Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                             --------->AHL20(2)                                                           <---------AHL20(2)                                                        <---------ICU4                                                        <---------AHL20(1)                                                        <--------ATHB1                            --------->HSFB2a(2)         --------->YAB1   ----------->GT1                    --------->KAN4(2)                   --------->AHL20(2)                       ----                  ------->TEIL                          <---------AHL20(2)                       ----             --------->At4g35610     ----------->GT1   --------->ICU4 ---------->DOF2          <-----       ---------->DOF2      <---------HSFB2a(2)      --------->YAB1  --------->AHL20(2) --------->MYB52(1)   gaacatgttcaaagcagatggatgttccttctgcaaaatttgtaattctctcgtttaataattttttgaaataaaagattaaaacaaacaaaacagagga  9443200                                                                                                    =                                                                                                    -                                                                                                   <-                                                                                                 ====                                                                                      ------>ZmHOX2a(2)                                                                                      ===============      <---------ARR11(3)              <------ZmHOX2a(1)      --------->ANAC58         =============== ----->ANAC58           <---------ARR14(2)                   --------->ANAC58       --------->ARR11(3) ----->ANAC58           --------->ARR14(2)            <------ZmHOX2a(1)      -------->P          ---- -ZmHOX2a(1)           --------->ATHB12        <---------ANAC46<---------ARR11(3)   <---------ARR11(3)   agcaagaagacattacaatccaacaagattggctattgaaggatttagggcgagtaggagaacaagctctcatagaatcaacccatgatcttatcagtcc  9443300                                             <---------bZIP60(2)                                             --------->bZIP60(1)                                             <---------TGA1a                                             <---------ANAC58                                             --------->O2                                             --------->TGA1a                                             <---------O2                                             <---------bZIP60(1)                                             <---------ANAC55(2)                                             <---------ANAC46                                            ----------->STF1                                            <-----------------------TaNAC69(2)                                           <---------TGA2(2)                                          ----------->HVH21                                          ----------->TGA1                                        <---------MYB46(3)            ------>ZmHOX2a(2)           <------MYB83           <---------At4g35610          <------MYB46(1)           --------->At4g35610          --------->MYB52(2)          <---------AGP1               <---------DEAR3(1)      =================================================MYC_MYB      <-------GAMYB                   <---------MYB52(1)     <---------MYB46(3)      <---------HSFC1(2)   --------->LBD16           <---------HSFB2a(1)   <---------At4g35610       --------->HSFB2a(1)         <---------ATERF1(1)   --------->At4g35610       --------->HSFC1(2)--------->ALFIN1   ------>NtERF2 ==================HOX2a_HOX2a=========================bZIP_DOF   ----------->RAV1(1) ----->ZmHOX2a(1)          --------->ARR11(3)<---------ANAC58    <---------ETT(1) --------ALFIN1            <---------ARR11(3)--------->ANAC55(2) --------->ANAC46 ==================HOX2a_HOX2a<----------DOF2<---------ANAC55(1) ----------->HVH21        <---------At4g35610 ===HOX2a_HOX2a     <---------ICU4   ==================MYC_MYB ------>ZmHOX2a(1)  --------->LBD16 ======HOX2a_HOX2a  --------->YAB1   <-------GAMYB     <---------MYB52(1)     --------->TOE1(2) -->ZmHOX2a(1)    --------->ARR11(3)<---------MYB46(3)<-----------HVH21       --------->TOE2(2)  <---   tcctccgctgttgatctgaaaatcatgaagaactttcgtcgttggtgacgtgtctccgtcgtctcctccgacatataaaacctccgagtttgagatggcc  9443400                                                                                                   <-                                                                                                   <-                                                                                           --------->AHL20(2)                                                                                           <---------AHL20(2)                                                                                        ------->TEIL                                                                                     --------->ANAC55(1)                    <---------ARR11(3)                                               --------->ANAC55(2)                    --------->ARR11(3)                                               <---------ANAC55(2)                    --------->AHL20(1)              ----------->GT1                  --------->ANAC58                    <---------ICU4                 <---------TOE2(3)          ----------->GT1      <-      ----------->RAV1(1)                      --------->YAB1               <------ZmHOX2a(2)    <--- ---------->ID1     <---------AHL20(1)--------->MYB52(1)           --------->YAB1    --------->ANAC58 -------DOF2       --------->ICU4 ------->TEIL--------->ICU4      <---------YAB1     ----------->GT1   tttgtctccaacattttagtaatattttcttcgatgaatctaactgaaattataagattaaaacagagatgataacagatcagtaacacgtatataattt  9443500                                                                 <---------ARR11(3)                                                                 --------->ARR11(3)                                                        --------------->AGL15                                                        <---------------AGL15                                                       <---------------AGL15                                                       <-----------------AGL3                                                       ----------------->AGL2                                                       <-----------------AG                                                     <-----------GT1                                                    <-----------GT1                                                <---------ARR11(3)       --------->YAB1          <---------TOE2(3)                     --------->AHL20(2)    --------->WOX13(1)         ---------->DOF2               --------->ANAC58----------------->AG --------ANAC58                        --------->ANAC58----------------->AGL3                      <- --------ANAC46                        --------->ANAC46--------------->AGL15  ----------->GT1   ----- --------ANAC58             ----------->HVH21 --------->ANAC58  <------ZmHOX2a(1)            <------- ------ANAC46 --------->CCA1(2)<---------YAB1 --------->ANAC58<---------TOE2(3)         ----------->GT1   tgtgtgtgttttaaagatagacatatgtaagtgaccattgcaagaaacaagaaattacccattttaggatattaatcaaaatgtaaaatgaagttataat  9443600                          <-------GAMYB                         <---------MYB46(3)                        <--------P<---------TOE2(3)                                              ----                        *TSS     --------->MYB52(1)                                              <---                       <---------ANAC46                                               ----------->GT1                       <---------ANAC58                                        ---------->DOF2   ---- --------YAB1          <-------GAMYB              <---------AHL20(2)   --------->AHL20(2)        <--- ---->ICU4             <---------ANAC58          <-----------TBP  ------------>CBF  ---------->DOF2 --YAB1           <-----------RAV1(1)            --------->AHL20(2)    --------->YAB1--------->DAG2<-   tttgatggaaatgagagtgaatgtgggttgttaactaagggtatggactgattttatagtggcaaacttgcaattaaaaaaaaaagaaaagtaaaatcag  9443700                                                                                              <------                                                                                              <------                                                                        =============================                                                                        <----------DOF2       -------   <---------ANAC58                       --------->ZAT14            --------->ARR11(3)       <------   <---------ANAC58               --------->GLK1(1)                  <---------ARR11(3)  --------->ALFIN1   <---------ANAC46            <---------ANAC58               <----------DOF2          <-------GAMYB ----->ARR11(3)                <---------ANAC58          <---------ANAC58              ============== ------ARR11(3)            <---------ANAC58      <---------ANAC46   <---------GLK1(1) <---------ANAC58 ----->ARR14(2)            <---------ANAC46      <---------ANAC58   <---------CCA1(2) <---------ANAC46 ------ARR14(2)            <---------ANAC58      <---------ANAC58   --------->GLK1(1) <---------ANAC58 -----------CBF        <------------CBF   <---------ZAT14<---------ANAC58       --------->MYB52(2)   atattgtgtgtgtccgagtcgaaaccattgagtgcgagttccactatacttccttgttggcttcctttggatatcttttggttatttggcgttggagcgt  9443800                 --------->PCF5              --------->ALFIN1             <-------MYC2             <-------PIF5             ------->PIF5             ------->MYC4             ------->MYC2             <-------MYC4            --------->bZIP60(2)            ==========================================bZIP_DOF            --------->O2            <---------TGA1a            --------->PIF3(3)            <---------PIF3(3)            <---------O2            <---------ANAC46            --------->TGA1a           ------>NtERF2         ---------------->PIF3(2)       --------->ANAC58       ------->GAMYB       --------->ANAC58       ===============MYC_MYB                                                                       <       --------->ANAC46                                                                            --   ---------->DOF2                                                                                 <-   ===================bZIP_DOF                                                                     <-  <---------ATHB12                                                                                 <- ---ANAC58<-----------RAV1(2)                            <---------CCA1(1)                         -- ---HSFB2a(1)<-------MYC3                                <---------RVE1(1) --------->WOX13(1)     >>> =====================bZIP_DOF                          <---------ARR11(3)--------->AHL20(2)    <---- -->HSFB2a(1)------->MYC3                             <---------TOE2(3)  --------->ICU4         <---- ---ANAC58<---------ALFIN1                 ---------->DOF2          ----------->GT1      <----------DOF2 =====================MYC_MYB       <---------At4g35610 --------->ARR11(3)<---------AHL20(2)   ------   tcccatcaagcgccacgtggtcccttccaatttgatcatgctgacaaaagaatattgagatatttgtttttggtaattaatcaaatgttttctttgtttg  9443900 ---------ALFIN1 ------->ZAT18                                                                      --------->ATHB51 --------ZAT14                                                                      --------->YAB1 --------WRKY38(1)                                                                  -------->ATHB1 --------WRKY12                                                               <---------ARR11(3) ------->ZAT14   -------->P                                                   --------->ARR11(3) >>>>>>>>>>>>>>LFY                                --------->At4g35610        --------->YAB1     <---- --MYB46(1)     <-----------GT1              <---------ZAT14  <---------ARR11(3)   <---------YAB1 --MYB83   --------->ARR14(2)     --------->ZAT14 <---------At4g35610       <---------ATHB12 -------- --->MYB59 <---------ARR14(2)---------->DOF2<----------DOF2   --------->ARR11(3)------>ZmHOX2a(2)   -   gtccactggtccatatactaacctcttgtaagaaagtgaagtcgaactttactgctgaagagaagaacttgagggccaatgatctattattgtctatgac  9444000                                                                                                    -                                                                                              ------>ZmHOX2a(2)                                       <---------ALFIN1                                       =======                                     ----------->RAV1(1)                                     ========                                  --------->AtLEC2                                           <------ZmHOX2a(2)                                  --------->ANAC46                                          <--------                                  --------->ANAC58                                          --------- -----ANAC46                      --------->ANAC58                                          --------- --->HVH21 <-----------GT1    <---------YAB1                                                <-------- -------->DOF5.7(2)           --------->AtLEC2   ----------->GT1        <----------DOF2<----------DOF2   gcgttaatggatttaactatatgcaatgcatcatgcatgcaacacataagatggtgaattctaaaatagagaaactttacttatagcatctttagatcta  9444100  Previous    Next  AGI:  At2g22190.1    Description:  trehalose-phosphatase. similar to trehalose-6-phosphate phosphatase, putative [Arabidopsis thaliana] (TAIR:AT4G39770.1); similar to unknown [Populus trichocarpa] (GB:ABK94249.1); contains InterPro domain HAD-superfamily hydrolase, subfamily IIB; (InterPro:IPR006379); contains InterPro domain Trehalose-phosphatase; (InterPro:IPR003337) Range:  from: 9440845    to: 9443624    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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