Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                         --------->ANAC58                       ------>MYB46(1)                       --------->ANAC46                       ------>MYB83                       --------->ANAC58                     --------->AtMYB61                                                              -                     <---------ALFIN1                                                         -------                    --------->MYB46(3)          --------->LBD16                               <------          --------->PCF5                      ------>ZmHOX2a(2)                               <------          <---------TCP20                    <------ZmHOX2a(2)                                -------          --------->PCF2                    --------->ARR14(2)       <---------ANAC46         -------     ----------->RAV1(2)                    <---------ARR14(2) <---------ARR14(2)            <-------   <-----------GT1<-----------GT1        <---------ANAC46      --------->ARR14(2)          ------>ZmHOX2a(2) ---------REM1(1)---------->DOF2   <---------TOE1(2)         --------->LBD16           <---------YAB1   agttgtaacctggtcccattaaaccaccccatgcttctaggtttcggatcccgatgtagtctccgtatttgtcgtagactctagcgcttatgatcgaatc  9434500                   ==================HOX2a_HOX2a                   <---------LBD16                 <---------ARR14(2) --------->DEAR3(2)------>ZmHOX2a(2) ------>TEIL     --------->ARR14(2)             --------->ARR14(2)                       <---------AHL20(2) -->GLK1(2)<---------TOE1(3)                --------->ANAC46    ------>ZmHOX2a(1)    <---------AHL20(2) ---ARR11(1)   <-------TEIL            --------->REM1(2)        ----------->GT1      --------->AHL20(2) ---ARR14(2)   ----------->ARR10   --------->GLK1(2)--------->At4g35610     ---------->DOF2 -->ARR14(2)  <--------P      <------ZmHOX2a(1) --------->GLK1(2)         --------->ANAC58        --- >TEIL<----------DOF2--------->LBD16  --------->ALFIN1<----------DOF2     --------->ANAC58        --- --ARR14(1)<---------TOE2(3)<---------TOE2(3)   <---------ARR14(2)     <---------ATHB12  --------->AHL20(2)   tgtaccggctttgaaggttgatccggttctaaggaagaatgtgtagacacaatctgcttcatcgtcctgtgaaatcaagaaagtcatttttttaaatggg  9434600                                                                                               <-----                                                                     --------->ARR14(2)        >>>>>>                                                                     <---------ARR14(2)        ------                                                      --------->AHL20(2)         --------->ALFIN1 ------>ANAC58                            <---------TOE2(3)<-------TEIL  ----------->GT1       <----- ------>ANAC58                      <---------YAB1   <---------YAB1  --------->GLK1(2)         ------   aagaaacagaagtttgtagtctaatagtttaaactaatgtcattgatgttgtgtcattatatacatattcaaatctggttaatgtgtgtgtctagttcta  9434700                                                                      <---------ANAC46              -                                                                    ------>NtERF2                   -                                                                   --------->ALFIN1                 <                             <---------ARR14(2)                    <---------DEAR3(1)               -                             <---------GLK1(2)           <---------At4g35610<---------ANAC46        <                             --------->ARR14(2)          --------->At4g35610<---------bZIP60(2)     -     --------->YAB1        ----------->ARR10             <---------LBD16 ----------->HVH21          -   <---------ARR11(3)    <-----------------AG        ----------->RAV1(1) ----------->TGA1           - ----HSFB2a(2)         --------->ANAC58             ----------->HVH21<------NtERF2                  < >ZML2                 --------->ANAC58   --------->RAP2.6(3)   <---------DEAR3(1)          <------ZmHOX2a(1) --->HSFB2a(2)     --------->ANAC58       <---------At5g28300--------->ARR14(2)    <------ZmHOX2a(1)= ----HSFC1(1)      --------->ANAC58      --------->MYB52(1)  <---------ARR14(2) <------ZmHOX2a(1)   - --->HSFC1(1)    <------ZmHOX2a(1)    <---------------AtSPL3 ----------->HVH21--------->ALFIN1    <--   gacaaaatcatatatgagaggaagcaagtcagatttggaaaacttacggctaatgcgacagcggagacggtggcgatgacgaggaggagtgagaggaaga  9434800   --------->MYB52(1)  ----------->HVH21  --------->TGA2(2) <-----------HVH21                               ------>ZmHOX2a(2) -------->ANAC58                                --------->CCA1(2) -------->ANAC58                                <------ZmHOX2a(2) ---------bZIP60(1)                            >>>>>>>>>GATA-3 -------->bZIP60(2)                            >>>>>>>>>GATA-2 ---------TGA1a                                --------->ARR11(3) -------->TGA1a                                --------->AGP1 -------->TGA2(1)                              <---------ARR11(3)          --------->ICU4 -------->ANAC46                               >>>>>>>>>GATA-4   --------->AHL20(2) ---------TGA2(1)             ------->TEIL     >>>>>>>>>GATA-1   <---------AHL20(2) =================================================bZIP_DOF       <---------YAB1 -------->bZIP60(1)      --------->CCA1(2)    --------->GLK1(1) --------->TOE2(3)                *TSS ----ZmHOX2a(1) --------->ATHB12       ---------->DOF2        --------->ICU4            ---------->DOF2   ggacgtcacggcgaggcatcatcggtgatatggatgtataagaaagagagatctagtctatggaaatattaatagaaatgttgaaaatgctaaagtatat  9434900                                                         --------->O2                                                         --------->ANAC55(2)                                                         <---------TGA1a                                                         --------->bZIP60(1)                                                         <---------ANAC55(1)                                                         <---------ANAC55(2)                                                         <---------ANAC46                                                         <---------ANAC58                                                         <---------bZIP60(1)                                                         <---------bZIP60(2)                                                         <---------O2                                                         ==========================MYC_MYB                                                        ----------->STF1                                                       <---------TGA2(2)                                                      ----------->TGA1                       --------->YAB1               <---------At4g35610                       -------->HAHB4       --------->ANAC55(2)                       <---------ICU4       <---------ANAC55(2)                      --------->ICU4        <---------ANAC55(1)                   --------->AHL20(2)       <---------ANAC46                   <---------AHL20(2)       <---------ANAC58                  --------->AHL20(2)        <---------ANAC58                            --------->ANAC58               --------->ATHB12         --------->At4g35610                       --------->ICU4               <--------ATHB1           ===========================MYC_MYB  <---------MYB52(1)      -              <---------ATHB12          <-------GAMYB ----------->HVH21   --------->MYB52(2)     ----              --------->ICU4            <---------At4g35610--------->ALFIN1<-------GAMYB--------->ANAC58          ------------>CBF              <---------GLK1(1)<---------ANAC58 <---------MYB46(3)  -------   gagagtttagatttcaatgatttaattatcgtctgttttgggagttgcgtatgaagatgacgtggtcgtttttggtccgttggaatgagtaagaaataag  9435000                           ------->PIF5                           <-------PIF5                          --------->bZIP60(2)                          --------->ANAC46                          --------->ANAC58                     --------->YAB1                  ------>ZmHOX2a(1)                <------NtERF2                ------>ZmHOX2a(2)               --------->RAP2.6(3)               <------ZmHOX2a(2)          <------NtERF2              <---------ARR14(2)         <---------SPL7              --------->ARR14(2)         ----------->HVH21              <---------ARR11(3)       --------->At4g35610                 --------->AHL20(2)             <------ZmHOX2a(1)         <------NtERF2              --------->GLK1(1)       <---------ANAC55(2)--------->ANAC58------>NtERF2  <---------ANAC58  <---------AHL20(2) --------->AHL20(2) ---------->DOF2    <---------At4g35610 <---------MYB46(3) -------->YAB1--------->ARR11(3)     <---------DEAR3(1)  <---------ANAC58  --------->AHL20(1) ----->YAB1<---------TOE2(3)   --------->DOF5.7(2)<---------DEAR3(2)      --------->AHL20(2)      <-- -->YAB1   <---------TOE1(3)   <---------MYB52(1)<---------DEAR3(1)  ----------->GT1   <---------AHL20(2)   aataaaaatacttaaggatcctataagcacgtcgttaactcggcggacaggtcggcatgggttgtcagatttcgaaaaaaattgcatatttttttttgtc  9435100       <---------ARR11(1)       --------->ARR11(3)       <-----------ARR10       <---------ARR11(3)       <---------ARR14(2)                                                               ----------->RAV1(1)       --------->ARR14(2)                                                            --------->ANAC58      <---------CCA1(2)                                                              --------->ANAC46      --------->GLK1(1)                                                      <---------ZAT14  --------->ANAC58             --------->ZAT18                               --------->ZAT14  --------->ANAC46             <---------ZAT18                  <-----------GT1      --------->ANAC58  --------->ANAC58  <-------TEIL ------->TEIL      --------->YAB1 =================================== -------MYB52(2)   --------->CCA1(2)            --------->WOX13(1)<------------MYB.PH3(1)           <   acaaacgcaaatcttcgtgagatacaatacaaatgcacttcatttttcgccaattagaatgtaatgtaacagtttccagtgtaatgctcgcaacataaca  9435200                <------NtERF2               ------>NtERF2              --------->TCP20              <---------PCF2           --------->ALFIN1         --------->ARR14(2)         <---------ARR14(2)     <-------MYC3     ------->PIF5 <------NtERF2     ------->MYC2 --------->LBD16                                                                  --     ------->MYC3 <---------LBD16                                                                  <-     <-------MYC2<---------DEAR3(1)                                                              <---     <-------PIF5<---------LBD16                                                                -----    --------->O2--------->ATERF1(1)                    <---------DAG2                       ---------    --------->TGA1a                                    <----------DOF2                      <--------    <---------ANAC46                                  <---------ANAC58                     --------->ARR11(3)    <---------TGA1a<------NtERF2                    <-----------GT1                        <---------ARR11(3)    <---------O2<---------LBD16         <---------AHL20(2)                          <---------TOE1(3) =============MYC_MYB                  --------->AHL20(2)    ---------->DOF2        <---------TOE2(3) -----------HVH21<---------ANAC46    --------->TOE2(3)<---------ANAC58   <---------ETT(2)----------->ARR10   tgtttcacgtggattggggccggggaagaattagagaaacattaatttttgtttttgctttttgaaagaaaactttcgaccatatgaaggtaagatttcc  9435300      --------->TOE2(3)      <---------ANAC58      <---------ANAC58                                               ---------->DOF2    <---------AHL20(1) ------->AHL20(2)                                          <---------ANAC58             <---------AHL20(2) --------AHL20(2)                                  <---------ANAC55(2)                  --------->AHL20(2) -------DOF2               <---------YAB1          --------->ANAC55(2)                 --------->AHL20(2) ---->TOE2(3)         ------->TEIL         --------->YAB1  <---------ANAC46        --------->AHL20(2) >GLK1(1)             <-------TEIL    <---------YAB1       <---------ANAC58----------->GT1 -GLK1(1) <---------ARR11(3)      <---------WOX13(1)  --------->ATHB12   ---------->DOF2--------->AHL20(1)   tttaatttccttgatattttcatgtacatatgtttgatttataaatgaaaattaagtgattgtgtgtttttcaaagaaagaaaaatgaaataaattttgg  9435400  Previous    Next  AGI:  At2g22170.1    Description:  lipid-associated family protein. similar to lipid-associated family protein [Arabidopsis thaliana] (TAIR:AT4G39730.1); similar to dehydration stress-induced protein [Brassica napus] (GB:AAK01359.1); contains InterPro domain Lipase/lipooxygenase, PLAT/LH2 (InterPro:IPR008976); contains InterPro domain Lipoxygenase, LH2 (InterPro:IPR001024) Range:  from: 9433929    to: 9434897    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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