Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100       ----------->RAV1(1)    <---------ETT(1)   <------NtERF2 -----------HVH21 -------MYB46(3) -----WOX13(1) ->ATHB1 -->YAB1 --ATHB1                                                                             <-----------GT1 -->ATHB12                                                                   --------->ANAC46 ------ATHB5                            <---------WOX13(1)                   --------->ANAC58 ---ICU4                              --------->ATHB12                       --------->ANAC58 --ATHB51                   --------->DEAR3(1)                        --------->ANAC58 --YAB1                    --------->ANAC58                           --------->ANAC58 ->ICU4                    --------->ANAC58                           --------->ANAC46          ----- --ATHB12                  --------->ANAC46                       <-----------HVH21<----------DOF2 ->ATHB5              <-----------GT1<---------YAB1              <----------DOF2   <---------DAG2   tgggtcgcgacaaaatactacatattaccacggccctatatgattgaactcgaatagaaaatgacgactttcaggccataagccactttaccatgttttc  9498400                                                                                                    -                                                                                                    <                                                                                      --------->MYB111(1)                                                                                      --------->MYB59                                                                                      --------->MYB46(2)                                                                                      --------->MYB111(2)                                                                                      --------->MYB52(2)                                                                                    <---------MYB52(1)                                           <----------DOF2                         ------------>MYB.PH3(2)                                          <---------DAG2                          <---------ZAT6    < ----------->RAV1(2)             --------->HSFB2a(2)                        ------->TEIL    <------ZmHOX2a(1) ---->TOE2(3)          <-------TEIL <---------GLK1(2)                 --------->TOE1(2)   --------->MYB59   ttaacctggttttagcaaaattagattcagttcttacagaatagccttttcggacaaaaatgtccctacaatcgaacgaatgtacagttagttaggaaat  9498500          <---------ARR11(3)   --------->LBD16          --------->ARR11(3)  <---------ANAC58         --------->GLK1(1)    <---------ANAC58                                              ---------         <---------GLK1(1)    <---------ANAC46                                          ---------->DOF2    <-------TEIL   <---------At4g35610                                       --------->AHL20(2)  <--- -------->MYB59    --------->At4g35610                                       <---------AHL20(2) ----- ---------TOE2(3) --------->MYB52(2)           <-----------GT1        >>>>>>>>>TBF1  --------->AHL20(2) ---------------AtSPL8<-------TEIL           <---------AHL20(2)---------->DOF2---------->DOF2--------   tttaggtacagaaatcttgttagctacatagtccgtgttttgttgattttatcgatgctacattgtaaagaagaagaaattaaagaattaaaaagatgct  9498600                                                                                 --------->ARR11(3)                                                                                 --------->AHL20(1)                                                                                 <---------AHL20(1)                                                                             <---------YAB1                                                                           --------->YAB1                                                                           -------->HAHB4                                                                           <--------HAHB4                                                                           -------->ATHB1                                                                           --------->ATHB51                                                                           <---------AHL20(2)                                                                           <---------ICU4                                                    -------->P            <---------ATHB51      ----------->GT1                               ------>MYB46(1)       --------->ICU4     <---------TOE2(3)                 <---------YAB1--------->ZAT6    --------->AHL20(2)     <---------TOE1(3)           ------->TEIL  <-----------GT1       --------->TOE2(3)     <---------ANAC55(2) >ARR11(3)              --------->DOF5.7(2) --------->YAB1  <---------AHL20(2)--------->AHL20(2) ----GAMYB             --------->TOE2(3)   --------->AHL20(2)  --------->AtLEC2<---------AHL20(2) ------>GT1    --------->At4g35610<---------ICU4    ------>MYB83     --------->YAB1<------------CBF ->GLK1(2) <-----------GT1  <---------AtLEC2<---------ICU4  <---------ICU4<---------YAB1   --------->ANAC55(2)   gttaaataaggtttaacagctaaaacgtttacatgaacatgaccattaattaccaactctaattaatgcaaacttaattattatatattgtatacgtata  9498700                                                                                   ---------->DOF2                                                                                <---------HSFB2a(2)                                                                           <------MYB46(1)                                                                           <------MYB83                                                                          --------->MYB59                                                                          --------->MYB46(2)                                                                          <---------MYB46(3)                                                                    ==============================HOX2a_HOX2a                                                                    ------>ZmHOX2a(2)                                                                  <---------ARR11(3)        ---------                                                    ----------->GT1*TSS   --------->MYB111(1)     <--                                               <------ZmHOX2a(1)  --------->ARR11(3)        <--------           ---------->DOF2       <-------TEIL  ============================HOX2a_HOX2a     <------ZmHOX2a(1)      --------->AHL20(2) <----------ID1    --------->TOE1(2)  <------------CBF  --------->HSFB2a(2)   agagtgttttaaataaagaaacttaaaaaaacaaattcatatgaacgaaggagatggtgaagaatattgatcttgtttggtactggaaagagaggatgtg  9498800                                                                     --------->AHL20(2)                                 <---------YAB1                      <---------AHL20(2)                                <---------ARR11(3)      <---------------AGL15                              <---------YAB1            --------------->AGL15                         ------->GAMYB                  <----------DOF2    --------->MYB52(1) >ARR14(2)              --------->MYB46(3)             ----------------->AGL2   <---------ARR14(2) --------DOF2     <---------YAB1--------->ARR11(3)     <-----------------AGL3   <---------GLK1(2) -ARR14(2)      ----------->GT1--------->YAB1<----------DOF2   ----------->GT1  --------->ARR14(2)   cttctctggccttaggcatggtgataaccaccatgatatttgtgaggcttttgcaatgctttaagtggaaattaaactagcagattgtgagacactgttg  9498900                 <---------AHL20(2)                <---------AHL20(2)                --------->ARR11(3)                --------->AHL20(2)                <---------ARR11(3)                <---------AHL20(1)                --------->AHL20(1)       --------->GLK1(1)            <------MYB46(1)          --------->ANAC58          ---------->DOF2                   <------MYB83          --------->ANAC46       <----------ID1               <-------GAMYB          --------->ANAC58    --------->DAG2     <---------ICU4      --------->MYB59        <-----------GT1      ---------->DOF2    <---------ATHB12 --------->ATHB12   aaccaagaattcacacaatatatttgtttaaaaaagggaaaagaaatctaatcaattctcttgctgttgatttggtctaaaacttgattcaacgagatta  9499000                                                  <---------TOE2(3)           ------>ZmHOX2a(1)                                              --------->YAB1              <---------ARR14(2)                                           --------->AHL20(2)             --------->ARR14(2)                                           --------->YAB1                <---------GLK1(1)     <----------DOF2                      <---------AHL20(2)             --------->GLK1(1)    <---------ANAC58         ---------->DOF2--------->AHL20(1)           <---------CCA1(2)    <---------ANAC46<---------TOE2(3)  --------->AHL20(2)              <---------ANAC58  <------ZmHOX2a(1)    <---------ANAC58<---------TOE1(3) --------->AHL20(2)               <---------ANAC58 <----------ID1   gagattgctttgaaaacaagttagggtttgctaaagaacaataaataatattaagttttttttgtattaagttgcatatcctttgaatagaggacaaatt  9499100                    ---------->DOF2          --------->YAB1                --------->ANAC46                     --------------------->WRI1      --------->AHL20(2)     <-------TEIL                             ----------------------->TaNAC69(2)      <---------AHL20(2)    <-----------HVH21     ------>ZmHOX2a(1)------->TEIL   <---------ZAT18     --------->AHL20(2)   <---------DEAR3(2)     --------->TOE2(3)<---------CCA1(2)   ccctctatttaattatactactaaaagacggttcagcgataaactcaacttccttactcttcgagtttgaatctttgatttttgttcgcttctcagaata  9499200                                          ----------------->AGL1                                          <-----------------AGL1                                          ------>MYB46(1)                                        --------->AtMYB61                                     ------>MYB83                                ---------->DOF2                    ------>NtERF2              ------>MYB46(1)                               <---------MYB52(1)              --------->DAG2               <--------                              <-------GAMYB                  ---------->DOF2                ---------           <---------ANAC58  <------MYB83 ------>MYB83   --------->ANAC58                  --------->At4g35610           <---------ANAC58  <------MYB46(1)  --------->MYB52(1)  ----------->HVH21        <---------At4g35610        <----------DOF2      <---------MYB46(3)          --------->ANAC46             <---------At4g35610     <-----------GT1         <---------DEAR3(2)          --------->ANAC58         --------->ALFIN1   ggtagttttactttcttacgagtttagaagtcggttaagcgacctcccaaacgggaaacaggccaaaggcgacctgttattggggttttgctcaccagcc  9499300  Previous    Next  AGI:  At2g22335.1    Description:  pseudogene of cytochrome P450 family protein Range:  from: 9498767    to: 9499533    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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