Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                     <---------DEAR3(1)                                           ------->MYC2                                           <-----------HVH21                                           <-------MYC3                                           ------->MYC3                                           <-------MYC2                                           ------->PIF5                                          <---------TGA1a                                          --------->O2                                          <---------O2<---------AtMYB61                                          --------->TGA1a                                          --------->ANAC46                                          --------->ANAC55(2)                                          --------->bZIP60(2)              ---------->DOF2                          <---------AHL20(2)----------->HVH21            <---------MYB59              <----------DOF2             ============================================bZIP_DOF              ======================================bZIP_DOF             --------->TOE2(3)         <---------At4g35610            <---------ALFIN1            <---------ANAC58     <-----------HVH21   --------->AHL20(2)<-------PIF5             <---------ANAC58 --------GT1  <---------DAG2            <------------OsbHLH66     <-----------GT1   atccatatgtcatatgctttatctacatttaatctaattcgtccacgtgatgggctgtggtttttttttttcttacctaaagtcatagactcacaaatct  9691400                                                                                                   --                                                                                               <-----                                                                                    --------->GLK1(1)                                                                                    <------ZmHOX2a(2)                                    --------->ANAC55(2) ---------->DOF2            --------->ARR14(2)                                    <---------ANAC55(2)<---------AHL20(2)          <---------AGP1  <-                          <---------SPL7               --------->AHL20(2)          --------->AGP1 <--                        <---------------AtSPL8     <---------AHL20(2)              --------->ARR11(3)                        <---------TOE2(3)          --------->AHL20(2)              <---------ARR11(3)                 <-----------------AGL3          <----------DOF2                   <---------ARR14(2)                 <-------TEIL--------->ANAC58   ------>ZmHOX2a(2)                 <---------CCA1(2)<-             ----------->GT1 --------->ANAC58 --------->ARR11(3)   --------->MYB52(2)------>ZmHOX2a(2)       --------->YAB1   <---------------AtSPL3<---------ARR11(3) <---------MYB52(1)<-----------ARR10<   atatttctatcaagatggatacatttatggtacgaatcacatgattttgatctttaattaaagtcttgttagttttccaatgccagatctcatcgcatcg  9691500                                                                     <---------ARR11(3)                                                               <-----------GT1              ---------                                                           --------->AHL20(2)              <---------YAB1         <---------ARR14(2)                                <---------AHL20(2)           --------->AHL20(1)         --------->ARR14(2)                                <---------ICU4               --------->AHL20(2) ---->NtERF2                                               --------->ATHB51    <-----------GT1 ----DEAR3(1)  ------>NtERF2                              --------->ICU4      --------->AHL20(2) --------ATERF1(1)                   --------->AtMYB61 --------->AHL20(2) --------->AHL20(2)--------- -------DEAR3(1)                     ------->GAMYB     <---------AHL20(2) <---------AHL20(2)<-------- --------MYB46(3)       <-----------GT1          <---------ALFIN1   <------ZmHOX2a(1)   <---------AHL20(2) ------NtERF2 <---------ALFIN1      --------->MYB46(3)--------->AHL20(2)<----------DOF2 <---------AHL20(1)   gtggctactcaaatccccacctattaataccaatttcaaccaaaacaattcccacatttaattattttcaggacctttaatttactaaaatttattattg  9691600            ------>ZmHOX2a(2)           <------ZmHOX2a(2)          <---------ARR14(2)      <---------LBD16   <----------TaMYB80      ----------------->AGL1      <-----------------AGL1     ------>MYB46(1)    --------->CCA1(2)     -------->P  <---------WRKY12 <-----------TGA1     --------->MYB52(1) --------->GLK1(1)                                                        <---     ------>MYB83<---------WRKY38(1)  --------->At4g35610                                 --------->AHL20(2)    --------->MYB55(1)  <---------GLK1(1)                                              <---------RVE1(1)   --------->AtMYB61   --------->ARR14(2)                                             <---------ARR14(2)   <---------MYB59--------->MYB52(1)  <---------At4g35610          <-------MYC3       --------->ARR11(3)   <---------MYB111(1) ---------->TaMYB80                    <-----------GT1          <---------ARR11(3) >ATHB51  --------->ARR14(2)      <-----------HVH21      --------->AHL20(2)           --------->ARR14(2) >ATHB12--------->LBD16<---------ARR14(2)          <-----------GT1 ------->MYC3  --------->AtLEC2---- -ICU4<-----------------AGL2    <-------TEIL <-------TEIL--------->YAB1  <----------DOF2  <---------AHL20(2)   ctaaacctaccggatcgggtaaacggatatgcgattcgtcagccaaattcatataacaattataaaccatatgctctttttccatgcagatattaattgt  9691700                 <---------YAB1                 ----------->TBP               --------->YAB1              <---------YAB1                         --------->ZAT18            --------->ATHB12                         --------->ZAT14            -------->HAHB4            <------ZmHOX2a(2)           --------->ICU4            --------->AGP1  <---------ZAT18           <---------YAB1            --------->ARR11(3)                                           ---         <---------ICU4              --------->ARR14(2)                                          ----         --------->YAB1              <---------ARR11(3)               --------->ANAC46           <---        --------->ICU4               <---------ARR14(2) --------->ANAC46              --------->YAB1 ------ZAT14<---------ICU4    --------->YAB1         <---------ZAT14  --------->ANAC55(2)     ------- ----->ZAT14--------->YAB1  <---------ARR11(3)---------->DOF2 <---------ALFIN1      <---------ARR11(3)   atactgcaaaataatgattataaaaaacaaaatcatatagatccactataaagagttcactcgaccacattcacataacaaaacaaaatcatacatactc  9691800                            ------>ZmHOX2a(1)                      --------->ARR11(3)                      <---------ARR11(3)                    <---------ARR11(3)      ----------->GT1<---------CCA1(2)     *TSS      --------->AHL20(2)   ---------->DOF2  --------->AHL20(1)                                                             <- ------>LBD16 <---------AHL20(2)                      <----------DOF2                       <-------- ----->HSFB2a(2)    <---------AHL20(1)           <----------DOF2                            <-------- ------HSFB2a(2)    --------->ARR11(3)  ---------->DOF2<---------MYB52(1)             --------->TOE2(3) -->ANAC46   --------->AHL20(2)        ------>ZmHOX2a(1)  <---------At4g35610         --------->TOE1(3)   cagaacaaaggaaaatttaaaatatatctccttatatactcctaaagttttctttcctttagcttcttgtttagttttattctttcaacattaacttttt  9691900                                                                                                   <-                                                                                <---------ARR14(2) --                                                                                --------->ARR14(2) --                                                                                --------->GLK1(2) ---                                                                           <---------ANAC46  <-------                          --------->ARR11(3)                  <---------YAB1    <-----------ARR10 <-- ----------GT1      ---------->DOF2                  <---------TOE2(3)  ----------->TGA1   --------->ATHB12 -DAG2          <----------ID1                   <---------DAG2         ----------->HVH21 ----------- --DOF2     ---------->DOF2                      <----------DOF2  ------>ZmHOX2a(2)    ------>ZmHOX2a(2)   tttactctcttgtcaaaagagaaaaagagttcttgtaatggatgattcaagctttatggatttgatgatcgacactgacgagtatctgatcgatgactgg  9692000                                         <---------ARR14(2)                                         --------->ARR14(2)                                       --------->LBD16                                      --------->LBD16                                     <---------LBD16             --------->CCA1(2)      ------->GAMYB            <---------ARR14(2)    -------->P --------->LBD16            --------->ARR14(2)  <---------MYB55(2)         <---------ARR14(2)          --------->LBD16       <---------MYB111(1)        --------->ARR14(2)         <---------HSFB2a(2)    --------->MYB46(3)      <---------HSFB2a(2)     --------->GLK1(1)          --------->AtMYB61       --------->HSFB2a(2)               ------>MYB83     <---------GLK1(1)          <---------MYB111(2)    ------>ZmHOX2a(2)                  ------>MYB46(1) --------ARR14(2) --------->LBD16 ------>MYB83       --------->ARR14(2)                  --------->MYB52(1) ------->GLK1(2)  <---------LBD16 ------>MYB46(1)    <---------ARR11(3)                 --------->AtMYB61 ------->ARR14(2)<---------LBD16--------->DEAR3(1)   <---------ARR14(2)                 --------->TOE1(2) ------>GLK1(1)  <---------ANAC46--------->MYB55(1)  <---------AGP1        <---------ANAC58   ------- --ANAC46--------->HSFB2a(2) --------->ZAT6 <---------ANAC58   --------->LBD16    ---------->DOF2 -------GLK1(1) <---------LBD16 <---------MYB46(2)   --------->ARR11(3)    <---------ANAC58   ------- >HVH21 <---------LBD16  <---------MYB52(2) <---------ANAC58 <---------LBD16  --------->At4g35610   gaatccgatttcccgatatgcggggaaactaacaccaaccccggttccgagtctggatctggaaccgggtttgagttgctagcagaaagaccaacgaagc  9692100                                                                                --------->ARR11(3)                                                                       ----------->HVH21                                                                      <-----------HVH21                                                                     --------->ANAC58                                                                     --------->ANAC58                                                                     --------->ANAC55(2)                                                                     --------->ANAC46                                                                     --------->ANAC55(1)                                                                     <---------O2                                                                     --------->TGA1a                                                                     <---------TGA1a                                                                     --------->bZIP60(2)         ------>MYB83                                                --------->O2         ------>MYB46(1)                                            <---------TOE1(2)        ----------->RAV1(1)                                         --------->SPL7------>ZmHOX2a(2)      --------->MYB46(3)                     <------------------------ANAC81    <---------ARR11(3)     >>>>>>>>>MYB2          --------->ARR11(3)       <<<<<<<<<TBF1 <---------ALFIN1 -->ANAC58    ----------->RAV1(1)        <---------MYB52(1)     <---------HSFB2a(2) -->ANAC58--------->MYB46(3)<---------ARR11(3)    <<<<<<<<<TBF1 --------->HSFB2a(2)   aaatgaaaaccaacaacaacatgaattcaacatcttcttctccgtcgtcttcttcttcttctggttctcgcacgtcacaagtgatctcatttgggtctcc  9692200                                                 --------->ANAC58                <-----------HVH21                --------->ANAC58           -------->P                        --------->ANAC58           ------>MYB46(1)                   --------->ANAC58           ------>MYB83                    ------->GAMYB         --------->AtMYB61               -------->P<---------AtLEC2 <---------PCF2        --------->MYB46(3)               ------>MYB46(1)            <---------ANAC46   <---------ZAT6       >>>>>>>>>MYB2                     ------>MYB83            --------->ALFIN1  <---------GLK1(2)  --------->ANAC58      <---------ARR11(3)<---------ATHB12    --------->DAG2     --------->ICU4  --------->ANAC46      --------->ARR11(3)--------->MYB46(3) ---------->DOF2   ---------->DOF2  --------->ANAC58<---------ETT(2)   --------->HSFB2a(2) <------ZmHOX2a(2)---------->DOF2  <<<<<<<<<<   agacacgaaaaccaacccggtcgagacatctttgaacttctccaaccaagtaagcatggatcagaaagtggggtcgaaaagaaaagattgtgttaacaat  9692300  Previous    Next  AGI:  At2g22770.1    Description:  NAI1; DNA binding / transcription factor. similar to basic helix-loop-helix (bHLH) family protein [Arabidopsis thaliana] (TAIR:AT2G22760.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO43474.1); contains InterPro domain Basic helix-loop-helix dimerisation region bHLH; (InterPro:IPR001092); contains InterPro domain Helix-loop-helix DNA-binding; (InterPro:IPR011598) Range:  from: 9691805    to: 9693675    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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