Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                            <----------ID1                               --------->ZAT14       ---------->DOF2         <---------At4g35610                          <---------MYB52(1) ---------ICU4                 --------->At4g35610                         <---------At4g35610 --------YAB1                  --------->ZAT18                             --------->LBD16          < -------ARR11(3)               <---------ZAT18                        <----------DOF2               < ------>ARR11(3)               <---------ZAT14                       <---------ANAC58            <--- ----->YAB1                 <---------ANAC58                <---------TOE1(1)      <---------TOE2(3)< -----YAB1 --------->TOE1(3)<---------ANAC58        <-----------HVH21<---------ANAC58          <-----   gatcattttcaaagcttaacaacaccaagtgagtgctcacagttaagacaaacatgtcatttacgaggtatgctttccgctaattaacatatgttttttg  9727900                          --------->YAB1                                    <---------ARR11(3)                    <-----------GT1                                         --------->ARR11(3) ---------ANAC58    <---------ICU4                                        --------->ICU4 ---------ANAC58--------->AHL20(2)               ------->TEIL           ---------->DOF2 ------RAP2.6(2)<---------AHL20(1)        ------>ZmHOX2a(1)    <---------ICU4 ---------ANAC46--------->AHL20(1)       --------->TOE2(3) <---------AHL20(2)              ---------- ------RAV1(1)  <---------AHL20(2) --------->REM1(1)       --------->AHL20(2)      --------->ANAC46   tggcttaaatatgaacaattaattactactataatctacaactccttaatgcatttccaatataaatatggctgtaaagatgttcacacaaactaaagaa  9728000                                                                                        <---------YAB1                                                                           <---------AHL20(2)                        --------->DAG2                                     <---------AHL20(1)                       ---------->DOF2                                     --------->AHL20(2)                    --------->YAB1                         --------->MYB52(1)      <---------GLK1(2)                   <---------AHL20(2)                      <-----------GT1 --------->AHL20(1)           --------->ANAC58         <-----------GT1    --------->YAB1     --------->AHL20(2)           --------->ANAC46    <-------GAMYB      <---------AHL20(2)      <---------AHL20(2)--------- >DOF2     --------->ANAC58   <---------ANAC46  <----------DOF2         --------->YAB1 --------->AHL20(2)   aaatttctaatacacgcctaaataataaagtgtcgttgttacaaaacattcttttatttataaacggtattcaaaaataaattcagaatttttataaaat  9728100                     <---------ATHB12                ------>MYB46(1)                        <---------ANAC58                ------>MYB83                           --------->ANAC55(2)                          -      <---------CCA1(1)           <----------DOF2      <---------ANAC55(1)      --------->MYB46(3) --      <---------RVE1(1)          <---------ANAC58      <---------ANAC58      <----------ID1    <-----     --------->ARR11(3)          <---------ANAC58      <---------ANAC55(2) <---------------AtSPL8 <--     --------->ARR14(2)   --------->AHL20(2)           <---------ANAC46--------->YAB1    <---------AHL20(2)     <---------ARR11(3)   --------->AHL20(1)         <-----------GT1  <---------YAB1    --------->AHL20(1)     <---------ARR14(2)   <---------AHL20(2)     <---------ARR11(3) --------->YAB1      <---------AHL20(1) >AHL20(2) <-----------GT1<---------AHL20(1)  ----------->RAV1(1)  <---------YAB1       <---------ARR11(3)   aagtccagatattttacctcccaaacaataaattggcttttggacttccaacatattacttgtttattgattataagaaggaacaaactatatatttcta  9728200                                                                --------->ICU4                  XXXXX                                                              --------->YAB1                <--------                                                             <---------YAB1            <--------HAHB4                                                           --------->YAB1              <---------ICU4                                                          ----------->GT1              --------->ATHB12                              <---------AHL20(2)          <---------YAB1               --------->YAB1                              <---------ICU4            --------->YAB1                --------->ICU4                        ----------->GT1         <---------AHL20(2)                  --------->WOX13(1) --------->DOF2        ----------->GT1         <---------AHL20(2)    <------------CBF <---------YAB1 ------->YAB1          <----------ID1          --------->AHL20(2)   <---------AHL20(2)<---------ATHB12 ----------AGL15  ------>ZmHOX2a(1)            <---------AHL20(1)  <---------YAB1   --------->YAB1 -- -------ATHB12   --------->TOE2(3)             --------->AHL20(1)<---------ICU4--------->AHL20(1) <--   atcaaagcgatattggaatcctaaaacgataaatatttcaaaacaaaaatttattcaaaaatgataatatttattgtgaaacatattaatcattacataa  9728300                                              <----------DOF2                                  <-----                                           ------>NtERF2                                       <-----                                     --------->RAP2.6(2)                                      <------                                     --------->DEAR3(1)                                      <-------                                   <---------At4g35610                                      <-------GAMYB                                   --------->At4g35610                                      <--------                              --------->MYB111(2)                                          <------MYB46(1)                              --------->MYB46(2)                                           --------->ATHB12                              --------->MYB55(2)      --------->GLK1(1)                    <------MYB83                              <---------MYB46(3)      <---------CCA1(1)     ------>NtERF2  --------->MYB52(2)                    <---------ARR11(3)  --------->SPL7<---------RVE1(1)  <---------ATERF1(1)<--------           --------->ETT(2)   --------->MYB52(2)     <---------ARR14(2) --------->DEAR3(1) <---------MYB46(3)       <-------TEIL --------->AHL20(1)<-----------HVH21            <-----------HVH21       --------->MYB55(2)   <---------TOE2(3)--------->ARR11(3)<---------RAP2.6(3)      --------->ANAC46           <---------AtMYB61 XXXXXXXXXXXXXXXX>MIR777    <---------MYB52(1)<---------DAG2   <---------ETT(1)     <---------AtMYB61 -ANAC55(2)--------->MYB46(3)<---------MYB55(1)   <---------ANAC46<---------bZIP60(1)    <--------P ------->TOE2(3)*TSS<---------AHL20(1)<---------SPL7 --------->ARR14(2)<---------LBD16 --------->ALFIN1 -------ICU4   <---------MYB59--------->MYB111(1)<---------LBD16  --------->bZIP60(1)  <---------ANAC46   acattaagtttcatcgaccgaatatttttcggtagttagccgtcccgacttttcggatattttgtccgacatcaccggctccagtagtggtgttggttgg  9728400                                     <---------ANAC58                                     <---------ANAC58                                   <---------MYB46(3)                            --------->ANAC46                           <---------LBD16      --------->LBD16      <------------AtMYB77    <---------LBD16      --------->ARR14(2) -MYB46(1)               --------->MYB52(1) -MYB83   <---------At4g35610--------->LBD16                            <---------DAG2 ---DEAR3(1)          --------->ANAC55(2)                               <----------DOF2 -P --------->SPL7    --------->ANAC46                            --------->ARR14(2)        --------- -ANAC58  <------NtERF2  <---------ARR14(2)   <---------TOE1(2)   <---------ARR14(2)        <-------- -ANAC58 <---------ATERF1(1)------->GAMYB <----------DOF2    <---------REM1(1)    <---------MYB52(1)   ctctagtccggcagcgtcttgttcacataaccggcattggctggctcttgggttctctcgtcgatgtagatcgacttttcttctgtttttttttttaatt  9728500                --------->YAB1                <---------ICU4                -------->HAHB4                <--------ATHB1               <---------ATHB51               --------->ICU4         <----------DOF2                                      <----------DOF2               <--------        <---------ANAC58                            ------------>CBF                ------>ZmHOX2a(2)        <---------ANAC58                           --------->ANAC58                <------ZmHOX2a(2) >AHL20(2)   --------->YAB1                      ---------->DOF2                  <---------ARR14(2) -AHL20(2) --------->AHL20(2)     <------------CBF --------->ANAC58               --------->ARR14(2)   ttcatgttttgcttttaataattctcatatgagacatattggtgatagagtgaaagcaatctcgctttctaatgcttcttatccgatctgttttcttttg  9728600                                                                          --------->YAB1                                                                         <---------YAB1                                                                       --------->YAB1              --------->ARR11(3)                                       <---------ICU4              <---------ARR11(3)                                      --------->ICU4             <---------GLK1(1)                                 <---------MYB52(1)         <---------HSFB2a(2)                                 <---------ANAC58                   -----     <---------WOX13(1)    --------->CCA1(2)                 <---------ANAC58                   <----     <-----------TBP    ----------->ARR10                --------->ARR14(2)                  ------->TEIL  <---------YAB1<---------ICU4                 ---------->DOF2<-------GAMYB                 <-------- --DOF2  --------->HSFB2a(2)           <------------CBF  <---------ARR14(2)          <---------At4g35610   agttttgatttatagaaatctttgcagagatttgagaatgaaattgaagaaaagaagtggattccgttgctaattatcatagcattaagctgttgtatct  9728700                      <------------CBF                                                     ------>NtERF2                     --------->ATHB12       <-------TEIL                             --------->GLK1(2)                    <---------YAB1         <------ZmHOX2a(2)                        <---------ARR14(2)                    <---------AHL20(2)     --------->CCA1(2)                        <---------GLK1(2)                 <----------DOF2          --------->AGP1                    <-----------HVH21<-------                 <---------DAG2           <---------ARR11(3)        <---------------------WRI1-------      ------->TEIL <-----------TBP        --------->ARR14(2)        --------->At5g28300    --------->ABI4(2) ---->TOE2(3)   <---------ANAC58          <---------ARR14(2)      <---------DEAR3(1)--------->ARR14(2) ------DOF2     <---------ANAC58          --------->ARR11(3)   <---------ETT(2)   --------->LBD16---- -CCA1(2)   <------------CBF          ---------->DOF2          --------->ETT(2) <---------LBD16------   ttaacatgagcctcgattgctttttattggtgagaaaacaaaaagatccatgttcgatgagactatcgacggtgattctttcaccggaatcggtgcccgg  9728800  Previous    Next  AGI:  At2g22820.1    Description:  unknown protein Range:  from: 9728311    to: 9728505    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At2g22821.1    Description:  other RNA Range:  from: 9728316    to: 9729017    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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