Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                    <---------YAB1                                 <---------AHL20(2)                              <---------ARR11(3)                              --------->AHL20(1)                    <---------AHL20(2)                  <---------AHL20(1)                             --------->AHL20(1)     <---------YAB1           <---------AHL20(1)               <---------AHL20(1) ---------->GT1   --------->AHL20(1)              --------->ICU4 <---------AHL20(1) ---------TOE2(3) --------->AHL20(2)       <---------ANAC46    <---------AHL20(2) -------AHL20(2)  <---------AHL20(2)   <---------ANAC58       --------->YAB1               <---------LBD16 --GT1           --------->AHL20(2)    <---------ANAC58  ----------->GT1          <-----------GT1   ttaagttattatctgagaaataaattagacaatatttttattcgtgtgtgtaatttttgtggtataatattttttcttatattgtttcaattctacggat  9412900                                                                                      ----------->GT1                       --------->AHL20(2)                                            --------->HSFB2a(2)                      --------->AHL20(2)   <---------AtLEC2                          <---------HSFB2a(2)                  --------->YAB1           <---------ANAC46                         <---------ANAC58               --------->WOX13(1)          <---------ANAC58                         <---------ANAC58           ----------->GT1                 <---------ANAC58                         <---------ANAC46          --------->DAG2       ----------->GT1                                   <---------WOX13(1)          <---------TOE2(3)--------->AHL20(2)                            <---------WOX13(1)     -----        ---------->DOF2<---------AHL20(2)<---------YAB1 ------->TEIL   --------->ATHB12      --------   gttttggataaaaaggttaatcaaatttataaaatgtaaaattttgcttgaacaaatgaaccaaaatgtttactaattggctaattgctggaaaaaaaca  9413000                                                   <---------At4g35610                                          <---------AHL20(1)                                          --------->AHL20(2)                                          <---------AHL20(2)                            ---------->DOF2                                      --------->ICU4                           <---------YAB1                                      <---------ATHB51                     <---------YAB1      <---------YAB1                  --------->AHL20(2)                 --------->AHL20(2)     -----   --------->AHL20(2)                 <---------AHL20(2)            ------>ZmHOX2a(1)<---------TOE2(3)   <---------AHL20(2)           ----------->GT1    --------->At4g35610   <---------AHL20(2)     ----- ------>GT1                    <---------TOE2(3)<---------At5g28300--------->TOE2(3)---------->DOF2 ---->MYB.PH3(1)     --------->AHL20(2)<---------ICU4  ---------->DOF2  --------->AHL20(2)-----------   gttatataatttttgttaacaaaaaaaatgtttgatgtaaataattaattcacagctaaaagtcaatttcctcatttatttttgattaaagaaagtaata  9413100                                                                      <------NtERF2                                                                      <---------ZAT2                                                                     <---------DEAR3(2)                                                            ------>MYB83                                                            ------>MYB46(1)                                                          ------->GAMYB                                                          --------->DEAR3(1)                                                         --------->MYB46(3)                                                         --------->DEAR3(2)                                                      --------->MYB46(3)                                                <------NtERF2        ------>NtERF2                                                --------->At4g35610  <---------RAP2.6(3)                                               <---------DEAR3(2)    <---------ATERF1(1)                                               <---------RAP2.3(1)  <---------RAP2.6(2)                                              <---------RAP2.3(3)   --------->ATERF1(2)                                              <---------DREB2C(2)   --------->RAP2.6(2)  <<<<<<<<<GATA-2        <---------TOE2(3)                     --------->ETT(1)      <---------DEAR3(1)   <<<<<<<<<GATA-4        <---------ANAC55(2)                   <---------DEAR3(1)    <---------ATERF1(2)  <<<<<<<<<GATA-3 ---->AHL20(2)                               --------->RAP2.6(3)   --------->RAP2.6(3)   <<<<<<<<<GATA-1 ---->YAB1             --------->ZAT14      <-----------HVH21    --------->ANAC58       --------->ARR14(2) >GT1 --------->AHL20(2)                   <-----------RAV1(1)   --------->ANAC58       <---------ARR14(2)   aaaaacaattaagtataccattcgctgtacaagagtcgtttagttctgtcggctcgacaaccgactcaagccggctcgagtcgctaagtgaatccactcg  9413200                   ------>NtERF2                   <---------DEAR3(2)                   <---------RAP2.3(1)                   <---------ATERF1(1)                  <---------ATERF1(2)                  --------->RAP2.6(2)                  <---------RAP2.6(2)                  <---------DEAR3(1)                  --------->ATERF1(2)                 <---------LBD16                 --------->RAP2.6(3)             ---------->DOF2         <---------ZAT18         <---------ETT(2)                                  --------->At4g35610       <-------GAMYB<------NtERF2                          <---------At4g35610      <---------DEAR3(2)                                   <---------ZAT2      <---------MYB46(3)                                   --------->ZAT2     <---------At1g77200                               <---------ALFIN1     <---------DEAR3(1)                                --------->ANAC46     <---------MYB46(3)                           <---------ZAT18                                <---     <---------DEAR4(1)                           --------->ZAT14                             <------     <---------DREB2C(2)                         <---------ALFIN1                         <---------DAG2   <-----------HVH21--------->ATERF1(1)         --------->At4g35610                       <----------DOF2  <-----------RAV1(1) ------>NtERF2             --------->ZAT2                         <---------ALFIN1   ctgtctgtcggtggacaaagccggctccaatctgatcactctctctcaccagcacacacacagctctctctcttccctctctctctcccccgctttatac  9413300                                                                                               <-----                                                                                          --------->MYB52(1)                                                                                         ----------->HVH21                                                                                       <---------ANAC55(2)                                                                                       --------->ANAC58                                                                                       --------->ANAC58                              >>>>>>>>>TBF1                                            --------->ANAC46 -------DOF2               >>>>>>>>>TBF1                  <----------DOF2              --------->ANAC55(2) -----GT1               >>>>>>>>>TBF1      *TSS    ------>ZmHOX2a(1)                   --------->ANAC55(1)   tttgttgagtcaaaatcacagacgaagaagaagaagaaacctctctctcactcctctctcctttctctcgtcttattcgcttctcttctacgtaacagat  9413400                                                                                  ------>ZmHOX2a(2)                                                                                 --------->GLK1(1)                                                                                 <------ZmHOX2a(2)                                                                                 <---------GLK1(1)                                                                                --------->ARR11(3)                                                                                <---------AGP1                                                                                <---------ARR14(2)                                                                                --------->ARR14(2)                          <---------At4g35610                                  <---------ARR14(1)                         <---------TOE2(3)                                 --------->MYB52(1)                    <---------AtLEC2                       <-------TEIL   --------->ATHB51                 ---------->ID1             --------->WOX13(1)   <----------DOF2<---------ARR11(3)  < ----GLK1(2)   <-----------RAV1(1)         ------>ZmHOX2a(2)     <---------DAG2<---------CCA1(2)  ---   tgttcatcttcttctccttgttgcattgaggtgagttcaatttgatctatcaatgtctaaatgcatgctttttgaattatcggatctcttgtgtttgatt  9413500                            =================================HOX2a_HOX2a                            ==================HOX2a_HOX2a                            ------>ZmHOX2a(2)                          --------->ARR14(2)                          --------->AGP1                          <---------AGP1                      ========================HOX2a_HOX2a                      ------>ZmHOX2a(2)                    <---------ARR11(3)                    --------->ARR11(3)                <---------ICU4                --------->YAB1               <---------ATHB12        ------>ZmHOX2a(1)               <---------ATHB51    --------->GLK1(2)          ====================================HOX2a_HOX2a          <------ZmHOX2a(2)==================================HOX2a_HOX2a          --------->CCA1(2)<------ZmHOX2a(2)         --------->AGP1   --------->ARR11(3)         <---------ARR11(3)--------->CCA1(2)                                                ---------         --------->ARR11(3)===================HOX2a_HOX2a ----------->GT1                   ------->TEIL        <---------GLK1(1) <---------ARR14(2)              <---------MYB46(3)      <----------DOF2        --------->GLK1(1) <---------ARR11(3)     <---------GLK1(1)       ------>ZmHOX2a(1)  --------- ---------WOX13(1)<---------YAB1   --------->ARR14(2) ------>ZmHOX2a(1) --------------->AGL15       - ------>ATHB12 --------->ICU4      <---------ARR14(2)<---------YAB1     --------->TOE2(3)   <--------   tcattgatagagatccaattatgatctagatctgaagaatcctgttttttgagttcctattggttaaaaagtttcctcatttagctttagttcgaatctg  9413600                                                                                        <---------YAB1                                                   ----------->GT1                      <---------AHL20(2)                                              <---------ANAC46                         --------->AHL20(1)                                              <------MYB83                             <---------AHL20(2)                                              <------MYB46(1)                          <---------AHL20(1)                                             --------->MYB111(2)                       --------->AHL20(2)                                             --------->MYB111(1)                    --------->AHL20(2)                 ------>ZmHOX2a(2)           --------->MYB59                        --------->YAB1         --------->ARR11(1)                  --------->MYB46(2)                    <---------YAB1     <-----------GT1                        <---------MYB55(1)  <-----------GT1   --------->AHL20(2) >ARR14(2)      <------ZmHOX2a(2)          <<<<<<<<<MYB2    <---------AHL20(2)    --------->AHL20(1) >GLK1(2)<---------ARR14(2)--------->ZAT6  <<<<<<<<<MYB1    --------->AHL20(2)    <---------AHL20(2) ---------->GT1<---------ARR14(2)          <---------MYB52(1)<---------YAB1      --------->YAB1 -ARR14(2)     --------->ARR14(2)    <---------GLK1(1)  <---------RVE1(1)       <---------ATHB51   gaatgttaaacgattcggatcgagatttagcagtagtagaattcagttaggtagagtgatatttttatactattagtcttcaattataatataattgcat  9413700                                              <----------DOF2        <-------GAMYB      <------ZmHOX2a(2)                                            ------>ZmHOX2a(2)     <---------ANAC58     --------->ARR14(2)            --------->ZAT14            <---------WOX13(1)    <-----------RAV1(2)       <---------ARR14(2)            <---------ZAT14          --------->ATHB12<---------AHL20(1)                <---------ARR11(3)        ------>ZmHOX2a(1)           --------->ICU4   --------->AHL20(1)<---------MYB46(3)------>ZmHOX2a(2)  <----------DOF2                   <---------YAB1--------->AHL20(2)--------->ALFIN1   --------->ARR11(3)  <---------DAG2               --------->YAB1 ------>ZmHOX2a(1)   <---------ANAC58----------->HVH21 -   tgagcttttcctacttcactgtatcgttttctattgtaaagattgatcctttttatatattatgcagggggtgttgttgatgttctgacgatctgatttg  9413800  Previous    Next  AGI:  At2g22125.1    Description:  binding. similar to binding [Arabidopsis thaliana] (TAIR:AT1G77460.1); similar to C2 domain-containing protein / armadillo/beta-catenin repeat family protein [Arabidopsis thaliana] (TAIR:AT1G44120.1); similar to predicted protein [Physcomitrella patens subsp. patens] (GB:EDQ79151.1); similar to hypothetical protein OsJ_019806 [Oryza sativa (japonica cultivar-group)] (GB:EAZ36323.1); similar to hypothetical protein OsI_021438 [Oryza sativa (indica cultivar-group)] (GB:EAZ00206.1); contains InterPro domain Armadillo-type fold; (InterPro:IPR016024); contains InterPro domain HEAT (InterPro:IPR000357); contains InterPro domain Armadillo (InterPro: Range:  from: 9413343    to: 9421598    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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