB52(1)--------->TOE2(3)   ---------->DOF2 --------->YAB1   aaagtataccccatctttccctttgcaacgtttggtaaaaatgcataccataacaaattttagagcaaaaagcaaaaagcaaatgaaaattcctttctta  9735400                                    <---------ANAC46                                 --------->ALFIN1                                ------->MYC3                                <-------MYC3                                <-------PIF5                                             <---------YAB1                                <-------MYC2                                           <---------AHL20(2)                                ------->PIF5                                           --------->ATHB51                                ------->MYC2                                           <---------ICU4                               <---------ANAC46                                        --------->AHL20(2)                               --------->ANAC55(2)                --------------------->WRI1                               ============================bZIP_DOF                 --------->YAB1                               ============================bZIP_DOF                 <--------HAHB4                               --------->O2<-------MYC3     --------->DAG2         <---------AHL20(2)                               <---------ANAC55(2)    --------->TOE1(3)            <---------YAB1                               --------->TGA1a        --------->TOE2(3)   <---------ANAC58                               <---------O2------->MYC3    ---------->DOF2<---------ANAC58                               <---------bZIP60(2)    --------->YAB1  <---------ANAC58--------->ICU4                               <---------TGA1a     <---------CCA1(2)  <---------ANAC58<---------YAB1                            ----------->HVH21   <----------DOF2 <-------TEIL   ------>ZmHOX2a(1)  <--   gggtttgaagttgaaactagagagacatgtctcacgtggtgtccacatgtcttttatcttaaaaagttcattgtttgcttcctctataattatttttctc  9735500                            <---------ARR11(3)                         <---------AHL20(2)                        --------->YAB1                       <---------YAB1                     <---------ICU4                     -------->ATHB1                    <---------AHL20(2)                    --------->AHL20(2)                    --------->AHL20(1)             ------->GAMYB  --------->ARR11(3)             --------->YAB1             --------->TOE2(3)--------->TOE1(3)       <---------AHL20(2)      --------->YAB1            --------->MYB46(3)--------->TOE2(3)       --------->AHL20(2)--------->At4g35610          <-----------GT1--------->AHL20(2)     --------->YAB1          <---------At4g35610     ---------->DOF2--------->ICU4           --------->WOX13(1)        --------->GLK1(2) -------CCA1(2)     <---------YAB1       <---------ANAC55(2)--------->TOE2(2)<---------YAB1  <-------   atatcacaaaagtaaccacaaaattattaaaatcttaaataatacataaatcaaaataaaatcatacgtagagcatctgattatagttttcatttctttg  9735600                  --------->ATHB12                                                              <----               ------>ZmHOX2a(2)                                                          <----------DOF2              <------ZmHOX2a(2)                                                           <---------DAG2             <---------ARR14(3)                                                        <-----------GT1             --------->AGP1                                                           <---------YAB1             --------->ARR11(3)                      ---------->DOF2                --------->YAB1             --------->ARR14(2)                   --------->ANAC58                  <--------HAHB4             --------->ARR14(3)                   --------->ANAC46                  --------->ATHB51             <---------ARR11(3)                   --------->ANAC58--------->ARR11(3)<---------ICU4             <---------ARR14(2)                 <---------ALFIN1  <---------ARR11(3)-------->ATHB1            --------->GLK1(1)               ---------->ID1       <---------CCA1(2) --------->ICU4      <-----------HVH21      --------------->AtSPL8--------->MYB46(3)              <---------YAB1 <-----------GT1 <---------YAB1         <----------DOF2        --------->YAB1      <---------ATHB51-- ---DOF2 <---------TOE1(1)   --------------->AtSPL3<---------MYB55(2)         ----------->RAV1(1)  <-   tagtaacatgtccgagatcttgattgtgttttcggtaccattctttgtctccacccaaagctatatcatatctctcactcccacaattattactttttgt  9735700               <-----------GT1               <---------ARR11(3)          <---------ARR11(3)               --------->ARR11(3)          --------->ARR11(3)           <---------AHL20(2)           --------->AHL20(2)           <---------ICU4               --------->YAB1        --------->YAB1                --------->AHL20(1)       <---------AHL20(2)             --------->AHL20(2)    <---------AHL20(2)             --------->AHL20(2)   --------->AHL20(2)             --------->AHL20(2)           --------->AHL20(2)   <---------AHL20(2)        --------->AHL20(2)            --------->AHL20(2)  <---------YAB1   ------>ZmHOX2a(1) --------->YAB1        --------->AHL20(1) -----YAB1--------->AHL20(2)--------->YAB1--------->CCA1(1)<---------AHL20(2) ------->ICU4 --------->CCA1(1)   --------->YAB1      --------->AHL20(2) --------YAB1 --------->RVE1(1)--------->YAB1    ----------->GT1--------->AHL20(2)   tattattaaataataaatatcctttctccaaaataataaaaataatatctagagtataaaataaaataaaaaaacttagcctcgttcttctccctctgtc  9735800                                                                        --------->AHL20(2)                                                                       <---------YAB1                                                                       --------->ICU4                                    *TSS                            --------->ICU4                                 ---------->DOF2                <---------ZAT14                             --------->At4g35610           --------->RVE1(1)                             <---------At4g35610          --------->GLK1(2)                <---------                           --------->ZAT14                <---------ARR11(3)         <---------DAG2 -                      <---------ZAT14         ------>MYB83--------->ARR11(3)         <----------DOF2=                      --------->ZAT14         ------>MYB46(1)   --------->ZAT14--------->ZAT6  ------   tctctctctctctcggttctcttcttcactgagctcaaagcgattacctcccatgggaaaaatctctgaagtgattatttagcactactttttctttgtc  9735900                                <---------ANAC58                                <---------ANAC46                                <---------ANAC58                                    ------>ZmHOX2a(2)                       ------>ZmHOX2a(2)                           --------->WRKY18(1)                     <---------AGP1                               <-----------HVH21<------ZmHOX2a(2)                     ------->TEIL                      --------->ARR14(2)         <---------AGP1   --                     <---------ARR14(2)                <---------ARR14(2)         --------->ARR11(3) -DOF2               --------->ARR14(2)                <-----------ARR10          <---------ARR14(2) ----->ZmHOX2a(1)    <---------ARR11(3)               <---------MYB52(1)  --------->ZAT14          -- =============================HOX2a_HOX2a        <-----------GT1--------->LBD16   --------->ARR14(2) ---->ID1            --------->ARR11(3)       <---------YAB1  <---------LBD16    <---------CCA1(2) --   tccttctgaatccattttttatggatcttggagttcgtgtttctggtcatgaaaccgtttcttctccgggtcaaactgaactcggatctggtttcagtaa  9736000             --------->LBD16           ------>ZmHOX2a(2)           <---------LBD16          --------->CCA1(2)          --------->ARR14(1)          <------ZmHOX2a(2)         --------->AGP1         <---------ARR14(2)         --------->ARR14(2)         <---------ARR11(3)         --------->ARR11(1)         --------->ARR11(3)       ----------->ARR10     ---------->DOF2                                                 <---------WOX13(1) ------>NtERF2   --------->ANAC58                                             --------->At4g35610  <---------At4g35610   --------->ANAC58        <---------YAB1                 ------->TEIL  <---------GLK1(2)     ------- ------->ANAC46            --------->ICU4    ---------->DOF2    <---------At4g35610  ----------->RAV1(2) ------->ANAC58--------->ARR14(2)<---------ANAC58      --------->ANAC58 <---------ARR14(2)    <------ ------->ANAC58<---------ARR14(2)<---------ANAC58      --------->ANAC58 --------->ARR14(2) <---------At4g35610   caagcaagaaagatccggtttcgatggtgaagattgctggagaagttcaaagctctcacgaacatcaactgatggattctcttcttcccctgcctctgct  9736100                                                    <---------ARR11(3)                                                    --------->ARR11(3)                                                --------->YAB1                                              <---------YAB1                                       -------->P  -------->HAHB4                                     ==================================HOX2a_HOX2a                                     ------>ZmHOX2a(2)                                     ==========================HOX2a_HOX2a                                    ===================================HOX2a_HOX2a                 --                                    --------->CCA1(2)           <------ZmHOX2a(1)                  --                                    ===========================HOX2a_HOX2a                         --                                    <------ZmHOX2a(2)          <----------ID1    ----------->ARR10 --                                   --------->AGP1<---------TOE2(3)  --------->ANAC58             <---                                   <---------ARR14(2)       ---------->DOF2<-------MYC2        <-----       <---------ANAC58            <---------ARR11(3)    --------->TOE1(1) ------->MYC3      --------       <---------ANAC58            --------->ARR14(2) ------>ZmHOX2a(2)    ------->MYC2      <-------     <-----------HVH21    <----------DOF2--------->ZAT6 ------>ZmHOX2a(1)  <-------MYC3    <--------- -->At4g35610    --------->ANAC58  --------->ARR11(3) =================HOX2a_HOX2a <---------GLK1(2) ---At4g35610    --------->ANAC58 --------->GLK1(1)--------->YAB1   --------->ANAC58      <---------At4g35610   aaaacgctgtcgtttcatcaaggcatccctttactgagatctaccactattaatgatcctcgtaaaggacaagaacacatgcttagcttctcttctgctt  9736200        --------->At4g35610        <---------At4g35610 ------->ANAC46 ------->ANAC58 ------->AtLEC2                                                               <---------DAG2 ------->ANAC58               <---------ZAT14                                 <----------DOF2 --------RAV1(2)              --------->ZAT14                          <---------ZAT14        <------ ------HVH21         <---------ARR11(3)               --------->At5g28300   <------------------------ANAC81 ->At4g35610        <---------CCA1(2)                ----------->GT1   --------->ZAT14        <------ --At4g35610      --------->TOE2(3)              <---------ZAT14  ---------->DOF2          <--------- --------AGL1     <---------DAG2----------->GT1  --------->ZAT14<---------MYB52(2)      <-----------GT1   caggcaaatcagatgtctcaccttatcttcagtactgtagaaactcaggtctgaactgtaaaaacaactaaagtactctgctttttttttttactttctt  9736300  Previous    Next  AGI:  At2g22840.1    Description:  AtGRF1 (GROWTH-REGULATING FACTOR 1). similar to AtGRF2 (GROWTHREGULATING FACTOR 2) [Arabidopsis thaliana] (TAIR:AT4G37740.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO23917.1); contains InterPro domain QLQ (InterPro:IPR014978); contains InterPro domain WRC (InterPro:IPR014977) Range:  from: 9735836    to: 9738381    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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