Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                --------->At4g35610                                                              <---------At4g35610                                                             --------->MYB52(2)                                                           <---------MYB52(1)                                                         <------MYB83                                <---------At4g35610      <------MYB46(1)                  ---------->DOF2                       --------->MYB59                 <---------AHL20(2)                 <------MYB83         ----------->HVH21                 --------->AHL20(2)                 <------MYB46(1)--------->YAB1                 <-- -->YAB1 <------ZmHOX2a(1)      <---------GLK1(1)  --------->MYB59<---------YAB1    <----------DOF2 --YAB1 <----------ID1--------->ALFIN1     ----------->GT1<-------GAMYB--------->DAG2   ----------->HVH21   agagttttagaggacaaaattaaagtgggattggagatgctaagtatgtaaatttggttcggttagctatcataagggaccgagtgctatatgacaatgt  9548100                                                                                                  <--                                                                                        <---------ANAC58                                                                                        <---------ANAC58                                                                                        <------MYB46(1)                                                                                        <------MYB83                                                                                       --------->MYB55(2)                                                                                       <---------MYB46(3)                                                                                    <-------GAMYB ---                                                                                   --------->MYB111(2)                                                                                   --------->MYB46(2)                                                                                   --------->MYB55(2)                                                                                   --------->MYB52(2)                                                                                   --------->MYB111(1)                                                                                   <---------MYB46(3)                                                                                ------------>MYB.PH3(2)                                           ------>ZmHOX2a(1)                    <------MYB46(1)   ---                                          --------->TOE2(3)                    --------->MYB46(2) <--                                          --------->TOE1(3)                    --------->MYB59   <---                --------->ARR11(3)     <---------ZAT18                         --------->MYB111(1)---       ---------->DOF2   ----------->RAV1(2)       <-------TEIL               <--------P<---------ANAC46 -------YAB1----------->GT1------>ZmHOX2a(1)      <---------MYB52(1)------->TEIL<------MYB83     <---   attataggtaaaagaagtgatattgtctcctgtagatttagtgtccttaaccgttcatcaaatctatgtgaatctcagtagtaggtagttgggtgaagaa  9548200  --------->ZAT14                              <---------AHL20(1)  <---------ZAT14                              --------->AHL20(2) -----MYC3                                     --------->AHL20(1) ------>TOE1(2)                                <---------AHL20(2)        <---------AHL20(2)        -- ---->MYC2                                     <---------ARR11(3)       <---------AHL20(2)       ---- -----MYC2                                  --------->AHL20(2) ------->TEIL                      <--- ------ANAC58                            --------->YAB1       <-----------GT1          ---------->DOF2 ---->MYC3                  ------>ZmHOX2a(1)  --------->ARR11(3)       --------->AHL20(2) --------->ARR11(3) ------ANAC58         <-----------GT1   <---------YAB1  <-------TEIL<----------DOF2 --------->TOE2(3)   cgtgtgaagtctatacaactcatattactcctcaaacattttctgataatatattgcatacattgaacctctttttaaattcaaaacatcaaaggtattg  9548300                                                                                                    -                                                                                                 ----                                                                                                 <---                                                                                                <----                                                                                                -----                                                                                              <------                                                             <---------YAB1                   <------                                                             --------->ICU4                  --------      ----------->GT1                                    --------->TOE2(3)                   <------- ---->ZmHOX2a(2)                              ------>ZmHOX2a(2)          ---------->DOF2   --------->YAB1 ----->ARR11(3)               <-------TEIL  <---------ARR11(3)<---------ICU4              <---------YAB1 ------ARR11(3)           <---------TOE1(2) --------->ARR11(3)--------->ATHB51     ---------->DOF2 <-   atcttacatagaaaaaaacatagactcttatgttcatgtccctattgatcttagtcatacctcataattgtctaacaaagaaaatcaaaggtatcataat  9548400  <---------YAB1 -------->YAB1 ----->YAB1                                                 --------->AHL20(2) ------ICU4                                  --------->AHL20(2) -----YAB1                                   ----------->TBP--------->AHL20(1) ---->ICU4                                   <---------AHL20(2) <-----------GT1 --HAHB4                --------->ARR14(2) ----------->TBP  <---------AHL20(2) ---ICU4                --------->GLK1(2)  <---------AHL20(2)<---------ICU4      *TSS --------->MYB52(1) ->ICU4     <---------REM1(1)            ----------->TBP   --------->AHL20(2) ---------->DOF2-------- --YAB1--------->ANAC55(2)       <-----------GT1    --------->ZAT6  ---------->DOF2  ---------->DOF2 --------YAB1           <---------ARR14(2) --------->AHL20(2)------------------------>ANAC81 --------   tatcatcatatgtaatgtagggaacaaatctgtatttactggtatatatatataacacaaaaaaaattaccaaagaaaaaaaaagagcaaagggaacgat  9548500                                                                      --------->ANAC58                                                                --------->DEAR3(1)                                                               <------NtERF2                                                               --------->ATERF1(1)                                                               --------->RAP2.3(1)                                                              ------>NtERF2                                                              --------->ABI4(1)                                                              <---------ATERF1(1)                                                             --------->RAP2.3(3)                                                             --------->RAP2.3(2)                                                             <---------DEAR3(1)                                                             --------->DEAR3(1)                                                             --------->RRTF1(2)                                                             --------->RRTF1(3)                                                            <------NtERF2                                                            --------->ATERF1(1)                                                            --------->RRTF1(1)                                                            --------->RAP2.6(1)                                                            --------->ORA47(2)                                                            --------->DEAR3(2)                                                            --------->DEAR4(2)                                                            --------->ERF1                                                           ------>NtERF2                                                           <---------ATERF1(1)                                                        =======================================bZIP_DOF                                                        --------->ANAC58      <------ZmHOX2a(2)                                                        <---------TGA1a      --------->ARR14(2)                                                        --------->TGA1a      <---------ARR14(2)                     --------->AtLEC2                   --------->ANAC58   --------->ANAC58                   <---------ANAC58                     --------->ANAC46   --------->ANAC58                  <---------ICU4                     ----------->HVH21--------->ANAC46                 <---------ATHB12                <---------CCA1(2)    --------->ANAC58 <---------MYB52(1)<---------ANAC58            <---------MYB52(1)<---------SPL7     <----------DOF2 ->ANAC58       ------>MYB83              --------->MYB52(1)--------->RAP2.3(1)------>ZmHOX2a(2) <--- ->ANAC58       ------>MYB46(1)         <---------MYB52(2)--------->ANAC46------>NtERF2      <-------   accattagtcccaataccaatccttgcaaaattcaaactcaaacaaaccgtttatctcacgcgccgccgtactcgccacgatccgtctttggagaccaat  9548600         --------->DEAR3(1)        --------->ATERF1(1)        <------NtERF2        --------->RAP2.3(1)       --------->At4g35610       --------->LBD16       ------>NtERF2       <---------ATERF1(1)      --------->RAP2.3(2)      --------->RAP2.6(2)      --------->RAP2.3(3)      --------->DEAR3(1)      --------->ATERF1(2)     --------->ORA47(2)     --------->DEAR3(2)     --------->MYB46(3)     --------->RRTF1(1)     --------->RAP2.6(1)     --------->RAP2.3(1)     --------->ATERF1(1)                             ------>ZmHOX2a(2)     --------->DEAR4(2)                             <------ZmHOX2a(2)     <------NtERF2                                 --------->ARR14(2)     <---------ABI4(2)                             <---------ARR14(2)     --------->ERF1                               <------ZmHOX2a(1)    <---------DEAR3(2)    <---------At4g35610                      ----------->HVH21       <------NtERF2    --------->At4g35610                     <-----------HVH21      <---------ANAC46             -----    <---------ATERF1(1)     --------->ZAT14--------->LBD16         <---------DEAR3(1)           <----    <---------RAP2.3(1)<---------ZAT14    --------->LBD16          --------->DEAR3(1)          <----- ------AHL20(2)   <---------ARR14(2)     <---------LBD16     ---------->CDC5                 <------- ----------AGL3   --------->ARR14(2)   --------->PCF5<-------TEIL<-----------HVH21 --------->MYB52(1)   ttatggagccgccgaagggagataccgtagtgaagactgaggtcccggtgaaggatccatcgctaagcgtcgtcgattcgaaaacgaagggagtcgagga  9548700                                  <<<<<<<<<<GATA-1                 ---------->DOF2   --------->ZAT6          ----------->GT1                       ----------->HVH21  <---------ZAT14         <---------TOE2(3)                     <-----------HVH21 ---->ARR14(2)        <---------At4g35610                      --------->LBD16                 ------ -----ARR14(2)        --------->At4g35610                   ------>NtERF2                 <---------HSFB2a(2) -ZmHOX2a(1)      <-----------HVH21                        <---------ALFIN1               --------->HSFB2a(2) --------------WRI1  <---------TOE1(1)                  ----------->HVH21               ----------->RAV1(2)   tgcgaacactgagatagccttgtccgatgaggttgaaatcgagacgaagggaagcgattcgacaccggtgaaagctccgagtcgaacatcgtctggatcg  9548800                                                  <------ZmHOX2a(2)                                                 --------->ARR14(2)                                               --------->LBD16                                             <---------LBD16                               <---------ARR14(2)                                            --------->MYB52(1)                             --------->ARR14(2)                                           <---------ARR14(2)                             <---------CCA1(2)                                           --------->ARR14(2)                            --------->LBD16                                          <------ZmHOX2a(1)                             <---------ANAC55(2)                                          ===============HOX2a_HOX2a                    <---------ANAC46                                        <---------TOE1(2)                         ------>ZmHOX2a(2)                                       <---------LBD16                          <-----------ARR10                                     ------>ZmHOX2a(2)                          <---------AGP1                                    <---------GLK1(1)                           <---------ARR11(3)                                   <---------AGP1<---------ARR14(2)        ----------->RAV1(2)  --------->GLK1(2)                --------->ARR14(2)       <-------TEIL   <---------At4g35610   <--- <---------GLK1(1)                 <---------ARR11(3)    --------->At4g35610    <---------ARR14(2) --------->GLK1(1)  --------->LBD16<---------ARR14(2)    <---------At4g35610    --------->ARR14(2) >ZmHOX2a(2)    <---------GLK1(1) <---------CCA1(2)   ---------->DOF2      --------->At4g35610   <---   aagaaatctgtacattggagccccgaattggtgtctggatctcaggaaccggatcagaaagctgcatcgtcttcttcggctggatctaatccgtatattg  9548900                       <---------HSFB2a(1)                     <---------GLK1(2)                    --------->At4g35610        --------->ZAT2 --------->HSFC1(2)                                                       <----        ----------->RAV1(2)                              <---------ANAC46                       <----        <---------ZAT2 <---------HSFC1(2)           ------>ZmHOX2a(2)                          <-----        --------->At4g35610                     <---------YAB1                                 <-----        <---------At4g35610                   <---------ANAC46             <---------ANAC46    ------      <-----------RAV1(2)  <---------ANAC46 <---------ZAT14          <---------TOE2(3)      <-------- ------ANAC58       <---------At4g35610     --------->ZAT14          <---------YAB1   --------->TOE2(3) ------ANAC58     <-----------RAV1(2)      --------->ALFIN1--------->At5g28300  <---------REM1(1)   ctcgttctccagctgagacttcagatgcttcgttgaaaggtaagagtgttgtgatcgtagcggtgagaattgagattgtgtattgtagccttatttacct  9549000  Previous    Next  AGI:  At2g22475.1    Description:  GEM. Identical to GLABRA2 expression modulator (GEM) [Arabidopsis Thaliana] (GB:Q8S8F8;GB:Q3EBW7;GB:Q8GWY9;GB:Q8LBI8); similar to ABA-responsive protein-related [Arabidopsis thaliana] (TAIR:AT4G40100.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO22364.1); contains InterPro domain GRAM (InterPro:IPR004182) Range:  from: 9548481    to: 9552090    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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