Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                <----------DOF2       <------ZmHOX2a(1)             --------->LBD16             <---------ARR11(3)   --------->ANAC58            --------->At4g35610            --------->HSFB2a(2)        ------>MYB46(1)        --------->ANAC58          --------->ATHB12            <---------HSFB2a(2)        ------>MYB83           --------->ANAC46         <---------ATHB12      <---------ICU4                  ----------->RAV1(1)  --------->ZAT14            <-----------HVH21 -------->YAB1                      --------->MYB46(3)     <---------ZAT14    >>>>>>>>>TBF1   taacataatcagttccagggcaaaactcaatctctctcaccaacatctctttgattctgtcttcactcaaggacgatgaagaagaacccatcatcggaat  9562800                                                                         <------NtERF2                                                                        ------>NtERF2                                                                       <---------ATERF1(2)                                                                       --------->DEAR3(1)                                                                       --------->DREB2C(2)                                                                       --------->ATERF1(2)                                                                       --------->ANAC46                                                                       --------->RRTF1(2)                                                                       --------->RRTF1(3)                                                                       --------->RAP2.6(2)                                                                       --------->RAP2.3(3)            ---------->DOF2                                            --------->RAP2.3(2)          <------NtERF2                                               --------->ATERF1(1)         ------>NtERF2                                                --------->RAP2.6(1)         <---------RAP2.6(3)                                          --------->ERF1         --------->LBD16                                              --------->RRTF1(1)        <---------ATERF1(2)                                           --------->ORA47(2)        --------->ATERF1(2)                                           --------->RAP2.3(1)        --------->DEAR3(1)                                           --------->At4g35610        --------->RAP2.6(2)                                          --------->LBD16        --------->ANAC46                                             ------>NtERF2       <---------RAP2.6(2)                                          --------->ANAC46       --------->ATERF1(1)               <---------MYB46(3)      <---------ARR14(2)       --------->RAP2.3(1)            <------MYB46(1)           <---------GLK1(1)      <---------ATERF1(1)             <------MYB83              --------->GLK1(1)               <----    <---------MYB52(1)          ---------->DOF2    --------->WOX13(1)<---------ATERF1(1) <---------ICU4   --------->At4g35610  <----------DOF2 <---------YAB1      ----------->GT1             <---------YAB1 ------>ZmHOX2a(2) ---------->ID1--------->DAG2  <---------ATHB12--------->ARR14(2)   --------->YAB1   tgatccgttgccgccaaagttgtcgtctttagcaaaaagttggtgattgtaatcaatctcgttcgtaaatccgccgccatagttgatatcatcatcgtcg  9562900                                       --------->GLK1(2)         <---------MYB46(3)     --------->YAB1                                      --------->ARR14(2)        <---------WOX13(1)     <---------YAB1                                      <---------GLK1(2)        >>>>>>>>>ARR2         --------->YAB1                                --------->ANAC58              --------->ATHB12     <---------WOX13(1)                                --------->ANAC46          <<<<<<<<<<MYB80        --------->ATHB12                                --------->ANAC58         <------MYB46(1)        <---------YAB1        ------>ZmHOX2a(2)<-----------GT1    --------->ANAC46 <---------YAB1     --------->ICU4     --------->YAB1<---------TOE1(2)  <---------ARR11(3) <------MYB83 <-----------RAV1(1)    <---------ATHB12<---------MYB46(3)<---------ARR14(2)--------->MYB59    <---------ANAC46        -- ---GAMYB          <---------TOE2(2)----------->ARR10   <---------AtMYB61<---------ANAC46          <-   ttgtcaatgatccatgactcgctggtttcaccacaagcaagattctcagccatggggtttggtttgattgttgtgttgtgtattgattgataatagtctg  9563000                       ---------->DOF2             ----------->GT1                --------->ALFIN1                 ---------->DOF2                <---------AtMYB61              --------->ANAC58              <---------ANAC46                 --------->ANAC58              <---------YAB1              <---------ANAC58          --------->SPL7                ---------->DOF2              <---------ANAC58        <---------SPL7              --------->ANAC58        --------->ATHB12             <---------ANAC58             --------->ANAC58      <---------MYB52(1)             --------->HSFB2a(1)        <------ZmHOX2a(1)          --------->GLK1(1) ------->AHL20(2)<------MYB83        <---------HSFB2a(1)      <---------TOE2(3)            <---------GLK1(1) --------AHL20(2)<------MYB46(1)     <---------ANAC58        --------->MYB52(1)---------->DOF2     <-   tttaattcgtttattggggtggtctcaaagtttttgagagcgttcggacaagaaagtgaaaactaaggaagcaaaagtcatcaaagatgggagatttctg  9563100                                                                                  <---------ANAC58                                                                                  <---------ANAC46                                                                                  <---------ANAC58                                                                              <---------ANAC58                                                                              <------MYB46(1)                 <---------GLK1(1)                                            <---------ANAC58                --------->ARR14(2)    <------ZmHOX2a(1)                       <------MYB83               <------ZmHOX2a(1)   <---------At4g35610                       <---------MYB46(3)         <---------ANAC58          --------->At4g35610                  ---------->DOF2         <---------ANAC58   <---------AtLEC2                <---------ANAC46--------->ALFIN1 <------- -----ZmHOX2a(1)<---------ARR14(2) <------NtERF2  <------ZmHOX2a(1)    <------ZmHOX2a(1) <----------DOF2   aggaggttttgtcttgaggaactgcgattttcatggcagaggagaagagagaggagagagaggcttatacagaggaaagtgggtgagtgtgttttagggt  9563200                         --------->ANAC58                                       <---------AHL20(2)                        ====================================================MADS_MADS                        --------------->AGL15                                   <---------AHL20(1)                        <---------------AGL15                                   --------->AHL20(1)                       <-----------------AGL1                                  <---------AHL20(2)                --------->ZAT14                                                --------->YAB1                <---------ZAT14                                                --------->AHL20(2)              --------->ANAC58                              <---------------AGL15    --------->AHL20(2)              --------->ANAC46                             <-----------------AGL3<---------YAB1     <              --------->ANAC58                            ------------>CBF --------->AHL20(2)    ----            <---------ALFIN1   ----------->GT1 <---------ARR14(2)         --------->AHL20(2)--------- --------->ALFIN1    *TSS--------->ANAC58      --------->ARR14(2)         <---------AHL20(2)<-------- --TOE2(3)  --------->AtMYB61 ----------->GT1<---------KAN4(2)     ----------->GT1   <---------AHL20(2)   agagaggggagagaccactccacagactcgaaatggaaaatacagagaatatacactaagaacaatatgtggaaatataaattatatttaaaatttaaat  9563300                                                                                                 ----                                                                                             <-------         --------->YAB1                                                                <---------AHL20(2)       <---------YAB1                                                                  --------->AHL20(2)    <---------YAB1                                      ----------->GT1                --------->AHL20(1)  ----------->GT1                                    --------->YAB1      xxxxxxxxxxxxxxxxxxxx>smallRNA(le3) ------------CBF                              <---------AHL20(2)        xxxxxxxxxxxxxxxxxxxx>smallRNA(le3) ----->YAB1                                  --------->AHL20(2) <----------ID1        --------->AHL20(2) >AHL20(2)                     ------>ZmHOX2a(1)    <---------YAB1      xxxxxxxxxxxxxxxxxxxxx>smallRNA(si3) -AHL20(2)            <-----------GT1        <---------AHL20(2)------------------------>ANAC81-------   catattgttattaatagtttaatatcacaagtccttataaactaaatttaaattgtcatagtaaaaacgacaaaaaaaaaaaaaaaaaaaaaattgtcat  9563400                           --------->YAB1                           --------->TOE2(3)                         <---------------------WRI1                        <---------DOF5.7(2)                       <---------WRKY45                       <---------WRKY38(1)                       <---------WRKY12                         --------->ICU4                -------                   --------->DAG2                               <---------YAB1       <---------ARR11(3) ------->GT1      ---------->DOF2                --------->AHL20(2)<---------TOE2(3) --------->ARR11(3) --YAB1        <---------ANAC55(2)   --------->DAG2        <------MYB83          --------->LBD16   -- -->YAB1     --------->AHL20(2)     ---------->DOF2        <------MYB46(1)<---------GLK1(1)   <------   agtaaaatttagaaattacataaagtcaacgataaaaaaaaagtattccaaaaaaataagttggtcataaatgttgaaatctccagagatactattccca  9563500                                                                                                   --                                                                                                   <-                                                                                                   <-                                                                                                   --            <-----------GT1                                                        <---------AHL20(2) -------->AGL15                                                              <----------DOF2       <- -------->DOF2           <<<<<<<<<MYB2      <---------ZAT6            --------->YAB1          <------ ---------AGL15    <---------AHL20(2)     <---------ANAC46 --------->HSFB2a(2)     <-----------GT1<--   aaaaagaagacaattcactattttttggttttcatgttcttgtttagtgttttgtaaacttctgaaattgaatcatatgctttatttacttctatttagt  9563600           <---------TOE1(3)      <----------DOF2  <----------DOF2                           ----------->RAV1(1) ------>ZmHOX2a(2)                          ------>NtERF2                                          <- ------->ARR14(2)            --------------------->WRI1        --------->CCA1(2)                 ---- --------ARR14(2)           <---------HSFC1(2)                <---------ARR11(3)              ------>ZmHOX2a(2) --------ARR11(3)           <---------HSFB2a(1)        <---------ANAC46                      <------ZmHOX2a(2) ------->ARR11(3)           --------->HSFC1(2)       <---------DOF5.7(2)                    --------- --------AGP1    <---------TOE1(3)        ----------------->AGL1                            <-------- ---ANAC46 <---------TOE2(3)--------->HSFB2a(1)    --------->DOF5.7(2)----------->GT1       xxxxxxxxx -------CCA1(2)  <---------TOE2(3)      --------->ANAC46      --------->ARR11(3)            <--------   ggatctttcttttgaggttaaggttagggaaccttgtgctattcgccaacatcggtaacgtcgagatataaaccgaaaaaacaataactaataagatctc  9563700  Previous    Next  AGI:  At2g22490.1    Description:  CYCD2;1 (CYCLIN D2;1); cyclin-dependent protein kinase regulator/ protein binding. Identical to Cyclin-D2-1 (CYCD2-1) [Arabidopsis Thaliana] (GB:P42752;GB:Q0WRQ1;GB:Q1LYY4); similar to CYCD4,1 (CYCLIN D4,1), cyclin-dependent protein kinase regulator [Arabidopsis thaliana] (TAIR:AT5G65420.1); similar to cyclin D2 [Daucus carota] (GB:CAD43141.1); similar to cyclin D2.1 protein [Nicotiana tabacum] (GB:CAA09852.1); contains InterPro domain Cyclin D (InterPro:IPR015451); contains InterPro domain Cyclin (InterPro:IPR006670); contains InterPro domain Cyclin-related (InterPro:IPR013763); contains InterPro domain Cyclin, N-terminal (InterPro:IPR00667 Range:  from: 9560883    to: 9563221    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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