Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                --------->LBD16             <---------ANAC46             <---------ANAC55(2)             --------->ANAC55(2)             <---------ANAC55(1)  ------>ZmHOX2a(2)            <---------LBD16       =====================HOX2a_HOX2a   --------->CCA1(2)             <---------YAB1                            --------->ANAC58   --------->GLK1(1)            --------->ARR11(3)                         --------->ANAC58  --------->ARR14(2)            <---------ARR11(3)                     --------->ANAC55(2)  <---------ARR14(2)           --------->YAB1                          <---------ANAC46 <------ZmHOX2a(1)      --------->ZAT18                                <---------ANAC58 --------TOE1(3)     <---------TOE2(3)          ------>ZmHOX2a(1)      <---------ANAC55(2)    ------- --------TOE2(3)     <---------TOE1(3)     <----------DOF2   <---------GLK1(2)             --------->HSFB2a(2) --YAB1    <-----------GT1    <---------YAB1   --------->TOE2(3)       <---------ANAC58    <---------HSFB2a(2)   taaggatatgtagttacgggattaagggtgctatgatccttgaagctttcctcaagaagagcagattgttgtttcgtaagcctaagtttttttctagcac  9712800                                                                     --------->ANAC46            <---                                                           --------->LBD16                       ----                                                           <---------ATERF1(1)                   ----                                                           ------>NtERF2  <------NtERF2         -----                                             <---------At4g35610<-----------ARR10               -----                                             <---------CCA1(2)------>NtERF2--------->DEAR3(1) <------                                         <-----------TGA1<---------LBD16--------->DEAR3(1)    -------                                         <-----------HVH21<---------DEAR3(1)                  -------                                        --------->ANAC46------>ZmHOX2a(1)------>NtERF2       -------- --------->ARR11(3)            <-----------GT1       ------>ZmHOX2a(1)  <---------ALFIN1   <--------- -->ZAT6                    --------->YAB1<---------MYB52(1) --------->DEAR3(1)        <----------DOF2   taataccttcttcatcttcatggtaatcacttataactctctccgtcatctcttcctcctccggcgactcttcgccaccgtctctctctcttttcaccac  9712900                                             <------NtERF2                                           <---------ATERF1(2)                                           <---------bZIP60(1)                                          --------->RAP2.6(3)                                         --------->MYB52(1)                                        ----------->HVH21                                    --------->bZIP60(1)                                    --------->TGA2(1)                                    <---------O2                                    <---------ANAC46                                    <---------TGA1a                                    <---------bZIP60(1)                --------->ANAC58                                    <---------bZIP60(2)                --------->ANAC58                                    <---------ANAC58                 <---------ALFIN1                                    <---------ANAC58                <---------REM1(2)                                    --------->TGA1a          <---------LBD16                                    --------->O2           <---------ARR14(2)                                   ----------->STF1       --------->At4g35610 ------MYB55(2)                   <---------TGA2(2)       <---------ZAT2 ----->MYB46(3)                  ----------->HVH21        <---------At4g35610 ----->DEAR3(1)                  ----------->TGA1         --------->ZAT2 ->MYB83                       <---------At4g35610      <---------WRKY38(1)           ------>ZmHOX2a(2) ->MYB46(1)                    --------->At4g35610<---------ZAT2  <---------WRKY38(1)--------->ATERF1(1) ---ALFIN1====================================bZIP_DOF  <---------WRKY12 --------->At5g28300 -->DEAR3(1)            --------->At4g35610--------->bZIP60(1)  <-----------HVH21   --------->ARR14(2) -->AtMYB61             <---------At4g35610--------->ATERF1(2) --------->LBD16      <---------ARR14(2) ->MYB46(3)           --------->ZAT18   <---------SPL7<-----------HVH21--------->ANAC46 --GT1    ---------->DOF2  <-----------HVH21------>NtERF2----------->ARR10    ------->GAMYB   cctcccgcttgagaaagaagagactccgctgtgagatgacgtctgacggcatagctggtcagctccggtcaccacggtaaccgagggatcgcccgagagg  9713000                    <---------ANAC58                    <---------ANAC58            ------>NtERF2            <---------DEAR3(2)                            --------->AHL20(2)           <---------DEAR3(1)                             <---------AHL20(2)           <---------RAP2.3(2)                            <---------ICU4          --------->RAP2.6(3)                             --------->ATHB51         ------->GAMYB                                    --------->ATHB12        --------->MYB46(3)                               <---------YAB1        ----------->HVH21                                --------->ICU4      <---------DOF5.7(2)         --------->ARR14(2)  <---------YAB1             ------>MYB46(1)     <---------WRKY38(1)          <---------ARR14(2)--------->YAB1               ------>MYB83       -     <---------WRKY45            <------ZmHOX2a(1)  ----------->GT1            <---------MYB59      <     <---------WRKY12     --------->MYB52(1)    <---------YAB1              <---------PCF2     <-----   catagagtcaacgacggctcgagcttgtaaacggaggattgtctgatggtactattgtaattatttggaattggtgagggacctaatccaagaacaagac  9713100            --------->YAB1          ------->TEIL                                                                 --------->DAG2     <---------ANAC46                                                      --------->GLK1(1)     <---------ANAC58                                                     --------->ARR11(3)     <---------ANAC58                    --------->AHL20(2)             <---------TOE2(3)     <---------AtLEC2               ----------->GT1           <<<<<<<<<GATA-1         ---------->DOF2 -------->ALFIN1        <---------At4g35610                  <-----------GT1   <---------HSFB2a(2) -----------RAV1(1)     --------->At4g35610                <---------AHL20(2)  --------->HSFB2a(2) ----ARR11(3)           ----------->RAV1(2)        <----------DOF2  <----------DOF2 <------ZmHOX2a(1)   ctgtgttgcatgtatcatcaaaacccatctgagtcgaaatgaaaaaaatatgcctttaaaatttatctatctttgagatttcgagaggaaaaggaaatga  9713200                                                                                                   <-                                                                                                   --                                                                                                <----                                                                                                <----                                                                                                <----                                                                                                <----                                                                                                <----                                                                                               ------                                                                                               <-----                                                                                               ------                                                                                               <-----                                                                                               <-----                                                                                               ------                                                                                               ------                                                                                            <--------                                                                                            <--------                                                                                            <--------                                                                                           --------->MYB55(2)                                                                                           <---------MYB46(3)                    <---------REM1(1)                                      <---------AHL20(2) -------                  --------->At4g35610                             <---------AHL20(2) <------------CBF                <------ZmHOX2a(1)                            <---------AHL20(2)  <---------TOE2(3)---      --------->ARR11(3)      *TSS                   ---------->DOF2  <---------AHL20(2)--------->ATHB12      <---------ARR11(3)>>>>>>>>>>>>>>>>>LFY  <------ZmHOX2a(1)  <---------AHL20(2)--------->ARR11(3)   gtttagaagataatgggaggagatgaagccaatggggcttcttaagaaggagaagaaaagtattttttttattttatatttttaagaaattgatgggtgg  9713300   ----------->GT1 --------MYB46(3) ------->MYB55(2) --MYB83 -----ANAC46 -----ANAC58 --MYB46(1) -----ANAC58 --->MYB46(2) ----AtMYB61 --->MYB111(1) ----DEAR3(1) ----MYB46(3)                               ---------->DOF2 --->MYB55(2)                           <---------YAB1 --->MYB111(2)                   --------->AHL20(2)            <---------ANAC58   ---------->DOF2 -ANAC46             ---------->DOF2   <---------AHL20(2)      <---------ANAC58 ------>ZmHOX2a(1) -ANAC58         --------->WOX13(1)  <---------AHL20(2) <---------AHL20(2)    <---------LBD16 -ANAC58    --------->ICU4       <---------AHL20(2)     --------->AHL20(2)<----------DOF2     ------- -->ALFIN1----------->GT1   --------->ICU4<---------AHL20(2) <---------AHL20(2) --------->LBD16------ ------>ALFIN1 <---------YAB1--------->ATHB12      --------->ICU4      --------->ICU4       ---------   gtggatggctaatagttattaatcaaaggaatgatttatattattttaaagaaatgattttattttcttggtaattcttttcctgaaagaaaaaaaaaat  9713400              --------->bZIP60(1)            --------->YAB1                                                  --------->TGA1a         <---------ICU4                                   <---------WRKY18(1)       <-------PIF5         --------->YAB1                                  --------->WRKY12   <---------O2        --------->ICU4                                   --------->WRKY38(1)<---------TGA1a  ----------->GT1                                    <---------TOE2(3) <---------At4g35610 --------->ALFIN1                             <---------ANAC58 ------>MYB46(1)      ------->PIF5 -->YAB1<---------ATHB51                      <---------ANAC58 ------>MYB83 --------->O2 --->AHL20(1) <---------bZIP60(1)      <<<<<<<<<<GT-3b   --------->WRKY45   ========================= >AHL20(2) <---------YAB1       <----------DOF2 --------->AtLEC2       --------->At4g35610   aatgtgggaaattatgatggcacaattctctctacttttatttttcttacttgcaaaggttgaccaaatgagcatctcacttggcacttgctactattct  9713500                                                                                            <--------                                                                                           <---------AHL20(2)                                                                                           <---------AHL20(1)                                   <--------ATHB1                                          --------->AHL20(1)                      --------->LBD16                                                    <---------YAB1                     --------->ANAC46          <------MYB83                        --------->AHL20(2)                     --------->LBD16  --------->AHL20(2)                           <---------AHL20(2)                    <---------HSFB2a(2)        <------MYB46(1)                 --------->AHL20(2)              --------->DAG2       --------->YAB1                             --------->AHL20(2) ----             ---------->DOF2      --------->ICU4                        <---------YAB1  --------->AHL20(2)    --------->YAB1  --------->HSFB2a(2)<---------AHL20(2)             --------->YAB1    --------->AHL20(1)   <---------------AGL15  --------->DAG2      --------->MYB59      <---------CCA1(2)<---------AHL20(2)   --------------->AGL15 ---------->DOF2  <---------YAB1      --------->YAB1  <---------AHL20(2)<---- =======================bZIP_DOF  <---------ATHB12           --------->ICU4------->TEIL<---------ICU4   tcccactaataagagaaaagttcccgaaaaagttcaatgattttatatttggtagaagatggaattatcgtatcatgaatataaattaaatattatattt  9713600                                                                                                    <                                                                                            ---------                                                                                           --------->ANAC58                                                                                           --------->ANAC58                                                                                          <---------TOE2(2)                                                                                        <---------SPL7                                                                                       <---------ANAC58                                                                                       <---------ANAC58                                                                                      <--------------                                 <-------TEIL                           --------->AHL20(1)------->TEIL                              <---------ANAC58                          --------->ARR11(3)--------->SPL7                         --------->ATHB12                               <---------AHL20(1)<-------TEIL             <---------------AGL15                                    ------->TEIL    ---------------             --------------->AGL15                                 <---------YAB1     <--------------             <----------DOF2  <---------ANAC58         --------->ARR11(3)             ---------------  <----------DOF2       <---------YAB1                 <---------GLK1(2)<---------ARR11(3)<---------TOE1(2) -YAB1      <-----------------AGL2            <---------MYB52(1) --------->YAB1 --------->YAB1      - ------>DOF2<-----------------AGL3         <------NtERF2  --------->AHL20(2)   <---------YAB1   <---- -----AHL20(2)     --------->HSFB2a(2)  <------NtERF2  <---------ARR11(3)  <---------AHL20(2)<-------   aaagctttctccattctttttctggtatcattgggttcagtcggcatcggtattttagatttttatatcatgaatatttttatcatgaagcgtacgttat  9713700  Previous    Next  AGI:  At2g22800.1    Description:  HAT9 (homeobox-leucine zipper protein 9); DNA binding / transcription factor. Identical to Homeobox-leucine zipper protein HAT9 (HAT9) [Arabidopsis Thaliana] (GB:P46603;GB:O82763;GB:Q0WP63); similar to HAT22 (homeobox-leucine zipper protein 22), transcription factor [Arabidopsis thaliana] (TAIR:AT4G37790.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN60988.1); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Homeodomain-like (InterPro:IPR009057); contains InterPro domain Leucine zipper, homeobox-associated; (InterPro:IPR003106); contains InterPro domain Homeobox; (InterPro:IPR001356) Range:  from: 9711786    to: 9713230    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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