Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                        <---------AHL20(2)                                  <---------AHL20(2)                  <---------YAB1  --------->AHL20(2) ---------YAB1   <---------AHL20(2)  --------->AHL20(2)                          --------->PCF2 >PCF2          --------->YAB1    <---------AHL20(1)                             --------->PCF5 >TCP16(1)     <---------YAB1    --------->AHL20(2)      --------->ANAC46      <------MYB83        <- >PCF5      <---------YAB1   --------->AHL20(1)       <---------ZAT18          <------MYB46(1)    <--   taactattgaaactctgattataatggaaaacatattaaatttataggtattttagaccactcagcctcttaaatattggatggtcccatttctatctaa  9643100                                                                                    <---------AHL20(2)                                                                                    --------->AHL20(2)                                                                                    --------->AHL20(1)                                                                                    <---------AHL20(1)                                                                                 --------->YAB1                                                                                <---------YAB1                                                                               <---------AHL20(2)                                                                               --------->AHL20(2)                                                                              --------->YAB1                                                                           <---------ICU4                                                                           <--------ATHB1                                                                           --------->YAB1  --------->YAB1                                                                           <---------AHL20(1)                                                                           --------->AHL20(2)                                                                           <---------AHL20(2)           ----------->RAV1(1)                                            --------->ICU4  <---------YAB1     <-----------GT1        --------->TOE2(3)          <---------ICU4     <---------YAB1  <---------AHL20(2)   --------->AHL20(2)    <-----------GT1             --------->ANAC55(2)--------->YAB1   --------->AHL20(2) --------ICU4      --------->AHL20(2)--------->GLK1(2) --------->ATHB12<---------AHL20(2)--------->AHL20(1) -------ATHB12 ---------->DOF2 ---------->DOF2     <-----------GT1    --------->AHL20(2) <---------AHL20(1)   atcattttaacaacaacaaaagaaaatataccataaaacaatctgatttgattttacttattgctaaaaccatataataattttaataaaatataataaa  9643200                                                                                                 <---                                                                                                 ----                                                                                                 <---                                                                                                 ----                                                                                           --------->YAB1                                                                                      <---------YAB1                            <---------AHL20(2)                                       <---------AHL20(2)                            --------->AHL20(2)                                       --------->AHL20(2)               <---------ZAT18                                                      --------->AHL20(2)    ------->TEIL<---------TCP16(2)                                          --------->WOX13(1)   <---    <---------TOE2(2)       --------->AHL20(1) <----------ID1             <---------AHL20(2)  ------- --------->ANAC55(1) ------>MYB46(1)      --------->MYB52(1)              --------->AHL20(2)  ------- --------->ANAC46    ------>MYB83      --------->YAB1                 --------->AHL20(2)  --------->AHL20(2) --------->ANAC58  <---------MYB59 ---------->DOF2       --------->DAG2<---------AHL20(1) <---------AHL20(2) --------->ANAC58------->TEIL   --------->AHL20(2)      ---------->DOF2--------->AHL20(1)--------->AHL20(2)   cacacgcatgttatttgtggacctacaaaataaaataaaaagaataacagagacaaaaaaaagtcatttcaaatatataaatcaaattaaaattaataat  9643300                                                                                                 ----                                                                            <---------YAB1     ------ ------AHL20(1)                                                           <---------ICU4     ------>ZmHOX2a(2) ----->ARR11(3)            --------->MYB52(1)                            <---------YAB1     <------ZmHOX2a(2) ------ICU4          ------>ZmHOX2a(1)            <---------ANAC46     <---------AHL20(2)  <---------AGP1 ----->AHL20(1)<---------At4g35610                <---------ANAC55(2) --------->AHL20(2)   <---------ARR11(3) ------ARR11(3)--------->At4g35610  --------->TOE1(3)               ------->TEIL           --------->AGP1 -->AHL20(2)  <---------TOE1(3)     --------->TOE2(3)        ------->GAMYB--------->YAB1   --------->ARR11(3) -->YAB1     <-----------GT1       ----------->RAV1(2) --------->YAB1 --------->ICU4   <---------MYB52(1)   attttcatgtttttttaagcttccttacaaaacagaaacctgaaaccatgttacctataacaacgacatgtatttattattatttctccattagatctaa  9643400                                              --------->ZAT14                                        ------>ZmHOX2a(2)                                        <---------MYB59                                       <------ZmHOX2a(2)                                      <---------ARR14(2)                                      <-----------ARR10                                      --------->ARR14(2)                                      --------->ARR11(3)                                      <---------ARR11(3)                                      <---------AGP1       --------->ANAC46           ------>ZmHOX2a(1)                                      --------->AGP1     --------->ANAC46            --------->TOE1(3)                                     <---------CCA1(2)   <---------ALFIN1            --------->TOE2(3)                                     --------->At4g35610 --------->ANAC58    ------>MYB83                                  <---------MYB52(1)     --------->ANAC58    ------>MYB46(1)                                 <-----------HVH21     <---------ALFIN1    --------->TOE2(3) ----->MYB46(3)                 ------->GAMYB <---------ZAT14              <---------MYB59         <- --->MYB52(1)                  --------->MYB46(3)--------->ZAT14      --------->MYB46(3)       <-----   cgactcagaatcactctcacttactcattctcaaccgtcagatctaactacagtactccacaccacatacgaacaaacctaatctatccttaataccctt  9643500                                                                              <---------At4g35610                        --------->ZAT6                                <----------DOF2                      <---------At5g28300                          <---------ANAC46            <-----------GT1                                   <---------MYB46(3)           <---------YAB1                                     <-----------RAV1(1)         <-------TEIL        <---------AHL20(2)    ------>ZmHOX2a(1)              <---------WOX13(1) <----------DOF2 ---------DOF2       <-----------GT1                       --------->ATHB12   --------->At4g35610 ----MYB52(1)       *TSS<---------ALFIN1                  <---------YAB1   <---------MYB52(1)     <--   acttttgtagtttattactaaatttaccactccttccatgtttttgtttctctcttcttcttgattgttgcgcttttgttagctttctctggttcatttt  9643600                                                                                          <---------ZAT14                                                                                          --------->SPL7                                                                                        --------->ZAT14                                                                                        <---------ZAT18                              <---------ANAC58                       <---------ZAT6     <---------SPL7                              <---------ANAC46                <----------DOF2          <---------ANAC58            <---------WRKY18(1)                         ------>ZmHOX2a(1)              <---------ANAC58           --------->WRKY12   <---------ANAC58      <---------ARR14(2)             ------>ZmHOX2a(1)       ------->TEIL  --------->At4g35610            --------->ARR14(2)           ------>ZmHOX2a(2) -------AtLEC2       <---------At4g35610<-----------GT1 ================================HOX2a_HOX2a <   ccatggacggaccttgacctctctgcttcccttcgtgcattttctctctctcactatcctctctctttctagtgtttgtttgatcctctgcgtactctgt  9643700                                                 <-----------GT1                                  <--                                   ---------->DOF2                                                <--                               <---------------AGL15                                          <------MYB46(1)                               --------------->AGL15                                 --------->MYB52(2)                              <-----------------AGL1                            <--------------------           <-----------RAV1(2)<-----------------AGL2                    <-----------GT1       <------MYB83 <<<<<<<<TBF1                 <-----------------AGL3    ------>ZmHOX2a(1)  --------->WOX13(1)--------   tcttcttctctcttcaggtactagtttcaatttctctaaaaggaactattgaaacctccttctctagtttcaattttcaatctgggtttgtttgtttggt  9643800                      <---------YAB1    <---------At4g35610--------->ATHB12  <---------CCA1(2) <---------ICU4 -------ANAC58     --------->ICU4 -------ANAC58   --------->YAB1                    --------->ANAC58 ----ANAC81     <-------TEIL                       --------->ANAC58                    --------->GLK1(1) ->MYB59 <----------DOF2             <---------AHL20(2)             <---------YAB1     <---------GLK1(1)   tcttgtagcttctttggattcattatcatttgggtttagtttatttttctcgtaagtaagtgatttagttgtgattctgaattttagggaaatgctgaag  9643900                                                                         ----------->GT1                                                                        --------->DAG2                                                              --------->LBD16                                                             --------->HSFB2a(2)                 <---                                      <---------WOX13(1)    <---------LBD16    <---------GLK1(1) <---        --------->ANAC58            --------->ATHB12<---------At4g35610 <---------TOE2(3)      ------        --------->ANAC58       ---------->DOF2      --------->At4g35610 <---------TOE1(3)      ------    <---------ZAT6        <---------AtLEC2    <---------LBD16<---------HSFB2a(2)     <---------------   aagttagagtaagaaatttttggtttttgaatggaaagtgattgattttggggaagatgagttctgggaacgataaggttgaattctggctatgaaacct  9644000  Previous    Next  AGI:  At2g22670.1    Description:  IAA8 (indoleacetic acid-induced protein 8); transcription factor. Identical to Auxin-responsive protein IAA8 (IAA8) [Arabidopsis Thaliana] (GB:Q38826); similar to IAA9 (indoleacetic acid-induced protein 9), transcription factor [Arabidopsis thaliana] (TAIR:AT5G65670.2); similar to GH1 protein [Glycine max] (GB:AAB70005.1); contains InterPro domain AUX/IAA protein; (InterPro:IPR003311); contains InterPro domain Aux/IAA-ARF-dimerisation; (InterPro:IPR011525) Range:  from: 9643520    to: 9645763    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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