Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100              --------->ARR11(3)            <---------ARR11(3)                                                             --------->AHL20(2)           <---------CCA1(2)       <---------YAB1                                        --------->ANAC58        <---------AHL20(1)      --------->AHL20(2)                                       --------->ANAC58        --------->AHL20(1)    ----------->GT1                                            <---------ANAC55(2)       --------->AHL20(2)    --------->DAG2                                           <------ZmHOX2a(2) ---------->GT1             ---------->DOF2                   ----------->GT1         =============== ----->CCA1(2)          --------->YAB1                    --------->GLK1(2)   <---------ATHB12   tatgggaaaatatatatctatagctataaaaaaagttaatattcttaaggcattaggcataatctagttaatagactccaatcttgggatcaagtaaatg  9467800           --------->YAB1            <---------WOX13(1)              ------->GAMYB        <------ZmHOX2a(1)     <---------ANAC58                      --------->MYB46(3)       --------->ICU4    <----------DOF2                   <------ZmHOX2a(2)               <---------MYB59      <---------TOE2(3)--------->HSFC1(2)                --------->YAB1         ------>NtERF2  --------->YAB1       <---------HSFC1(2)   --------->HSFB2a(2)   ----------->RAV1(1)     <---------ANAC55(2) ==============HOX2a_HOX2a    <---------ANAC58  <---------KAN4(2)--------->MYB46(3)       --------->ANAC55(2)   cctaaaataaggattataacttagaagctttggagtgagattgctacgagaataaacaaggatcacaacaacagacactcgatgccaaacttacttaact  9467900                                                    --------->ANAC58                                                    --------->ANAC58                                                --------->ANAC58                                                --------->ANAC58                                             <------ZmHOX2a(1)                                          <---------LBD16                                         <-------TEIL<---------MYB52(2)                                        --------->GLK1(2)         <---------ARR11(3)                                       --------->ARR14(2)   --------->ANAC58                  <------ZmHOX2a(1)                                       <---------GLK1(2)    --------->ANAC58                 <-------                                   <------ZmHOX2a(2)----------->GT1  <----------DOF2        ---------                                   =================HOX2a_HOX2a   --------->ARR11(3)    *TSS---------                             --------->TOE1(2)---------->DOF2   --------->ANAC58       <----------ID1   <---------AHL20(2)      ------->TEIL<---------ARR14(2)<---------MYB52(2)          ---------->DOF2   --------->AHL20(2)   <---------MYB52(2)<-----------RAV1(2)   --------->ANAC58 ---------->DOF2   cttaatttaacaaggagagaagagaaacgaaccagggatcagattcaggaaagcaagtaactaagcaagctcttttggagaagaaaagaaagacaaggac  9468000                                                                --------->SPL7                              <----------DOF2                ----------->GT1             <---------At4g35610                           <-----------GT1                  --------------->AtSPL8    <---------MYB52(1) ---ID1              --------->ANAC55(2)                  <-----------GT1            <-----------HVH21 >ANAC58            <---------TOE2(3)                 <------------CBF----------->RAV1(2)--------->At4g35610 >ANAC58           <-----------GT1        <------ZmHOX2a(1) --------------->AtSPL3   <-----------TGA1   aagtttctcggttttgggattttacgttttaactttacaaaacaggattaaaccgaaattgaaccgtacaaaacctgtgcttaataccgtcatctcaaat  9468100                           <---------AHL20(2)                  ----------->RAV1(1)    --------->ZAT18          <---------AHL20(2) <------------CBF     --------->At5g28300  --------->AHL20(2)                                      --------->ZAT14    ----------->GT1------------>CBF      <---------ZAT18   <----------DOF2        <---------ZAT14    --------->TOE2(3)   --------->AHL20(2)         <------ZmHOX2a(1)        <<<<<<<<<<<<<<<<<LFY   attgaaccgtaataaatcgacaacaatataaaattgattttggttcactaagaggaccagacttttctctcggacttgagacactggagagactgaatac  9468200                                                                        <---------MYB52(1)                                                                 <-----------ARR10                                                                 --------->ARR11(3)                                                                 <---------ARR14(2)                                                                 <---------ARR11(3)                                                                <---------CCA1(2)                                                            --------->ANAC46                      <---------LBD16                       --------->ANAC58                        <                     <---------ANAC58                       --------->ANAC58                        -       ------>ZmHOX2a(1)                               --------->ARR14(2)                    ------>MYB46(1)     *TSS            <---------ANAC58                  <---------ARR14(2) <---------MYB46(3) ------>MYB83   gaccatgtcctcttcgctccattgctcgggtaaacttttaacaagggttcgaaatcgaatacacgaatatctcggtttgttcaattactgaaaccaatcg  9468300                                      --------->LBD16                                    <---------LBD16                                  --------->ARR14(2)                                  <---------ARR14(2)                                 --------->GLK1(1)                <---------At5g28300                                 <---------GLK1(1)                <---------DOF5.7(2)                            <-----------GT1                    <-------GAMYB                         <---------ZAT6                 <---------ATHB51    <---------AHL20(2)--------------->AGL15             <---------AHL20(2)                   -------- ---------AHL20(2)    <---------------AGL15         <---------AHL20(2)                      --------- -------->AHL20(2)   <-----------------AGL2         --------->AHL20(2)<---------MYB52(1)   ----------   aattttttaatctgtttcgattttctagttttagcatttccggtttagttcgatttaaattattcggttaccgtttttgtttagaatcacagaaaaaggt  9468400                                             <---------At4g35610                                             ------>NtERF2                                            --------->RAP2.6(2)                                            --------->DEAR3(1)                                            --------->RRTF1(3)                                          ------>NtERF2                                          --------->ABI4(1)                                         <---------ALFIN1                                         --------->DEAR3(1)                                         --------->AtMYB61                                         --------->DREB2C(2)                   ----------->TGA1      ------->GAMYB                 --------->YAB1          --------->ANAC46                 <---------ICU4         --------->DEAR3(2)                                      <----    <---------TOE2(3)    ------->TEIL   --------->MYB46(3)                --------->LBD16<---------MYB52(1) ->DAG2  <------ZmHOX2a(1)    --------->ANAC46            -------->P      ------>NtERF2 <-----------TGA1 >DAG2 --------->ALFIN1  --------->ARR14(2) --------->RAP2.3(2)          <---------LBD16<-----------HVH21 >DOF2<------ZmHOX2a(1)  <---------ARR14(2)--------->RAP2.3(1)          <---------LBD16 --------->TOE2(3)   gagattaaggaggagcgaaacatgacgaatccacttaattccaccgccgctaatcgctctaaccaggtatgttttccggcgataactcatcgtcagtttt  9468500                                                                                             <-------                                                        <---------YAB1     <---------WRKY38(1)                                                      <---------At4g35610  <---------WRKY12  <-------                                                  <---------RAP2.6(3)    <-----------HVH21   --------                                  <-----------GT1--------->DEAR3(1)      --------->At5g28300 --------                          <---------MYB52(1)     --------->RAP2.6(2)    ----------->GT1   <------ZmHOX2a(1)                        <---------ANAC58       --------->At4g35610  ----------->HVH21   <---------TOE2(3)       <---------ETT(1) <---------ANAC58       <---------At4g35610  --------->DEAR3(1) --------->YAB1 -----YAB1  ---------->DOF2  <---------YAB1    --------->ZAT2      --------->At4g35610<---------ATHB12   gattatgttccgacaaaagtgtgattccgttctgattatccattttctcagccgtcttctgatggaatcagcgacggtcaaatcaccaatgaggaagctg  9468600                                                        <-----------------AGL1                                                       <-----------GT1                    <---------bZIP60(1)              --------->GLK1(1)                    --------->bZIP60(1)             <---------ARR14(2)                 --------->ICU4                     --------->ARR14(2)            --------->ANAC58                     <---------HSFB2a(2)            --------->ANAC55(2)                  --------->HSFB2a(2)            <---------ANAC58            --------->ANAC58                    <---------LBD16                 <---------ANAC58 --At4g35610--------->ANAC46                 <---------ANAC58                   <---------ANAC46    < --ZAT2     <---------ANAC55(2)         --------->HSFB2a(1)--------->ATHB12<-----------RAV1(1) <----- ->ZAT2 <-----------GT1    <----------DOF2   <---------ANAC58         --------->ANAC58         <----- ->At4g35610--------->ANAC55(1)   --------->AtLEC2--------->LBD16     --------->ANAC58         <-----   aatcactaattaacaagtaatgacttcatctttttcatgcgaatgtttcttccggatttactaattgggaagaagcaatgttgcttaaactaaatttgca  9468700  Previous    Next  AGI:  At2g22250.1    Description:  AAT/ATAAT/MEE17 (maternal effect embryo arrest 17); aspartate transaminase. similar to aminotransferase class I and II family protein [Arabidopsis thaliana] (TAIR:AT1G77670.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO71816.1); contains InterPro domain Aminotransferases, class-I, pyridoxal-phosphate-binding site; (InterPro:IPR004838); contains InterPro domain Aminotransferase, class I and II; (InterPro:IPR004839); contains InterPro domain Pyridoxal phosphate-dependent transferase, major region (InterPro:IPR015424); contains InterPro domain Pyridoxal phosphate-dependent transferase, major region, subdomain 1; (InterPro:IPR015 Range:  from: 9464890    to: 9467988    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At2g22260.1    Description:  oxidoreductase, 2OG-Fe(II) oxygenase family protein. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G22270.1); similar to 2OG-Fe(II) oxygenase [Medicago truncatula] (GB:ABD28589.1); contains InterPro domain 2OG-Fe(II) oxygenase (InterPro:IPR005123) Range:  from: 9468205    to: 9470272    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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