Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                      <---------ICU4                               <---------ZAT6                                   <---------YAB1                               <---------TOE1(3)     <------ZmHOX2a(2)             --------->ICU4                   ------>ZmHOX2a(2)    <---------ARR11(3)           --------->YAB1                   --------->ARR14(2) ----------->ARR10    --------->ARR11(3)          <-------TEIL              <------ZmHOX2a(1)<---------ZAT6   <------ZmHOX2a(1)        <-------TEIL      --------->WOX13(1)  <---------ARR14(2) --------->MYB59 --GT1--------->YAB1 ----------->GT1--------->ATHB12      =================HOX2a_HOX2a   caataggatcataacccatatggtggtatatacattcatgattagcatcaatcttgggcaggataatggatcgtctagtgctagggttagatactattag  9355800                          <------ZmHOX2a(1)       --------->ZAT14                                   <                   <---------ZAT14                --------->REM1(2)       --------->At4g35610     ---                   --------->ZAT14       <---------ATHB12                 <---------At4g35610    ----                  <---------ZAT6        <-----------ARR10  <------ZmHOX2a(1)                     <---              <---------YAB1   <-------TEIL       <---------ZAT14<---------TOE2(3)           --------   tctagggctagacactattagtgtagaaggaggtccatggcaaatcaaaccgtgaacagaaggagcaaaggttttaagctgtagatgagggcaattcata  9355900                                                                     <------NtERF2                                                                     --------->ATERF1(1)                                                                     ----------->RAV1(2)                                                                    <---------ATERF1(1)                                                                   --------->RRTF1(2)                                                                   --------->RRTF1(3)                                                                   --------->RAP2.3(2)                                                                   --------->DREB2C(2)                                                                   <---------ALFIN1                                                                   <---------ATERF1(2)                                                                   --------->ATERF1(2)                                                                   --------->DEAR3(1)                                                                   --------->RAP2.3(3)                                                                  --------->ORA47(2)                                                                  --------->ERF1                                                                  --------->RAP2.3(1)                                                                  --------->DEAR4(2)                                                                  --------->RAP2.6(1)                                                                  --------->RRTF1(1)                                                                  --------->ATERF1(1)                                                                 <---------At4g35610      <------MYB46(1)                                            <---------RAP2.3(1)      <------MYB83                                               --------->LBD16  --------->MYB52(2)                                             ------>NtERF2 --------P                                                       <---------ATERF1(1)         <------- -------->GT1                                       --------->ANAC58--------->ABI4(1)      <--------- ----->DAG2                                         --------->ANAC58------>NtERF2 --------->ICU4   <- ------TOE2(3)                          <---------ATHB12         --------->At4g35610   xxxxxxxxxxxxxx ->YAB1                               --------->WOX13(1)        --------->ANAC46---------->DOF2    <-   aggtaagttggtttagaagacgaagttgattcaccttgatcaatcaaggagaagaagcaatggattccgccgcctgcgattgtaaagatgagactttgtg  9356000                                                                                      --------->STY1(2)                                                 --------->ATHB12                     <---------STY1(2)                                                <---------ATHB12                      <---------ZAT2             --------->WOX13(1)                 --------->ICU4                       ------>MYB46(1) ----RAV1(1)--------->AHL20(2)              <---------ANAC58                         ------>MYB83>>>> -DOF2      <---------AHL20(2)              <---------ANAC46                    <---------ARR14(2) --------ANAC58                             <---------ANAC58           <---------LBD16--------->ZAT2 xx>smallRNA(s)  <---------------AtSPL8 <-------GAMYB           <----------DOF2 --------->ARR14(2) --------ANAC58  <---------------AtSPL3<-----------RAV1(1)  --------->KAN4(2)  <------ZmHOX2a(1)-----   ggcgagtcgaagaattaatcaagtacgatttcatgaagtctctgttgcgaatgatggaagtatattcttttgatacggagaggaacctagctagggtttt  9356100                                                                                  <---------ARR11(3)                                                                                  --------->ARR11(3)                <-----------ARR10                                                 --------->ARR14(2)                --------->ARR11(3)            ------->TEIL                        <---------ARR14(2)                --------->ARR14(2)       --------->At4g35610                     <---------RVE1(1)        <----------DOF2                 <---------ARR14(2)                       <---------GLK1(1)       <---------DAG2                   --------->ARR14(2)                       <---------CCA1(2) --------->ANAC58              <------ZmHOX2a(2)                                 --------->GLK1(1) <---------ANAC55(2)  --------->LBD16   --------->GLK1(2)                <------ZmHOX2a(2) --------->ANAC58<---------GLK1(1)     <---------GLK1(2)         --------->AHL20(2)      ---------->ID1 --------->ANAC55(1) <---------LBD16--------->ANAC46         <---------AtLEC2   --------->ARR14(2) --------->ANAC55(2)<---------LBD16 --------->ANAC58      --------->ANAC46      <---------ARR14(2) >>>>>WRKY18    <---------ARR11(3)  --------->ANAC58 <---------ARR14(2) <---------ARR11(3)          - ------>HVH21   <---------ARR14(2)--------->MYB52(1) --------->ARR14(2) --------->ARR11(3)         <-   gacaggtaaccttttgagtatctccgggatgagatcaaacggaatctgaaccgagtttccactgcatgtaattagatcatcggatatcttcgtcttcttc  9356200                              ---------->DOF2                            --------->ANAC58                  <------NtERF2                                                                 -----                  --------->At5g28300                                                          ------                <---------ANAC46                                                              <------           <---------AtLEC2 --------->ANAC58    --------->ZAT14                              <-------        *TSS    <---------DREB2C(2)             <---------ZAT14      <------ZmHOX2a(1)      <------ZmHOX2a(1) ----->ZmHOX2a(2)----------->GT1            <-----------GT1        <---------TOE2(3)    ---------->DOF2 --------GLK1(1)<---------DEAR3(1)   <------NtERF2                 <---------TOE1(3)  <---------YAB1   gatctctgtttctccatggcggtgataagaacgaaaggcatcgatttgacttcacagtgagaaaaacttaaggaataagagaagaaatatgaaaggacgg  9356300                                                                                                    -                                                                                                  ---              <---------RAP2.6(3)                        <---------YAB1                         <----             <---------ANAC58                      ------>NtERF2                        --------->ANAC58             <---------ANAC58                      <---------RAP2.6(3)                  --------->ANAC55(2)             <---------ANAC46                     <---------ANAC58                      --------->ANAC58       --------->ALFIN1                       <---------SPL7                            <---------ANAC55(2)      ------->MYC3                <---------YAB1  <---------ANAC46                     <---------LBD16      <-------MYC3             ---------->TaMYB80 <---------ANAC58                   ----------->HVH21 ---->At5g28300     <-----------GT1          <---------ANAC58               ----------->HVH21 ------- ----->GT1<---------PCF2    <------MYB83     <---------ANAC58    <------ZmHOX2a(1)  <-----------HVH21 ---DEAR3(1)<------NtERF2   <------MYB46(1)<-----------HVH21   <---------TOE2(3)  ------->TEIL<------ --ORA47(1)------>NtERF2  <--------P      --------->ANAC46 --------->YAB1  ----------------------->TaNAC69(2)   tgaaaaaacgtggtgccgttttaaacgggttggaatatgactaaacgtcgtgccgtcttattaataaggaagaaacttttgacgcatgtcacggatttaa  9356400        --------->ARR14(2)      <-------MYC3                                                                           <-------      ------->MYC3                                                                          <--------     --------->ANAC46                                                                       ---------   <---------ALFIN1     --------->ATHB51                                               ------->GAMYB  --------->ZAT14       <---------ICU4                                              --------->MYB52(1)  <---------ZAT14       <--------HAHB4                                           <---------ANAC55(2)  <---------REM1(2)    <---------YAB1                                            --------->ANAC55(2) -------->ANAC46       --------->ICU4                                            <---------ANAC46 ------>ZAT6        <---------YAB1                                               <---------ANAC58 -------GT1--------->ZAT6 <---------YAB1                                         <---------ANAC58 -->AHL20(2)   --------->YAB1                    <---------LBD16    ----------->GT1 <---------ARR14(2) ---AHL20(2)   <---------ICU4            --------->ANAC46         <---------ANAC46  --------->ARR14(2)   acactacacgtttccactaatgaccattattaatccattatacacactaaattcggaatttagatgggccttgtaaaattgtttcgtaaccgaaataaat  9356500      --------->AHL20(2)                            <---------AHL20(2)      <---------AHL20(2)                       <---------ARR11(3)  --------->ARR11(3)                           --------->AHL20(1)                             <------  <---------ARR11(3)                    <----------ID1                                        <------ --AHL20(2)       ------>MYB46(1)     ---------->DOF2---------->DOF2                          <------ -AHL20(2)        ------>MYB83  <---------ZAT14--------->AHL20(2)     --------->YAB1<---------YAB1 >AHL20(2)<---------ICU4  <------ZmHOX2a(1)    <---------AHL20(1)   --------->AHL20(2)       --------   ggaagattttaaatatgaccaaatgtaaggagactgtattgaaagacaaaatattaaaagttatttgagttttaataagttttggtatgattctggtcaa  9356600                                                          --------->CCA1(2)         --------->MYB59                             <---------YAB1 <-------GAMYB                                     --------->YAB1 ---WRKY38(1)                                      <---------ICU4           --------->TOE2(3) ---WRKY45                                 <---------At4g35610              --------->TOE1(3) ---WRKY12 <------ZmHOX2a(1)               --------->At4g35610              <---------MYB59 ->WRKY18(1)                    <-----------GT1   --------->ICU4         <-----------GT1   cttggttgaattaggaaatttgttattcaaattttttcaaaattcagctaaaattatgagatttgaatttgtttttaacctaaaatttttcttgaattgt  9356700  Previous    Next  AGI:  At2g21930.1    Description:  F-box family protein. Identical to F-box protein At2g21930 [Arabidopsis Thaliana] (GB:Q9SJ06;GB:Q6DR39;GB:Q84RL5); similar to F-box family protein [Arabidopsis thaliana] (TAIR:AT4G38870.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN75235.1); contains InterPro domain F-box associated type 3 (InterPro:IPR013187); contains InterPro domain F-box associated type 1 (InterPro:IPR006527) Range:  from: 9354721    to: 9356208    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version