Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                         --------->CCA1(2)                                                                      --------->ARR14(2)                          <---------HSFB2a(1)                         <---------ARR14(2)                          --------->HSFC1(2)                          <---------ARR11(3)                          <---------HSFC1(2)                          --------->ARR11(1)                          --------->At4g35610                         --------->ARR11(3)                  --------->ATHB12               ---------->DOF2    ----------->ARR10    --------->YAB1                 <-------TEIL                <-----------GT1<---------ANAC58   <------NtERF2             <---------YAB1        --------->GLK1(2)        <---------ANAC58   <---------At4g35610       --------->YAB1  <------ZmHOX2a(1)   --------->AHL20(2)<----------DOF2 <---------RAP2.6(2)   aaatgtgaatcatgtatgattcataggaagcttcaagtttctgaatttaacaaaaggaattggctttaccaagatttgggccgcttcttaagcataactc  9508900                                 <---------ARR11(3)                                                <-                       --------->ANAC46                                                     ---------                       --------->ZAT6                 --------->ARR11(3)                   <---------ATHB12                   --------->WRKY38(1)        --------->GLK1(2)                      --------->GLK1(2)                   --------->WRKY12       >>>>>>>>>TBF1    --------->REM1(1)         <-----------ARR10                <---------ANAC46 --------->ARR11(3)   <---------ARR11(3)             <---------ARR11(3) ------->TEIL<-------TEIL    ---------->DOF2 <---------GLK1(2)                       --------->ARR11(3)   atgaactcttaaacgttcgcgttgaacaccacaaagaccttgaagaagaatctcaagagcttcaacatgctgcaaaatccagtagaaaatctaatcaaat  9509000                --------->STY1(1)            --------->ANAC58                                        ----------->GT1   --------->AHL20(2)                                --------->At4g35610                          ---   --------->YAB1                                 ---------->DOF2------->TEIL                  ------ --------YAB1   <---------STY1(1)          ---------->DOF2 ------>ZmHOX2a(2)                --------- >YAB1      --------->ANAC58         --------->YAB1  <---------At4g35610    --------->TOE1(2) <------   tctaataaaaattcaagcctagggtttatcaattggacatcataagaaagctaaaagctgatccatgaactcgaaaaacttgggatttgttcgtcaatca  9509100                                                                                            ---------                                                                                            <--------                                                                                            <--------                                                                                            ---------                                           --------->ANAC46                          ----------->GT1                                           --------->ANAC58                     <---------AHL20(2)                                         <---------ALFIN1             --------->RVE1(1)     <--------             --------->TOE2(2)<---------ANAC58                       --------->ARR11(3)     ---------        <---------MYB52(2)    <---------ANAC46                       <---------ARR11(3)    --------->AHL20(2)      --------->MYB52(1) --------->HSFB2a(1)                         --------->GLK1(2)--------->TOE2(3) ------>AHL20(2)         --------->HSFC1(2)--------->ANAC58    --------->YAB1   --------->AHL20(2) --->YAB1   ----------->RAV1(2)     --------->MYB46(3)    <---------At4g35610  --------->AHL20(2) >WOX13(1) ------->TEIL <---------YAB1 <---------ALFIN1   --------->At4g35610  --------->YAB1 <------ ---ATHB12 --------->GLK1(2)  <---------ANAC58   ----------->HVH21  <---------GLK1(2)--------->YAB1   aaaaatacaaacgaacctgtgtctcgatgattccttgaaccacacactccattgacattgagctatcacaaaatctctcaattaaaatcgtaaatatatt  9509200                     ----------->GT1                    ----------->GT1               --------->LBD16              <---------------AGL15                                    <---------RVE1(1)             ----------------->AGL2                                    <---------CCA1(1)             <-----------------AGL2        ------>ZmHOX2a(1)   <---------ARR14(2)             <-----------------AGL1       --------->TOE2(3)    --------->GLK1(2)        <---------MYB59              <---------HSFC1(2)        <-----------ARR10 >ARR11(3)   ----------------->AG    <---------HSFB2a(1)       <---------ARR11(1) -ARR11(3)   ----------------->AGL1  --------->HSFC1(2)        ------->TEIL        --------->LBD16 -AHL20(1)   <-----------------AG    --------->HSFB2a(1)       --------->ARR14(2)<---------LBD16 >AHL20(2) --------->ARR14(2)     ---------->DOF2             <---------ARR14(1)--------->MYB52(1) -AHL20(2)------>MYB46(1)      <---------TOE2(3)      <---------LBD16 --------->ARR11(3) >AHL20(1)------>MYB83      <---------MYB52(2)       <---------LBD16  <---------ARR11(3)<-----------ARR10 ---GLK1(2)<---------ARR14(2) --------->MYB52(1)     ------>ZmHOX2a(1)*TSS   <-----------GT1     ----   ctcaacaagaccaaatccgaaattggaaaaactaacgaaagcttcctaaatcgtcctcgggagcgaatctgagattttttaacaccggagaattttagct  9509300                                                                             xxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                                                                         <------MYB83                                                                         <------MYB46(1)                                                                         <---------MYB46(3)                                                                       <---------MYB52(1)                                                            xxxxxxxxxxxxxxxxxx>smallRNA(fl3)                                                            xxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                                                            xxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                                                            xxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                                            xxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                                            xxxxxxxxxxxxxxx>smallRNA(fl3)                                                            xxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                                                            xxxxxxxxxxxxxxxxx>smallRNA(fl3)                                                            xxxxxxxxxxxxxxxx>smallRNA(fl3)                                                            xxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                                            xxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                                                            xxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                                            xxxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                                                            xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(s2)                                                            xxxxxxxxxxxxxxx>smallRNA(si3)                                                            xxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                                            xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                                            xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                                            xxxxxxxxxxxxxxxxx>smallRNA(si3)                                                            xxxxxxxxxxxxxxxxxx>smallRNA(si3)                                                            xxxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                                            xxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                                            xxxxxxxxxxxxxxxxxxx>smallRNA(se3)                                                            xxxxxxxxxxxxxxx>smallRNA(se3)                                                            xxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                                                            xxxxxxxxxxxxxxxxxx>smallRNA(se3)                                                            xxxxxxxxxxxxxxxx>smallRNA(se3)                                                            xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                                                            xxxxxxxxxxxxxxxxx>smallRNA(se3)                                                            xxxxxxxxxxxxxxx>smallRNA(le3)                                                            xxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                                                            xxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                                                            xxxxxxxxxxxxxxxxxxx>smallRNA(s2)                                                            xxxxxxxxxxxxxxxxxxxx>smallRNA(s2)                                                            *TSS    <-----------RAV1(2)                                                            xxxxxxxxxxxxxxxxxxx>smallRNA(i2)                                                            xxxxxxxxxxxxxxxx>smallRNA(i)                                                            xxxxxxxxxxxxxxxx>smallRNA(s)                                                --------->ANAC58 --------->At4g35610<---------ANAC46                                                --------->ANAC58 <---------At4g35610<---------ANAC58                                               --------->DAG2   xxxxxxxxxxxxxxx>smallRNA(le3)                                     <---------At4g35610    xxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                                     --------->At4g35610    xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                                    --------->MYB52(2)    <---------ANAC46<-------GAMYB   --------->HSFB2a(2)          --------->MYB111(1)XXXXXXXXXXXXXXXXXXXX>MIR844      <---------ANAC58x ------->GT1            <-----------TBP       ---------->DOF2xxxxxxxxxxxxxxxx>smallRNA(s)           x   agttactagaatcacttgtgtagttgttatatagtagttagctgtagataaagcaagatggcctattagctcagttggttagagcgtcgtgctaataacg  9509400                 <-----------------AGL1                 ----------------->AGL1               xxxxxxxxxxxxxxxx>smallRNA(s)         <---------DAG2               <------ZmHOX2a(2)                    <----------DOF2             xxxxxxxxxxxxxxxx>smallRNA(s)          --------------->AGL15            xxxxxxxxxxxxxxxx>smallRNA(s)           <---------------AGL15           <-------TEIL                            <---------DAG2           xxxxxxxxxxxxxxxx>smallRNA(s)           ----------------->AGL3        xxxxxxxxxxxxxxxx>smallRNA(se3)            <-----------------AG       <---------TOE2(2)               <-----------GT1       <---------TOE1(2)           <---------MYB52(1)                  <---------YAB1      <-----------RAV1(2)        <---------ANAC58 <-----------------AGL1   --------->YAB1   ----------->HVH21     --------->ANAC46  <-----------RAV1(1)       --------->YAB1             -----  <-----------HVH21   --------->ARR14(2) <---------ANAC58           <------ZmHOX2a(2)          <----- xxxxxxxxxxxxxx>smallRNA(se3)    <---------ANAC58 <-----------------AGL3--------->YAB1   ------->TEIL xxxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3) <---------ANAC58     --------->GLK1(1)        <---------ZAT18   cgaaggtcacaggttcgatccctgtataggccatttcgttttttcttgttgccccttttttgggaactcgatcataataaaaactctagtgcatctcggt  9509500                                                                                           <------MYB46(1)                                                                                           <------MYB83                                                                                          --------->MYB46(2)                                                                      --------->LBD16     --------->MYB111(1)                                              <---------YAB1        <---------LBD16     <---------MYB52(1)       <---------ZAT6    <---------MYB52(1)--------->ICU4  --------->MYB52(1)       --------->ICU4 --------->ATHB12---------->DOF2        <------NtERF2     ------->GAMYB         <-----------TGA1 ---->WRKY18(1) ------>MYB46(1) --------->MYB52(2)       --------->MYB46(3)     <-----------HVH21 ------HVH21    ------>MYB83--------->At4g35610          <---------MYB55(2)<---------ZAT14--------->MYB59   cattgattagtgatcaccaaatagcccattagcttagttggccgcatgatgagaacataaccaccggttaaccggagtaaaccgtcattagttaggttga  9509600                                                  ------>MYB46(1)                                                  ------>MYB83                                          --------->TOE1(3)                                  <-------TEIL  --------->TOE2(3)                              --------->DAG2    <---------MYB59                         --------->DAG2                             ---------->DOF2   ----------------->AG                    ---------->DOF2                     <----------DOF2    ------->TEIL <---------AHL20(2)  <---------WRKY12         ---   agatagaatttagtttgtgctatctttgctaaaaagttcatgaaccctaacctaattagttggcattttaagaagtcaactagtttcgataaagtttatg  9509700                                                 --------->At5g28300                                                <---------ZAT6                      ----------->GT1       <---------YAB1               <---------AHL20(2)        <---------YAB1                              <---------YAB1               --------->AHL20(2)    <-------GAMYB                                ------>ZmHOX2a(1)          --------->ARR11(3)         <---------ANAC58                            --------->TOE2(3)         --------->YAB1              <---------ANAC58                            <---------ANAC46---- ---->TEIL<---------ARR11(3)        <---------MYB46(3)                  ----------->GT1          ----   aacatagcaaatgatatttatatatggttatttcatcttggttgtgattactgtaaatgtctactaagtagaatgtgttaattccttataattgttgaca  9509800  Previous    Next  AGI:  At2g22370.1    Description:  similar to unnamed protein product [Vitis vinifera] (GB:CAO61240.1) Range:  from: 9507895    to: 9509270    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At2g22380.1    Description:  pre-tRNA. tRNA-Ile (anticodon: AAT) Range:  from: 9509360    to: 9509433    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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