Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                  --------->WOX13(1)                         --------->ICU4 --------->AHL20(2)                                         <-                    ----------->GT1   --------->AHL20(2)                                     <-------                    --------->ANAC55(2) <---------AHL20(2)                         <<<<<<<<<<<<<<<<<LFY                   --------->MYB59    <---------AHL20(2)                      <---------ARR11(3)   --                   <---------TOE2(3)<---------AHL20(2)                        --------->GLK1(2)    <-         <---------HSFB2a(2)        --------->AHL20(2)                       --------->RVE1(1)     <-         --------->HSFB2a(2)      --------->AHL20(2)                       --------->AHL20(2)--------   tcttctgttttatagaaaatttaggtaatatttcatatatatatatatatcactcagaaattacacaaatattcaaaaaaaatctgaacattgggagcaa  9478100                                                                                           --------->GLK1(2)                      <---------AHL20(2)                                                  <---------GLK1(2) --------DAG2     --------->YAB1                                   --------->YAB1        --------->At4g35610 --At4g35610     <------ZmHOX2a(2)  --------->LBD16    --------->ICU4          <---------ZAT2 ------------->AGL15  --------->AHL20(2)               <---------YAB1          --------->ZAT2 ---------DOF2  --------->ARR11(3)  <---------MYB52(1)<---------ANAC55(2)      <---------At4g35610 --------------AGL15 --------->AHL20(2)         --------->AHL20(2) --------->AHL20(2)  --------->YAB1 ->At4g35610    <---------ARR11(3) --------->ANAC46   --------->ANAC55(2)      --------->At4g35610   actttttgaagcaaatcagatcataaaattagataacccgtagttacaaaaaaaatacttattgttctataatataaactcagctctaatcagattccat  9478200                    <---------RVE1(1)                    <---------CCA1(1)                   <---------AHL20(1)                   --------->AHL20(1)                                                            <---                   --------->ARR11(3)                                                            <---                   <---------ARR11(3)                                                           <----               ---------->DOF2                                                                  -----          --------------->AGL15                                                                 -----          ------->GAMYB                   --------->AHL20(2)                             --------->At4g35610          <---------------AGL15      <---------ARR11(3)                             --------->DAG2        <---------At5g28300          --------->ARR11(3)             ----------->GT1==================       <-----------GT1         <-----------GT1                 <------ZmHOX2a(1)   ---------->DOF2   ttgctaatttaaccgtataaagatatttctaatttacaagattttaaaatacgagaatgacagtaggaattagaaaaaactaatataaagcagaagaata  9478300          ------->MYC3          <-------MYC3          <-------MYC2          ------->MYC2         <---------O2         --------->TGA1a         <---------TGA1a         --------->ANAC55(1)         --------->ANAC55(2)         --------->ANAC58         --------->O2         ----------->GT1         <---------ANAC55(2)                                                                  -------         --------->ANAC58                   <---------YAB1                                   <-------         --------->ANAC46                 --------->ZAT6                                     --------       <---------ALFIN1        ----------->GT1                                               <-------      <---------REM1(2)       <---------ATHB12                                               --------  --------->TOE2(3)      >>>>>>>>>>>>>>>>>LFY                                                -------- --------->YAB1          <<<<<<<<<<<<<<<<<LFY                                                -------- ------YAB1            <-----------GT1 <---------AHL20(2)                                    -------- ------AHL20(2)     --------->YAB1    <---------AHL20(2)                                     -------- -----AHL20(1)      <---------ICU4    --------->AHL20(2)              --------->ANAC58      <-------- ---->AHL20(1)    --------->AHL20(2)  <---------AHL20(1)              --------->ANAC58---------->DOF2 ---->AHL20(2) --------->AHL20(2)     --------->AHL20(1)        <---------ATHB12  --------->DAG2<---- ==================bZIP_DOF --------->MYB52(1)                --------->WOX13(1)---------->DOF2 -----   taatcgtcaacacgtgataaaataataacccaatggataatttaatactattacagaaccaaaacaatcaataagcaaaaaaaaaaggcaaagtcccgga  9478400       <---------At4g35610     <-----------RAV1(2)   <-----------TGA1                                                            <---------CCA1(2)   <-----------HVH21                                                         ------>ZmHOX2a(1)  <---------ANAC58                                                           <---------CCA1(2)  <---------ANAC46                                                       --------->GLK1(1)  <---------ANAC58                                                      --------->ARR14(2) -->LBD16                                                            --------->ANAC58            <--- --ANAC55(2)                                                         --------->ANAC58            <--- ->LBD16                                                            --------->SPL1(2)           <---- --HSFB2a(2)                                                        *TSS<---------GLK1(2)       ----- ->ANAC46                                                           --------->SPL7              ----- ->HSFB2a(2)                                                       --------->SPL1(1)            <---- ->ANAC58                                                         <---------SPL7              <------ ->ANAC55(2)                                                     --------->TOE1(1)           <------- ->ANAC58                          ------------>CBF              --------->TOE2(1)  --------->ZAT6 -LBD16--------->At4g35610     --------->AHL20(2)               <---------------AtSPL3  --------->ZAT14 -----ARR14(2)           ----------->GT1             <---------AHL20(2) <---------ARR14(2)   -------- ---->ARR14(2)         ---------->DOF2        ------>NtERF2    <------------------SPL14 <---------ZAT14   acttgcgtcagaagaattttgactagaaagaaaaaaaatcaatttcgacggccatttttttctctcatcgtacggattcctatctctcactactcagatg  9478500          <----------DOF2 ------ANAC58 ------ANAC58 -----HSFB2a(1) ---->HSFB2a(1)               <-----------GT1 ---->HSFC1(2)       <----------DOF2                  ------>ZmHOX2a(1)                        >>>>>> -----HSFC1(2)       <---------DAG2            <---------YAB1                               >>>>>>>>>TBF1 ---GLK1(2)         <---------DAG2         <---------DAG2                                >>>>>>>>>TBF1 --At4g35610    <-----------GT1            <----------DOF2                            >>>>>>>>>TBF1 ->At4g35610 --------->YAB1<------------------------ANAC81   <-----------GT1       >>>>>>>>>TBF1   cttccttcttcactttaatcacccttttcgattttcgttttccagctttttgattcctctgtttcaccaagtagacgaagtagaagaagaagaagaagaa  9478600                                                                                   --------->ANAC58                                                                               <---------ANAC46                                                                       <---------ARR11(3)                                                                       --------->ARR11(3)                   ---------->DOF2                               --------->ANAC58  --------->ANAC58              --------->ZAT6                                     --------->ANAC58<------NtERF2          <----------DOF2    <---------DAG2                    ---------->DOF2 <---------ANAC58      <-----------GT1        <----------DOF2              ------>ZmHOX2a(2)    <---------ANAC58  <--- >>>TBF1 <---------DAG2   <-----------GT1 <----------DOF2<------ZmHOX2a(2)    <---------LBD16    ----   gaaagttttcacctttactctaaaagtttcactttttatgtctgctttgaagctctgagatcggagaaagcaatatctatggcggaagcaagacgattca  9478700                                                                   --------->ALFIN1                                                                 <---------ANAC58              <---------ANAC55(2)                                <---------ANAC46              <------MYB83                                       <---------ANAC58              <------MYB46(1)                                <---------ANAC58      <----------DOF2 <-              <---------ANAC46                               <---------ANAC58   <---------ARR11(1) <-             --------->MYB46(2)                      <---------CCA1(1)          --------->ARR11(3) <-             --------->MYB59                         <---------RVE1(1)         <---------CCA1(2)   <- ------At4g35610       ---------->DOF2              --------->ARR11(3)<---------PCF2               <- ----->At4g35610   <---------ANAC46<----------DOF2  <---------ARR11(3)<-----------HVH21     <------ZmHOX2a(2)   gcccagttcatgaattaggtgaagtgaaagttttcttctttctgtagtatttgagatatttttgtttgcgtgggtcaaatcaaatctttatccgatctat  9478800                                                                                    <---------ANAC58                                                                                    <---------ANAC58                                                                                    <---------ANAC46                                                                              --------->ATHB12                                                                              --------->ATHB51                                                                              <---------ICU4                                                                              -------->ATHB1 <---------ANAC58                                                            <---------YAB1   ------- <---------ANAC46                                                            --------->ICU4  -------- <---------ANAC58                                                          --------------->AGL15 --------ANAC58                     --------->YAB1                         <---------------AGL15 -----MYB83                         <---------ICU4                        <-----------------AGL2 --------ANAC58                    <---------ATHB12                       ----------------->AGL3 -----MYB46(1)           ---------->DOF2 <<<<<<<<<GATA-1                <-----------GT1      <------- --------ANAC46        <---------YAB1<----------DOF2       ---------->DOF2<-----------------AGL3   ttggtgtgagtattggtatatagtcatcaaagtttcaatctttatctattggaatctattcaaaagggcatttttatccattattggtgtgagtgatgat  9478900                                                                                                 ----                                                                         ------->TEIL<---------ATHB12                                          --------->ICU4                 <-----------ARR10       <---                                --------->YAB1                           <---------ARR11(1)    <----- -->ATHB12                      <---------ICU4       --------->ANAC55(2) --------->GLK1(2)    <------ ->ICU4                        <-------TEIL<---------ICU4               <---------ARR14(1) <-------TEIL --YAB1            <---------AHL20(2)    --------->ANAC55(2)        --------->MYB52(1)--------->YAB1   ttgttcttgttgaaagtatattttatctgaatattcatcacttacttattagtttacttatccaagttgataacgaatctattctaaatcatgttcatca  9479000  Previous    Next  AGI:  At2g22300.1    Description:  ethylene-responsive calmodulin-binding protein, putative (SR1). Identical to Calmodulin-binding transcription activator 3 (CMTA3) [Arabidopsis Thaliana] (GB:Q8GSA7;GB:Q9FPR9;GB:Q9SID7); similar to calmodulin-binding protein [Arabidopsis thaliana] (TAIR:AT5G64220.1); similar to calmodulin-binding protein [Arabidopsis thaliana] (TAIR:AT5G64220.2); similar to EICBP.B (ETHYLENE INDUCED CALMODULIN BINDING PROTEIN) [Arabidopsis thaliana] (TAIR:AT5G09410.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO66952.1); similar to hypothetical protein OsJ_030088 [Oryza sativa (japonica cultivar-group)] (GB:EAZ15879.1); similar to Putative cal Range:  from: 9478468    to: 9483726    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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