Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                            <---------ZAT2                                                          --------->ZAT2                                                          <---------At4g35610                                                          --------->At4g35610                                                      ------>NtERF2                                                     --------->REM1(1)                                                    <------NtERF2                                                   ------>NtERF2                                                   <---------ATERF1(1)                                                   ----------->RAV1(1)                                                  --------->DEAR3(1)                                                  <---------ETT(2)                                                  ----------->HVH21                                                 --------->RAP2.3(1)                                                <---------ATERF1(1)                                                --------->LBD16------>NtERF2                                               --------->TOE1(2)                                               --------->DEAR3(1)                                              --------->MYB46(3)                                              --------->ATERF1(1)    --------->YAB1          --------                  <---------ANAC58            --------->DEAR3(2)    <---------YAB1           ------->GAMYB      <---------YAB1                        --------->ARR14(2)--------->DEAR3(1)            ---------   <---------TOE2(3)    ------>NtERF2       <---------ARR14(2)----------->HVH21            -------->P ------>DAG2      <---------ANAC58      --------->At4g35610--------->ARR14(2)              ------->TEIL   aaattgagattatagacttgccttgccgagagtatgagcaagagcggaaccggcgacaccagctccgacgatgatcacatcagtgccagaatcaacctcc  9733000                     <-----------------AGL1                --------->ANAC58                --------->ANAC58              --------->ARR14(1)                                                                   --              --------->CCA1(2)                <---------GLK1(2)           --------->ANAC46       ---             --------->ARR11(1)              --------->ANAC46              --------->ANAC58       ---     <---------ARR11(3)                   --------->ZAT18       <-----------GT1                   <--     --------->ARR11(3)                   <---------WRKY38(1)  <---------YAB1                     ---     <---------GLK1(2)                    <---------ZAT18   <---------YAB1 --------->ANAC58    <----- ->TOE2(2)   --------->ARR14(2)   <----------ID1         <---------YAB1  ------>NtERF2         ------ >MYB46(3)   <---------ARR14(2)  --------->DEAR3(2)   <---------YAB1    --------->DEAR3(1) --------->At4g35610   gtttcaagatttttggatacggtatcgttttgggaaacgacgagtccacgattcttcttattcttattactactccgacgcaaaatgtagagaagcagaa  9733100                                                                                                   <-                                                                                               <-----                                                                                              <------                                                                                              -------                                                                                             <------NtERF2                                                                                            ------>NtERF2                                                                                            ---------                                                                                           --------->RAP2.3(2)                                                                                           --------->DEAR3(1)                                                                                           <---------DEAR3(1)                                                                                           --------->RRTF1(3)                                                                                           --------->RRTF1(2)                                                                                           --------->RAP2.3(3)                                                                                          --------->RRTF1(1)                                                                                          --------->RAP2.6(1)                                                                                          --------->ATERF1(1)                                                                                          <------NtERF2                                                                                          --------->ERF1                                                                                          --------->DEAR3(2)                                                                                          --------->ORA47(2)                                                                                          --------->RAP2.3(1)                                                                                          --------->DEAR4(2)                                                                                         <---------ATERF1(1)                                                                                         ------>NtERF2                                                                       <------NtERF2     <---------RRTF1(1)                                                                     <---------DEAR3(1)  <---------RAP2.3(1)                                                                     <---------ANAC46   --------->ANAC46          --------->GLK1(2)                                         <---------LBD16     <---------DEAR3(1)          --------->ANAC58              <---------TOE1(2)         --------->ANAC46     --------->ATERF1(1)          --------->ANAC58              <---------TOE2(2)        <---------LBD16       <---------At4g35610 ------->TOE2(3)             ------->GAMYB                       <---------At5g28300 <---------RAP2.3(3) -------->GT1               --------->ANAC58         <---------At5g28300             <---------DEAR3(1) ------>ANAC58              --------->ANAC58     <---------ICU4<---------ZAT14     --------->ARR14(2) -------ANAC55(2)           --------->ANAC46     --------->YAB1--------->ZAT14     <---------ARR14(2) ------>ANAC58          ------>ZmHOX2a(2)<---------DEAR3(2)    --------->ZAT18     <-----------ARR10< ----ARR14(2)           --------->MYB46(3)    --------->YAB1 <---------GLK1(1)  <---------ANAC58   <- --->ARR14(2)   --------->AHL20(2)     <---------LBD16   --------->ALFIN1       <---------ANAC58<----   acgtaaatagagaagctataaattgatccaacgcaatcttcgccggtttcatcatcaccgtggagttcacggcggagagtttgagtgtctgcgccgccgt  9733200                              <---------MYB46(3)                             <---------AtMYB61                             --------->ALFIN1                             <---------DEAR3(1)                            <---------MYB52(1)                           --------->LBD16                         <-----------RAV1(2)                         <---------LBD16                       <---------ARR14(2)                                                      <-----                       <---------PCF2                                                          ------                       --------->ARR14(2)                                                      <-----       <---------DEAR3(1)<------NtERF2                                                         <----- --------ANAC58       <------NtERF2                                              <---------ZAT14 ---- --GAMYB              --------->ATERF1(1)                                 --------->ATHB12     ------ ---MYB46(3)         <---------ATERF1(1)                                 <---------YAB1        <----- -->DEAR3(1)        --------->ALFIN1                                  <---------DEAR3(1)       ------ >ABI4(1)         <------MYB46(1)                                --------->ALFIN1--------->ZAT14----- ----------DOF2   <------MYB83----------->GT1              <---------HSFB2a(2)   --------->REM1(2) --------ANAC58  <---------AtMYB61                         --------->HSFB2a(2)  <---------ANAC46<---- -----MYB52(1)   --------->MYB111(2)--------->DEAR3(2)  --------->GLK1(2)--------->ICU4      --------   tgctttccatcggcgaatgtaggtggctccggtggtgaatcgacgagtagagagagagaatcgagaagaggggcgatgatttgtgtagagaagcgaagat  9733300        <---------WOX13(1)   <---------ICU4      --------->ATHB12      ------>ZmHOX2a(1) ----AGP1                   <---------YAB1                                                        <<< --->AGP1               <---------ARR14(2)                                                     ------ ------ARR10            --------->ARR14(2)                                                  --------- ----ARR14(2)         <---------HSFC1(2)                                                    <-------- -->ZmHOX2a(2)        <---------HSFB2a(1)                                                  --------->CCA1(1) --->ARR11(3)         --------->HSFB2a(1)                                                  --------->RVE1(1) ----ARR11(3)         --------->HSFC1(2)          --------->AHL20(2)                  <------ZmHOX2a(2) --->ARR14(2)         <------MYB83             <---------ICU4                <------------CBF  <----- ---->CCA1(2)         <------MYB46(1)       --------->YAB1                  <---------KAN4(1)  <----- --ZmHOX2a(2)<---------ARR11(3)        ----------->GT1           <----------ID1      <---------ARR11(3) --->ARR10   --------->ARR11(3)   <---------YAB1  <---------AHL20(2)  --------->MYB52(1)   <XXXXXXXXX   ctaagagttgattgaaatcttggaaggttcctgattacgaatggtttcataattttttgtttagtttaagacaaacgaatattgctagatcaaatatcta  9733400   ------>MYB83   ------>MYB46(1) <---------MYB59 <<<<ZML2 --->HSFB2a(2)                                       <---------ICU4 >ARR11(3)                                          <---------AHL20(2)                             <- -ARR11(3)                                          <---------ATHB51                               -- ----HSFC1(1)             --------->GLK1(2)  ----------->GT1     <---------YAB1        --------->RVE1(1) ----HSFB2a(2)   ---------->DOF2<------------CBF --------->AHL20(2)      <----------DOF2--------->MYB52(1) XXXXXXXXXXXMIR826 ----------->GT1        --------->MYB52(1)   <------ZmHOX2a(1)--------->ANAC46-----   gaaccgaactaaaaccgagaaaagaaaaattctgaattgactccaaaccgataaattattccaaaggattatagacttttatactcaaaatatcggaata  9733500                                <---------AHL20(2)                          --------->YAB1                          --------->AHL20(2)                          <---------AHL20(2)                         <---------YAB1                       <--------HAHB4                       <---------ICU4                       --------->ATHB51                       -------->HAHB4                       --------->YAB1                       <--------ATHB1                      --------->AHL20(2)                      <---------YAB1                      <---------ATHB51                      --------->ICU4                    --------->YAB1                                                          <--------                   <---------YAB1                                                    --------->AHL20(2)                   <---------AHL20(2)                                              --------->ANAC58             ------------>CBF   --------->AHL20(2)                                 --------->ANAC58          <---------GLK1(1) <---------YAB1                                         ----------->GT1          --------->GLK1(1)<---------AHL20(2)                                    ---------->DOF2         <---------ARR11(3)<---------AHL20(1)                                   <------ZmHOX2a(1)         --------->ARR11(3)--------->AHL20(1)                                 <---------TOE2(3) --------ARR14(2) --------->AHL20(1)                                        --------->TOE1(2) ------->ARR14(2) <---------AHL20(1)     <---------REM1(1)           --------->TOE2(3)   <---------AHL20(2) ---->AHL20(2)    --------->AHL20(2)    <---------TOE2(3)            --------->TOE1(3)   <-----------GT1   aaatccgaatagatatccaatataataattatatttaaatttgatgtagtctagttatccaaaaactaaaaccataaacttaggaaagtaattactttta  9733600                                                                    <-----------GT1                                                            --------->AHL20(2)                                                         <---------AHL20(2)                                                         --------->AHL20(2)                                                        --------->AHL20(2)                        <--                                                 <---------YAB1    <---------AHL20(2)             ---                                            <---------ICU4  <---------AHL20(2)                    <--                                           --------->AHL20(1)      --------->AHL20(2)             ---                                           <---------AHL20(2)<---------AHL20(2)                   ---                                           --------->AHL20(2)--------->AHL20(2)                  <--- <---------AHL20(2)                       --------->AHL20(2)<---------AHL20(1)   <-------TEIL ------- --------->AHL20(2)                 ----------->TBP     <---------AHL20(2)  <-----------RAV1(2)  <--- --DOF2      --------->AHL20(2) <-----------TBP<-----------GT1 <---------YAB1--------->LBD16  -------   tatttaaaaaaaaaaaaaaatcgaagttttagttttttataaaaaaaaattactatttttaaattattttttaatattccaggtacttgaaatcgaaccg  9733700            --------->LBD16          <---------LBD16                               --------->ARR11(3)         --------->CCA1(2)                              <---------AGP1         --------->ARR14(1)                             <---------ARR14(2)         <------ZmHOX2a(2)                       <---------AHL20(2)        <---------ARR14(2)                      <---------WOX13(1)        --------->AGP1                        --------->ATHB12        --------->ARR11(3)                    -------->HAHB4        --------->ARR11(1)                    <--------ATHB1        --------->ARR14(2)                    <---------ICU4       <---------GLK1(1)                      --------->ATHB51       --------->GLK1(1)                     <---------ATHB12      ----------->ARR10                      --------->AHL20(2) -------ARR14(2)                             --------->ICU4    --------->ARR11(3) ------>ARR14(2)                      ------>MYB83--------->ATHB12<----------DOF2                 --- -------ARR11(1)           ----------->GT1 ------>MYB46(1)------>ZmHOX2a(2)                     <---- ---->TEIL------>ZmHOX2a(2)--------->LBD16 ------>MYB83 --------->ARR14(2)                      ----- ------>GLK1(2)           <---------HSFB2a(2)<---------ATHB51 <---------CCA1(2)                 <---- ------ARR14(1)           --------->HSFB2a(2)<---------AHL20(2)<---------ARR11(3)               ----- ---------->AGL1   <---------ATHB12   ------>MYB46(1)   <---------ARR11(3)                      ----- ------GLK1(2)   --------->WOX13(1) --------->AtMYB61  <---------CCA1(2)   ---------->DOF2      <---- ---------->AG <------ZmHOX2a(2)    <---------MYB59 <---------WOX13(1)<---------CCA1(2)         <----   aatctggagagatccggatcaatcaagtccagaaaaaaccaaaccaaataattgattggatcttaaatctttatatccaaagtacttgaaatcaaatgga  9733800           ------>MYB83           ------>MYB46(1)   --------->ANAC46  <---------HSFB2a(2)  --------->HSFB2a(2) --->ZmHOX2a(2)                                           --------->ICU4         <---------AHL20(2) -----ARR14(2)                                     <---------ZAT6                --------->AHL20(2) ---->ARR14(2)                                     ----------->GT1               <---------AHL20(1) -----AGP1 --------->MYB52(1)                      --------->ALFIN1              --------->AHL20(1) -->TEIL <---------MYB59                   --------->ATHB12--------->ATHB51   --------->YAB1        - ---->ARR11(3)                            <---------ZAT6  <---------YAB1     <---------YAB1   <------ -------ARR10                        <---------STY1(2)   --------->TOE2(3)   --------->ICU4 <-------- -----ARR11(3)                       --------->STY1(2)<-----------GT1      --------->YAB1<----------DOF2   tctactcgaaaccaaactgaatttctgtttagtagtagtagctagtgatgggagtgtaacattattgtatttttgagtaataataaattttcttttgaat  9733900  Previous    Next  AGI:  At2g22830.1    Description:  SQE2 (SQUALENE EPOXIDASE 2); oxidoreductase. similar to XF1 (SQUALENE EPOXIDASE 1), oxidoreductase [Arabidopsis thaliana] (TAIR:AT1G58440.1); similar to SQE3 (SQUALENE EPOXIDASE 3), oxidoreductase [Arabidopsis thaliana] (TAIR:AT4G37760.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO24799.1); similar to squalene epoxidase [Euphorbia tirucalli] (GB:BAF79915.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO49806.1); contains InterPro domain Aromatic-ring hydroxylase; (InterPro:IPR003042); contains InterPro domain Squalene epoxidase (InterPro:IPR013698); contains InterPro domain FAD dependent oxidoreductase; (InterPr Range:  from: 9730760    to: 9733350    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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