Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100             --------->DEAR3(1)          --------->MYB46(3)          <------------AtMYB77        ------->GAMYB       --------->MYB46(3)       <---------MYB55(2)       <---------MYB52(2)      ------>MYB46(1)      ------>MYB83    --------->AtMYB61   --------->MYB46(3)  --------->ATHB12 ---------ETT(1)     >>>>>>>>>>>>>>>>>LFY    ------->GAMYB ------->SPL7      <-----------------AGL1   --------->ANAC46 --------HVH21   --------->ARR14(2)        >>>>>>>>>MYB2              <-----------GT1<---------TOE2(3) ------SPL7------->GAMYB            <----------DOF2                 --------->AHL20(2) -----ANAC58   <---------DEAR3(2)  <---------ANAC58                 <---------AHL20(2)   --------->GLK1(1) -----ANAC58 <---------MYB52(1)    <---------ANAC58       <---------ATHB12     <---------YAB1     --- -----ANAC46<-----------HVH21   <-------PIF5--------->ANAC58       <---------ATHB12 ---------->DOF2 >LBD16<---------MYB111(2)      ------->PIF5--------->ANAC58 ------->TEIL    <----------DOF2      ---   gtccgaccaacaaccgtcgtttccaccattggcacttgctttagcaacgccaaaaatccaatgaatccaattaaacgagctttgattaaagaaatctaaa  9502100                                                         <---------AHL20(2)          <---------ARR11(3)                             <---------ATHB51          --------->ARR11(3)                          --------->AHL20(2)         --------->CCA1(1)                           --------->AHL20(2)     <---------ARR11(3)                              <---------AHL20(2)             --------->ANAC58     --------->ARR11(3)                          --------->AHL20(2)                 --------->ANAC58    --------->YAB1          --------->ARR11(3)   <---------AHL20(2)      --------->YAB1     --------- ---------->DOF2        ---------->DOF2       --------->YAB1         --------->AHL20(2)    ---------- ------>TOE2(3)     --------->ANAC58        --------->ANAC58         <---------AHL20(2)---------->DOF2 ------>TOE1(3)     --------->ANAC58        --------->ANAC58<---------YAB1        ---------->DOF2 <--   ccttaaagataatatctagggaacccaaaagctctagtctttagacaagaattatataaattattcttcaatttatcaaaattcaaaagcaaaggggaaa  9502200                                           <---------LBD16                                          --------->MYB52(1)                                         <---------ALFIN1                                <---------DEAR3(2)                                <------MYB83                                <------MYB46(1)     --------->ATHB12           <---------MYB46(3)    <---------YAB1             <---------DEAR3(1)                  <----------DOF2 <---------DAG2               <---------ORA47(1)         ----------->GT1   <------ZmHOX2a(1)       -- <----------DOF2            <---------MYB46(3)         --------->DAG2    <---------TOE2(2)         <- -->GT1                    <---------AtMYB61 --------->LBD16 --------->GLK1(1)                     -- ->GT1               --------->DAG2     --------->MYB46(3)   <---------GLK1(1)  ----------------->AGL1 ---------GT1       ---------->DOF2   <-----------GT1---------->DOF2  --------->YAB1           ------   taacttttcattgaagcttcaaaaaagtgatggtcggtttgtaccaccggagattaaaaggggaaatcactttcataggatggccagtttgggcttcaca  9502300                                                       <---------ANAC46                                                       <---------ANAC58         <------ZmHOX2a(1)                                                       <---------ANAC58   <---------YAB1                                                   --------->HSFC1(2)  <---------AHL20(2)                                                   --------->HSFB2a(1) --------->AHL20(2)                                                   <---------HSFB2a(1)--------->AHL20(2)   ----------                                                   <---------HSFC1(2) <---------AHL20(1)  <---------WOX13(1)      <---------YAB1                             <------NtERF2        <---------AHL20(2) <----------- ------->ZAT14                                  --------->LBD16       --------->AHL20(1)--------->ATHB12 --------ZAT14                           <---------MYB52(1)      --------->AHL20(1)    <---------AHL20(2) ---------->CBF             --------->GLK1(1)   <------NtERF2    --------->AHL20(2)    --------->AHL20(2) --->ZAT6    <---------TOE1(3) <-------TEIL   <---------LBD16    <---------AHL20(2)------>ZmHOX2a(2)<   ctgcaattttcatttaagcttcgaaatcggagattcatgaaacgtttggccggagtttcgagcaaaataaaataaaattataggatcgattaattgacag  9502400                                                                                <------------CBF                                                                               --------->ATHB12                                                                              --------->AHL20(2)                                                                    --------->WRKY18(1)                                                                    ------------>CBF                                                    <---------HSFB2a(2)       <---------AHL20(2)                                   <---------At4g35610             <-----------HVH21                                   --------->At4g35610          ------->TEIL  <---------YAB1                                  <---------AGP1    --------->HSFB2a(2)    <----------DOF2                        ------------>CBF       --------->ARR11(3)  --------->At5g28300                       <-----------GT1     ---------->DOF2  <---------------AtSPL3 ->HVH21    --------->At4g35610--------->HSFB2a(2)--------->HSFB2a(2)<---------WRKY38(1)            - -CBF       <---------At4g35610<---------HSFB2a(2)<---------HSFB2a(2)<---------WRKY12 <---------WOX13(1) ---------AtMYB61      --------->YAB1<---------ANAC46       <---------------AtSPL8   <------------CBF   agatggtgttgttcagctaagaaaatcacaattctagagctgtgtaaaagttctcgagaaaaaatgtacggtcaatgcttttaattggattgaaacttgt  9502500                                                                       --------------->AGL15                                                                       <---------------AGL15                                                                    --------->ARR11(3)<---------YAB1                                                                ---------->DOF2     --------->YAB1                                                              --------->YAB1       --------->ICU4                              --------->AHL20(2)             <---------ATHB12      <---------YAB1                              <---------AHL20(1)       <---------TOE1(3)           <---------ATHB12                              --------->AHL20(1)       <---------TOE2(3)  <---------DAG2          <------ZmHOX2a(1)   <---------AHL20(2) --------------->AGL15===============================         ----------->GT1   <---------------AGL15 =======================================MADS_MADS        <---------TOE2(3)  ======================================MADS_MADS<----------DOF2 <---------ICU4        <---------TOE1(3)------------>CBF        <---------------AGL15----------------->AGL3 -------->ANAC55(2)  ------->TEIL               <-----------------AGL1<-----------------AGL2   ------   ttatgtgattaaggaaaataatgtattttcaataaaatgaaattgtctattcttgttaaggcaatgaaaagttctacttttagcaatgataatcagtaaa  9502600                                                         <---------AHL20(2)                                                         --------->AHL20(2)                                                       <---------AHL20(2)                                                       --------->AHL20(2)                                                     --------->AHL20(2)                                                   <---------AHL20(2)                                                   --------->AHL20(2)                                                 <---------AHL20(2)                                                 --------->AHL20(2)          <---------ANAC58                                               --------->AHL20(2)           <---------MYB46(3)                                               <---------AHL20(2)     --------->AHL20(2)                  ------>ZmHOX2a(2)          <---------AHL20(2)  --------->AHL20(2)             <---------WOX13(1)            --------->AHL20(2)    <---------AHL20(2)          ===============HOX2a_HOX2a       <---------AHL20(2)  <---------AHL20(2)         <---------MYB59                 --------->AHL20(2)  --------->AHL20(2)        --------->ANAC46        ----------------->AG            <---------AHL20(1)   <---------AHL20(2)     <---------ARR14(2)       ---------->ID1                   --------->AHL20(1) <---------AHL20(2)<---------ANAC46      <-----------GT1                   <---------ARR11(3) --------->AHL20(2)<---------ANAC58 =========================MADS_MADS --------->REM1(1)<---------AHL20(2)<---------AHL20(2) <---------ANAC46 ---->DOF2------>ZmHOX2a(1)  ---------->DOF2 --------->AHL20(2)--------->AHL20(2)   --------->ARR14(2)   agggagtttttcctaattgatccatgttttctaaagctacaatatatatatatatatatatatatatatatataaaattggttgtatatatgccatgtaa  9502700                                                                                                -----                                                                           <<<<<<<<<<<<<<<<<LFY <----                                   <-----------GT1                       <------ZmHOX2a(1)     <-----                              <------ZmHOX2a(1)                         --------->ANAC58       ------                         --------->ALFIN1                               --------->ANAC58    ---------                         <---------REM1(1)                     <---------AHL20(2)           <--------                       <---------ANAC46                 <-----------GT1 --------->ANAC46  --------->CCA1(2)                     --------------->AGL15        ---------->DOF2     <---------AtLEC2  <<<<<<<<<RAP2.2   tacagaaaccgatagaagcgttgctaagtgtaggatttttcatttttgactcaaaagttaactatattatttgcaggaaacaatggatttagatatgatt  9502800 ---->ATHB12 -----ICU4                                --------->ANAC58 ----YAB1                                 --------->ANAC58                                        --- --->ICU4                                 --------->ANAC46                                        --- >ICU4     --------->KAN4(1)         ------->TEIL                             <------ZmHOX2a(1)------ -YAB1    <---------KAN4(2)  <---------At4g35610   --------->REM1(2)<---------LBD16            ------   attgcattgcagaatgttcagaacattttttagatgatgtatgcaagccagtgtgtatagacaaggggtactcggatggaggatgtattggtttagcacc  9502900                                             ----------->GT1       <-----------RAV1(1)               <---------YAB1               <---------ARR11(3)   --------->AHL20(2)                   <----------DOF2               --------->ARR11(3)   <---------AHL20(2)                 <---------------AGL15          <---------GLK1(1) --->MYB83                           --------->GLK1(2)               <---------CCA1(2) --->MYB46(1)                      <---------ATHB12        ----------->GT1 --->ANAC58            --------->ATHB12<---------ICU4     <---------AtMYB61                    ------ --->ANAC58           <---------YAB1--------->YAB1     --------->ALFIN1                       -------   aaattttaaatgttgttgtaagaaatgatagaaaccaataatctttatagtaaaacggtgatggtgatttgatatcttgtatgttcttcgatgaaataaa  9503000  Previous    Next  AGI:  At2g22345.1    Description:  similar to LCR84 (Low-molecular-weight cysteine-rich 84) [Arabidopsis thaliana] (TAIR:AT2G14365.1) Range:  from: 9502537    to: 9502928    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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