Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                              <---------HSFB2a(2)                         <---------ARR14(2)              ------>ZmHOX2a(1)           <---------GLK1(2)>>>>>>>ZML2            <---------ALFIN1       <---------ANAC58           <---------ARR14(2)                     --------->ZAT14         <---------ANAC46           --------->ARR11(3)      --------->ICU4 <---------ZAT14         <---------ANAC58           --------->ARR14(2)<---------LBD16      <---------ZAT18 --------->ANAC55(2)      ------->TEIL       --------->GLK1(2)       ------>ZmHOX2a(1)<---------ANAC55(2)   tatagatgtatcagatactgtctcgaggttctagggaatgttgaattggtcctgcactcctgcttagtacgtagtctcgtgttctctctattctagattt  9567400                                            --------->AGP1                                            --------->ARR11(3)                                            <---------ARR11(3)                                      --------->YAB1                                      <---------ICU4                                     <---------ATHB12                             <---------MYB46(3)                            <---------YAB1----------->ARR10  ---------->DOF2                            <---------TOE1(3)     <---------YAB1                            <---------TOE2(3) ------>ZmHOX2a(2)                            <---------AtMYB61<------ZmHOX2a(2)                    <---------ANAC58 --------->ICU4--------->YAB1                    <---------ANAC58xxxxxxxxxxxxxxxxxxx>smallRNA(fl3)  --------->ZAT6 --------->ETT(2)                <---------ANAC58   xxxxxxxxxxxxxxxxxx>smallRNA(fl3)  <-----------GT1  <---------ETT(2)                <---------ANAC58   xxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)--------->ANAC46              --------->ARR11(3)   xxxxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)      ------->TEIL   aaggggtttttgtgaatttcttgcttagttatggttgcaatgatgagatcttataatgaaattgaaagtgtttacacttcatgaacggtcgacaaaatag  9567500                        --------->YAB1                       --------->MYB46(3)              <---------ZAT2              <---------At4g35610              --------->ZAT2              --------->At4g35610           <---------MYB52(1)          <-----------HVH21         <---------MYB46(3)                                      <----------DOF2       <---------At4g35610                           <-----------GT1                 <---------ANAC58      ------------>AtMYB77                        --------->ARR11(3)                 <---------ANAC58  ----------->RAV1(2) -------->P                  <---------ARR11(3)             <---------ANAC58 ------->TEIL--------->MYB52(2)           <----------ID1  <----------DOF2        <---------ANAC58   tcgaacctgagcggttagctgagcaaccatacttatctcattttaagacaaagatttactctttctgctttagatgtttcattacttgcttagttctatg  9567600                                        ---------->DOF2                                <---------AHL20(1)                                      <---------MYB52(1)                                --------->ARR11(3)                                     --------->At5g28300                              --------->ARR11(3)                           --------->DDF1 --------->MYB52(1)                              <---------ARR11(3)               <---------At4g35610    ----------->GT1                              <---------AHL20(1)               --------->At4g35610  <---------At4g35610                              --------->AHL20(1)             <---------WRKY38(1) ----------->HVH21                   --------->YAB1  <---------AHL20(2)        <---------WRKY12  ----------->RAV1(2)                  --------->ICU4<---------ARR11(3)         <-----------HVH21--------->ETT(2)               <---------AtLEC2 --------->AHL20(1)  <----------DOF2    --------->YAB1 <---------MYB46(3)          <-----------RAV1(1)--------->YAB1      <---------YAB1<------NtERF2<---------ETT(2)        <   ttttgttttgttttgttgcaaggatgagcaaaaatattttttgaaagcattgtgcttaatgagtcagcgactataatgtcgacctgagcggttaactgag  9567700                                 <-----------GT1            <----------DOF2                  <-------       --------->DAG2        <----------DOF2      <---------MYB52(1)                        <--------      ---------->DOF2        <---------DAG2      <-------GAMYB                 <------------CBF------ ---------MYB52(2)        <-----------GT1       ----------->GT1<-----------RAV1(1)      --------->ANAC55(2)   caactaaaaaaagctgcttctctaaaattcactttttacgaataattttgctgttaatttttcttttgttgtgaattttgctattgatataggtaattga  9567800                                                                                          <----------DOF2                                                                                        <---------At4g35610                                                                                        --------->At4g35610               --------->LBD16                                                      xxxxxxxxxxxxxxxxx          ------>MYB46(1)                                                           xxxxxxxxxxxxxxxxx          ------>MYB83                                                             ----------->RAV1(2)       ----------------->AGL1                                                      <---------ZAT2       ------------>CBF           --------->YAB1                                   <---------At4g35610     <-----------GT1      <---------YAB1                                           --------->ZAT2  <---------ZAT6       <---------YAB1      ----------->GT1                         --------->At4g35610 --WOX13(1)   --------->LBD16<---------YAB1xxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)     ------------------- ----CBF --------->WOX13(1)--------->YAB1*TSS                                    <-----------RAV1(2) --->ATHB12  <---------LBD16 ----------->TBP             ------->TEIL          <-----------HVH21<----   tttagagttaccaatcccggtctatatgattataaataagaatgagagtaatatagttgaatcttcgaaagtatttcaagaagtcagctgagctttctcg  9567900                                                                    <---------YAB1                                                                   xxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                                                                   xxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                                          --------->WRKY12                                                          --------->WRKY45                                                          --------->WRKY38(1)                                                         --------->DOF5.7(2)                                                       <---------ANAC46                                                   --------->HSFB2a(1)                                                   --------->HSFC1(2)                                                   <---------HSFB2a(1)                                              xxxxxxxxxxxxxxxxxxxx>smallRNA(se3)         ----------->GT1                      xxxxxxxxxxxxxxxxxxxx>smallRNA(si3)             <-------       <---------YAB1                         xxxxxxxxxxxxxxxxxxxx>smallRNA(le3)      <-----------RAV1(1)   --------->ANAC55(2)                       <---------WOX13(1)    xxxxxxxxxxxxxxxxxxx>smallRNA(se3)   <---------ANAC55(2)                     --------->ATHB12    <---------ICU4     xxxxxxxxxxxxxxxxxxx xxxx>smallRNA(se3)                       --------->ICU4 <---------MYB52(1)       XXXXXXXXXXXXXXXXXXX xxxx>smallRNA(si3)                       <---------YAB1<-------GAMYB             xxxxxxxxxxxxxxxx>smallRNA(i) ---->TaNAC69(2)                   <---------YAB1  <---------HSFC1(2)             xxxxxxxxxxxxxxxx>smallRNA(s) -------TGA1                <---------AHL20(2)XXXXXXXXXXXXXXXXXXXX>MIR779.2<---------YAB1 <---------At4g35610   tcatcacttattagtaaatatagtctctatatttttgatgagtgatgattggaaatttcgttgactcattactcttgatgattctgctatgttgctgctc  9568000                                                            <---------ZAT6                                                            <---------ANAC46                   <-----                                                          <---------ANAC46                     <-----                                                        <---------ZAT14                    --------->GLK1(1)                                                        --------->ZAT14                    <---------GLK1(1)                                                       <---------ANAC46                  <------NtERF2                                                   >>>>>>>>>ARR2                        ------>NtERF2                                               ===============================================bZIP_DOF                          ---------->DOF2      <----------DOF2                      --------->TGA1a <                   --------->TOE1(3)          <---------ANAC58                      --------->O2 <--- <-----------RAV1(1)  ---------->DOF2         <---------ANAC46                      <---------O2<---- --At4g35610       --------->YAB1--------->ANAC58 --------->ATHB12                  <---------TGA1a - xx>smallRNA(se3)  --------->TOE2(3)          <---------ANAC58         --------->ZAT18 <---------DEAR3(1) X>MIR779.1     --------->YAB1   --------->ANAC58<---------YAB1        <---------ZAT18--------->TGA2(2)   attatgttgtatcacctataatcttaaagaaagacatggaacggtattgctttgattgtgtagtgtggacatgtccactagcgaagacgtcggcattccg  9568100                                                         <------MYB46(1)                                                         <---------MYB46(3)                                                         <------MYB83                                                      <-------GAMYB                                                     --------->MYB111(1)         <---------KAN4(2)                           --------->MYB111(2) ----ANAC58                              <---------MYB52(1)                           <-----------GT1 ----ANAC58                      <---------YAB1      --------->MYB55(2)   --------->ARR11(3) ---------HSFB2a(2)     --------->AHL20(2)          <--------P            <---------ARR11(3)  ------- ------MYB52(1)   --------->TOE2(3)    <---------YAB1<---------MYB46(3)<---------WOX13(1)    -------- -----SPL7  <-----------GT1   ---------->ID1    <---------ANAC46    <---------YAB1 ----------->GT1 -------->HSFB2a(2)     <---------AHL20(2) --------->MYB52(2) <---------YAB1     <---------ANAC46   ttcgagatgagaattttcaacatcaattttttgttgttattctgttagtgactggttgttggttttgattttgatagatattggtttgtaacattttggt  9568200                                                                  <---------YAB1                               --------->ARR11(3)               --------->YAB1                               <---------ARR11(3)               --------->ATHB12             --------      --------->YAB1   <---------YAB1                           <---------ICU4               <------- ---->GT1           <---------YAB1                             <---------YAB1               --------- ->MYB59          ----------->GT1------>ZmHOX2a(2)           --------->YAB1    ------>ZmHOX2a(1)   aaattccataacaatgtgatttgttattactctgatcttgtatgtttgtattgtctatgtctattatcattgtagttcgtcctacaaatatttgcctaga  9568300  Previous    Next  AGI:  At2g22496.1    Description:  MIR779a; miRNA Range:  from: 9567841    to: 9568003    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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