Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                               <------MYB83                                                                                             <------MYB46(1)                                                                                            ---------                                                                                         --------->ARR14(2)                                                                                   <---------STY1(1)     --------->YAB1                               <-----------GT1                  --------->STY1(1)    <---------YAB1                       <---------DAG2    <---------AHL20(2)>>>>>>>ZML2 <---------ARR14(2) ----ARR11(3)                 --------->ICU4 <---------AHL20(2)              <---------HSFB2a(2) --->ARR11(3)    <-----------GT1         <----------DOF2   --------->AHL20(2)--------->HSFB2a(2)    <   cttgatatcatagttcaattttcgttttagtcaaaattgatgactttttatttttcattttttaaataactaataggttctaggcctaggggatttggta  9379200                                                                    <---------ARR14(2)                                                                    --------->ARR14(2)                                                       --------->YAB1                           -----                                                    =================================================                 ----------->GT1                    ------>ZmHOX2a(1)                        -------- >MYB59         <---------TOE2(3)           --------->CCA1(2)      <----------TaMYB80      <---------YAB1 -----------RAV1(1)                 <----------DOF2 <---------------AGL15               <---------YAB1   ttatgttgtgcttatatataggttaatttgtttatattcttttcagatataatcctattagaagatagcatattcgatataagtttgtttatgattctta  9379300                                         --------->ARR14(2)                                         <---------ARR14(2)                                         <---------ARR11(3)                                         --------->ARR11(1)                                         --------->ARR11(3)                                   <-----------GT1                                   --------->ZAT6                                <---------GLK1(1)                                                ----                               --------->ARR11(3)                                             -------                               <---------ARR11(3)                                       ------>ZmHOX2a(2)                             <---------TOE1(2)                                         --------->GLK1(1)       <---------YAB1        <---------TOE2(2)   --------->ARR14(2)                    <---------GLK1(1)   --------->KAN4(2)      ------>ZmHOX2a(2)      <---------ARR14(2)                   --------->ARR11(3)  <----------TaMYB80     <------ZmHOX2a(2)--------->CCA1(2)              ------------>CBF   ------>ZmHOX2a(1) ----->DOF2         =============HOX2a_HOX2a <---------LBD16             <---------ATHB12  --------->ANAC46 =====================================================MADS_MADS   <------------CBF    <---------ARR11(3) ->TOE2(3)          <------ZmHOX2a(1) --------------->AGL15  <----------DOF2       <---------KAN4(2)   aagtatattctccttgtatataggacgatcgtagatatcactagatatggggaactgtaatgcctttatattgaaatcaatagagaatgatctcctcaac  9379400                                                                               --------->ANAC58                                                                               --------->ANAC58                                                                              <---------TOE1(2)                                                                              <---------TOE2(2)     -                                                                            --------->TOE2(2)     ---                                                               <-----------GT1--------->SPL7      <--                                                           <----------DOF2  <---------SPL7     <-----   <----------DOF2                                   <----------DOF2        --------->TOE1(2)  ------ --->GAMYB             ----------->RAV1(1)       --------->REM1(1)    ------>ZmHOX2a(1)        <----- -->MYB52(1) <----------DOF2  --------->ICU4   ------>ZmHOX2a(1)   ------>ZmHOX2a(1)           ------   ggagactttcattagctttcaaatccaacatacttattaagtagggctccttcatctttttcttttctcctcctccatcgtacgatatgtcttctccagc  9379500                   --------->ANAC58                   --------->bZIP60(2)                   --------->ANAC58                   --------->TGA1a              --------->ANAC46             ================MYC_MYB             ------->GAMYB            --------->MYB46(3)           ------>MYB46(1)           ------>MYB83          --------->MYB52(1)        --------->MYB46(3)        <---------MYB52(2)      --------->AtMYB61      <---------KAN4(2)      <---------ALFIN1  --------->ANAC58     --------->MYB46(3) --------->ANAC58   --------->ANAC46--------->ANAC46         <---------ANAC46   <---------ALFIN1<---------O2             <---------ANAC58 -------->RAP2.6(2)--------->O2             <---------ANAC58 ------>At4g35610 <---------LBD16 --------->YAB1 -------ATERF1(1)<---------ALFIN1<-------TEIL ---------->ID1 ----At4g35610--------->ANAC58--------->KAN4(1)              <---------YAB1 --->ZAT2--------->AtMYB61   <---------ARR14(2)        <---------MYB52(1)     --------->YAB1        < ----ZAT2--------->DEAR3(1)  --------->ARR14(2)       --------->TOE2(3)   <------ZmHOX2a(1)         < --->At4g35610--------->ANAC58<---------KAN4(1) <-----------TGA1      ---------->DOF2          ------   agcctccaccaccaacgagccacggcacgagaatattcatagagtttcgtcgtcatcgttattctcattagtaaaaggactcataacaggtttactccaa  9379600                                                              --------->DEAR3(1)                                                              --------->WRKY38(1)                                                              --------->WRKY12                                                              --------->LBD16                                                             --------->ATERF1(1)                                                             <------NtERF2                                                            --------->At4g35610                                                            <---------LBD16                                                            <---------At4g35610                                                            ------>NtERF2                                                            --------->LBD16                       <--                                                           <---------ANAC46                   <------                                                          <---------RAP2.6(2)                 -------                                                          <---------LBD16 --------------------->WRI1                                                       <XXXXXXXXXXXXXXXXXXXXMIR171A           -------                                                    --------->ARR11(3)    <----------DOF2     <------  <---------At4g35610                             --------->ANAC46   <---------ATHB12      <--------- ---------WRKY12                 ------->GAMYB --------->TOE1(2)    ------>MYB83        <---------ICU4 ---------WRKY38(1)           --------->MYB52(1) --------->SPL7     ------>MYB46(1)   <-----------TGA1 ---->DOF2             --------->TOE2(3)      --------->AtMYB61------>NtERF2  ---------->ID1 --------   agtcaactcatgagacgagctataaacttaatcaaccgaaaccctagaccatacgatattgccgcggaccaatcttctttgttgttttcgtcattacctt  9379700                                                                                                  <--                                                                                                  <--                                                                                                 <---                                                                                                 <---                                                                                                 ----                                                                                                 ---- <---------REM1(1)                                                                            ------>ZmHOX2a(1) -------YAB1                                                                                  ------- ---------AGL15                                <---------ALFIN1                               ======= -->TOE2(3)                        --------->ANAC58                  <---------HSFC1(2)     --------- -------->AGL15                    --------->ANAC46                  --------->HSFC1(2)     <-------- ---DAG2                           --------->ANAC58               ---------->DOF2     <---------ANAC58 --GT1                         <---------HSFB2a(2)              --------->HSFB2a(2)   <---------ANAC58 --------->AG                  --------->HSFB2a(2)              <---------HSFB2a(2)  <---------ZAT18   atgatgtagttttgaactgcttagctcgtgtctccagacgctactacccaaacctctcttgtgtttccaaaagcttccaatcccttgtgcgttctcctga  9379800                            --------->YAB1                           --------->ICU4                         ---------->DOF2               --------->TOE1(3)               <---------------AGL15               --------------->AGL15               --------->TOE2(3)              =======================================================================MADS_MADS              <-----------------AGL3              <-----------------AG -------ANAC58----------------->AG -------ANAC58----------------->AGL1                                                        <------MYB46(1) ------At4g35610=========================HOX2a_HOX2a                             <------ZmHOX2a(1) ------ZAT2   <-----------------AGL1                                            --------->At4g35610 ----->At4g35610------>ZmHOX2a(1)                                               <---------At4g35610 ----->ZAT2   ----------------->AGL3                <---------DAG2            <-----------RAV1(2)  <- -->LBD16     ----------------->AGL2         <---------YAB1          <----------DOF2    --------->ATHB12 ===================HOX2a_HOX2a   ------>ZmHOX2a(2)<---------ANAC58================================== -->RAV1(2)  <------ZmHOX2a(2)  --------->ARR11(3) <---------ANAC58----------------->AGL1   <------MYB83 -LBD16  <---------------------WRI1  --------->LBD16<----------DOF2<-----------------AGL3 <---------WOX13(1)   gcttgcacatatgcgatccttaataggcaaagatgatcccgtcgtttatgtttgcttttccgatactaagccttttttgggcaggagacttgattggttt  9379900                                                                                                  ---                                                                                                  ===                                                                                                 <---                                                                                                 ====                                                                                                 ----                                                         --------------->AGL15                  -----                                                         <---------------AGL15                  <----                                                      <-----------GT1                           <----                                                  <-----------GT1                               -----                                           <---------TOE2(3)                                    <---- ---------DOF2                             <---------TOE1(3) <-----------RAV1(1)                ----- ========================================================================MADS_MADS        <-------TEIL   actttgaatccaaacgagaagaaaacaagtgttcttaactcatttcaggttttttcttactatatgttgtattgtccctccgtctccataggttcaaaga  9380000                                                             <---------DEAR3(1)      --------->YAB1 --->ZmHOX2a(2)                                             <---------LBD16       ------>ZmHOX2a(1) ==================HOX2a_HOX2a                =================HOX2a_HOX2a    --------->TCP15(1) ---ZmHOX2a(2)                                ------>ZmHOX2a(2)        <---------ANAC58 ==================HOX2a_HOX2a              <---------ARR11(3)         <---------ANAC58 ----->CCA1(2)                              --------->ARR11(3)         <---------ANAC46 ---->ARR14(2)                      ------>NtERF2           --------->SPL7  <---------MYB46(3) -----ARR14(2)                    ------>NtERF2           <-----------HVH21--------->ALFIN1 -----ARR11(3)   ------->TEIL     --------->LBD16       ------>ZmHOX2a(1)<-----------RAV1(1)      --- ---->AGP1  <------ZmHOX2a(1)    <---------ANAC58     ----------->RAV1(2)--------->ALFIN1         --- -------ARR10   <---------AtLEC2 <---------ANAC58     ===============================RAV       ------ ---->ARR11(3) <-------TEIL     <---------LBD16<----------DOF2--------->LBD16 <---------PCF2<------ZmHOX2a(1)   tctacttcgttggaggatgcatgtacaaatgtttgccgggcctattgatctttgattcctggtccggcgagttgtgtgtgggtcctagcatgaaggaggc  9380100  Previous    Next  AGI:  At2g22030.1    Description:  kelch repeat-containing F-box family protein. Identical to F-box/Kelch-repeat protein At2g22030 [Arabidopsis Thaliana] (GB:Q9SI02); similar to kelch repeat-containing F-box family protein [Arabidopsis thaliana] (TAIR:AT2G44630.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO71765.1); contains InterPro domain Kelch repeat type 1 (InterPro:IPR006652); contains InterPro domain Kelch-type beta propeller (InterPro:IPR015915); contains InterPro domain Kelch repeat type 2 (InterPro:IPR011498); contains InterPro domain Cyclin-like F-box (InterPro:IPR001810); contains InterPro domain Kelch related (InterPro:IPR013089); contains InterPro Range:  from: 9379610    to: 9380761    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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