Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                            --------->ARR14(2)            --------->ANAC58              <---------ARR11(3)         <---------STY1(2)                --------->ARR11(3)       <---------ANAC58         --------->STY1(2) ------>ZmHOX2a(1)             <----------DOF2  --------->ANAC58 --------->GLK1(1)    <----------DOF2     <---------ARR14(2)       <---------ANAC58 ------->ZAT14    <---------ZAT18        <---------GLK1(1) <-----------RAV1(1)     --------->At4g35610 ----->ANAC46  <----------DOF2  <---------ALFIN1      <---------YAB1      --------->ANAC58 ----HVH21  --------->ANAC58 <---------ALFIN1       <---------ICU4 --------->ATERF1(1)             <-   cagaactctctagcaagctttgcactttcctccaccatcttcgatatctgttcattatgctttgttggagcctgccaagtcaaacagcttcacttaggca  9597600                                  ------------------------>ANAC81                                 <----------ID1                          ------------------------>ANAC81                                      <-----                       <---------TOE2(3)          <-----------GT1                        --------->ANAC58 --------ARR11(3)<---------ARR11(3)          ---------->DOF2  <-----------GT1            --------->ANAC58   atatcacaaacacttggaagacattaagaaacaaaaaaacaaacaaacaaagtcacaattcttttcacttcgtttacaaaacgtttgacttaagcaatat  9597700                                                                                              -------                                                                                              <------                                                                                              <------                                                                      ------>MYB83 --------->ATERF1(1)                                                                      ------>MYB46(1)         -------                                                                    --------->AtMYB61------>NtERF2                                   ---------->DOF2                  <---------MYB59<------NtERF2   --                                --------->ANAC46        --------->HSFC1(1)        --------->LBD16  --                                --------->ANAC58        --------->HSFB2a(2)       <---------ATERF1(1)                                --------->ANAC58        <---------HSFB2a(2)      --------->ETT(1)---- ----ARR11(3)      <---------TOE2(3)      <---------YAB1<---------HSFC1(1)      <---------LBD16  <---   cacaaatacttggaaggcattaagaaacaaaaacaagcaaagtcacaattgtttttttcgagaaattgaaccaaaccatattgccggagccaattgtgca  9597800                       --------->bZIP60(1)                       <---------bZIP60(1)              <---------WRKY12                                                              <--------             --------->DOF5.7(2)                                                            --------- -->ZAT18   <-----------HVH21  ------>MYB46(1)                                  <---------At4g35610 ---ZAT14   --------->TOE2(3)  ------>MYB83                                    --------->ARR14(2) ---ZAT18   --------->TOE1(3) --------->MYB52(1)                           <---------HSFB2a(2) -->ZAT14   <-----------TGA1 --------->AtMYB61                     ------>ZmHOX2a(1)    <----------DOF2 ------->ANAC58        <---------bZIP60(2)                   <-------TEIL  --------->HSFB2a(2) ------->ANAC58<---------DOF5.7(2)                          --------->ARR14(2) <---------ARR14(2) ----->At4g35610    ----------->TGA1                        <---------ARR14(2) --------->GLK1(2) ------At4g35610  --------->YAB1                            <-----------ARR10 <---------GLK1(2)   gaagccattaacaacgtcaacgatgacgagaccaacgcttgagtctcgattcaaaatcagaggttcttcctcatctactggaatctgcttctttagctga  9597900                                                                                       <---------ZAT6                 --------->ANAC58                                                <---------YAB1                 --------->ANAC58                                               --------->AHL20(2)             --------->ATHB12                                                  <---------AHL20(2)          --------->YAB1                  <---------AHL20(2)                   --------->AHL20(2)   --------->ARR11(3)                ----------->GT1                       --------->AHL20(2)<-------   <---------ARR11(3)               --------->HSFB2a(2)    <------ZmHOX2a(2)  --------->ICU4 -------- -At4g35610 <---------YAB1          <---------HSFB2a(2)    *TSS          ----------->GT1    --------- >At4g35610 --------->ICU4  --------->CCA1(2) ----------->GT1          ---------->DOF2 ----------->GT1   tcaaatatcgtttcatgattcgccatatcgatacgagtctagaaaaaattgagaaaactggatcaaaaatttgtaaagtaattaatatagagtaaacatg  9598000                                                                                                  <--                                                                                                  ---                                                                                                 ----                                                                                  --------->AHL20(2)                                                                                  <---------AHL20(2)                                                                                 --------->AHL20(1)                                                                                 <---------AHL20(2)                                                                                 <---------AHL20(1)                                                                             <---------AHL20(2)  ----                                                      <---------------AGL15  --------->AHL20(2)  ----                                                      ===============================================                                              --------->AHL20(2)          --------->YAB1    <--------                                              <---------AHL20(2)         <---------YAB1 <---------YAB1 --ICU4             <---------ANAC58      --------->AHL20(2)            --------->AHL20(2)<---------- ->YAB1             <---------ANAC58   <---------At4g35610   --------->ANAC55(2) --------->AHL20(2) < >ICU4    <------ZmHOX2a(2) <---------At4g35610       --------------->AGL15 --------->AHL20(2) <-----   atcaaaaactggatcatgttttgcttagtcagataattttcagataatataaatttctgttttaagtatttcgatataataaataaaattagtattgtta  9598100        xxxxxxxxxxxxxxx>smallRNA(se3)        xxxxxxxxxxxxxxxxxx>smallRNA(le3)        xxxxxxxxxxxxxxxxxxxx>smallRNA(le3)        xxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)        xxxxxxxxxxxxxxxxxx>smallRNA(si3)        xxxxxxxxxxxxxxxxx>smallRNA(se3)        xxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)        xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)        xxxxxxxxxxxxxxxxxxxx>smallRNA(si3)        xxxxxxxxxxxxxxxxxx>smallRNA(se3)        xxxxxxxxxxxxxxxxxxxx>smallRNA(se3)        xxxxxxxxxxxxxxxxxxx>smallRNA(fl3)        xxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)        xxxxxxxxxxxxxxxxxxxxx>smallRNA(s2)        xxxxxxxxxxxxxxxxxxxxx>smallRNA(l2)        --------->ALFIN1        xxxxxxxxxxxxxxxxxxx>smallRNA(i2)        xxxxxxxxxxxxxxxx>smallRNA(fl3)        xxxxxxxxxxxxxxxxxx>smallRNA(fl3)        <---------REM1(1)        xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)       xxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)       xxxxxxxxxxxxxxx>smallRNA(fl3)       xxxxxxxxxxxxxxxxx>smallRNA(fl3)       xxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)       xxxxxxxxxxxxxxxxx>smallRNA(si3)       *TSS       xxxxxxxxxxxxxxxx>smallRNA(se3)       xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)       xxxxxxxxxxxxxxxxxxxxxx>smallRNA(s2)       xxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)       xxxxxxxxxxxxxxx>smallRNA(si3)       xxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)       xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)       xxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)       xxxxxxxxxxxxxxxxx>smallRNA(se3)       xxxxxxxxxxxxxxx>smallRNA(se3)       xxxxxxxxxxxxxxxx>smallRNA(s)       xxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)       xxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)       xxxxxxxxxxxxxxxxxxxx>smallRNA(se3)       xxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)       xxxxxxxxxxxxxxxxxxx>smallRNA(le3)       xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)       xxxxxxxxxxxxxxxxxxx>smallRNA(fl3)       xxxxxxxxxxxxxxxxxx>smallRNA(fl3)       xxxxxxxxxxxxxxx>smallRNA(le3)       xxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)       xxxxxxxxxxxxxxxxxxxx>smallRNA(le3)       xxxxxxxxxxxxxxxxxx>smallRNA(se3)       xxxxxxxxxxxxxxxxxx>smallRNA(si3)                              ------->TEIL       xxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                          <---------ALFIN1       xxxxxxxxxxxxxxxxxxxx>smallRNA(l2)                           --------->LBD16       xxxxxxxxxxxxxxxxxxx>smallRNA(l2)                           <---------ALFIN1       xxxxxxxxxxxxxxxxxxx>smallRNA(si3)                          --------->ANAC58       xxxxxxxxxxxxxxxx>smallRNA(si3)                             --------->ANAC58       xxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                     xxxxxxxxxxxxxxxxxxx>smallRNA(le3)       xxxxxxxxxxxxxxxxxxx>smallRNA(se3)                     xxxxxxxxxxxxxxxx>smallRNA(s)       xxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                    xxxxxxxxxxxxxxxx>smallRNA(s)       xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)            xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(l2)       xxxxxxxxxxxxxxxxxxxxxx>smallRNA(l2)          ------->PIF5  --------->ANAC46    <---------ANAC46                              <---------LBD16--------->ANAC46   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)          xxxxxxxxxxxxxxxx>smallRNA(s)   <---------LBD16                           xxxxxxxxxxxxxxxx>smallRNA(s)  --------->ALFIN1                           xxxxxxxxxxxxxxx>smallRNA(le3) -------------AGL15                          xxxxxxxxxxxxxxx>smallRNA(si3) ------------>AGL15                          xxxxxxxxxxxxxxxx>smallRNA(se3) -------->CBF xxxxxxxxxxxxxxxx>smallRNA(fl3)xxxxxxxxxxxxxxxx>smallRNA(s) ------------->AGL1                         xxxxxxxxxxxxxxxxxxx>smallRNA(fl3) ------------->AG         <---------ZAT18   xxxxxxxxxxxxxxx>smallRNA(le3) =============MADS_MADS   --------->ZAT18   xxxxxxxxxxxxxxxxxxx>smallRNA(si3) -ZAT6 xxxxxxxxxxxxxxxxxxxxx>smallRNA(l2)   xxxxxxxxxxxxxxxx>smallRNA(si3)                        <-- --CBF<---------ANAC46 ---------->DOF2      xxxxxxxxxxxxxxxx>smallRNA(le3)                ----------- ------------CBF   xxxxxxxxxxxxxxxx>smallRNA(s)xxxxxxxxxxxxxxx>smallRNA(si3)       ------>ZmHOX2a(2) ------GT1  <---------At4g35610     <---------ANAC46<-------PIF5 <---------LBD16 --------->ARR11(3)   ccaattgggggtgtagctcatatggtagagcgctcgtttcgcatgcgagaggcacggggttcgattccccgcacctccattttgatctctctgtgactct  9598200                      <---------ANAC58                      <---------ANAC58                <----------DOF2                <---------DAG2             <-----------GT1                                                                        -          <---------ARR14(2)                                                                       <-          --------->ARR14(2)                                                                     ----          ------->TEIL<---------ANAC46                                                        -------       <---------ANAC58                                                                <---------ATHB12       --------->ANAC55(2)                                                         --------------->AGL15       <---------ANAC55(1)                                                        ----------------->AGL1       <---------ANAC55(2)        ---------->DOF2                                 ----------------->AG       <---------ANAC58       <---------At4g35610                                 <-----------------AGL1      <---------TOE1(2)       --------->At4g35610                   ----------->GT1<---------------AGL15 -------At5g28300   <-----------GT1      <---------GLK1(2)        <---------MYB52(1) --------->WOX13(1) >HVH21<---------ANAC46     <-----------RAV1(2)       ---------->DOF2     ---------->DOF2     -------   taccgtcttacgtatatactttttgcctgttcagatgaaagcagattatgggctaacaaagcgagcccattagttaaaaagacttcccaatcaggcaggc  9598300                                 <---------TOE2(3)                                ---------->DOF2                              <---------YAB1    --------->ANAC58    --------->AHL20(2)    --------->ANAC58    <---------AHL20(2)                                                         <- -------->YAB1       --------->AHL20(2)                                                            -- --------ATHB12      <---------AHL20(2)                                     <---------AHL20(2)     <- ----->WOX13(1)     <---------AHL20(2)                                      <---------AHL20(1)     -- -->ANAC58          --------->AHL20(2)                                      --------->AHL20(2)    --- -->ANAC58          <---------AHL20(1)    <----------DOF2       <----------DOF2                   ---   aatcacaagcgaagcccttcaatttttttaatattaaagaaaaacttttatgcatcaaaatttgaacttttattctattttattttgtgttcaatttcaa  9598400                                                       <---------MYB59                                                    <-----------GT1                                                 <---------ICU4                                                 --------->ATHB51                                                 -------->HAHB4                                                 <--------HAHB4                                                 -------->ATHB1                                                 --------->YAB1                                                --------->ICU4                                                <---------YAB1                                              --------->YAB1                                             <---------YAB1                                             <---------AHL20(2)                                             --------->AHL20(2)    <---------AHL20(2)                      <---------AHL20(1) --------AHL20(2)                           --------->AHL20(1)                                    --- ------->AHL20(1)           <---------ANAC55(2) <---------ATHB51       <---------ICU4             <-- --------AHL20(1)          <-------TEIL--------->AHL20(2)              --------->ATHB51         <---- ------->AHL20(2)    --------->ANAC55(2)    --------->AHL20(2) xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3) ------>AHL20(2)     <---------ANAC55(2)   --------->YAB1     ---------->DOF2             ----------- ------>YAB1       <-----------GT1     <---------AHL20(2)    --------->AHL20(2)      --------->AHL20(2)   ttatattatatcagaaatgtgttacatgatacataaaccatttaaatataattattaccaaaataaaagaccataatttcgataaaaaaaaatggtagta  9598500  Previous    Next  AGI:  At2g22570.1    Description:  ATNIC1/NIC1/NIC2 (A. THALIANA NICOTINAMIDASE 1); catalytic/ nicotinamidase. similar to hypothetical protein [Plantago major] (GB:CAH59421.1); contains InterPro domain Isochorismatase hydrolase; (InterPro:IPR000868) Range:  from: 9596515    to: 9597959    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At2g22580.1    Description:  pre-tRNA. tRNA-Ala (anticodon: CGC) Range:  from: 9598107    to: 9598179    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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