Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                 --------->ARR14(3)                                                                               --------->AGP1                                                                               --------->ARR11(3)                                                                               <---------ARR11(3)                                                                               <---------ARR14(3)                                                                               --------->ARR14(2)                                                                               <---------ARR14(2)                                                                              <---------GLK1(1)                                                                              xxxxxxxxxxxxxxxxxxxxxxx                                                                            <------ZmHOX2a(1)                                                                         <-----------RAV1(2)                                                                         xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                                                      --------->ZAT14                                                                      <---------ZAT14                                                                      --------->ZAT18                                                                 <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                                                              <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                         xxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                                                       <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                                                    <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)            <---------ANAC58                  --------->ARR14(2)xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)            <---------ANAC58                 xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                 --        <xxxxxxxxxxxxxxxxsmallRNA(s)         xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                 <--        xxxxxxxxxxxxxxxx>smallRNA(i)         xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)            <------        xxxxxxxxxxxxxxxx>smallRNA(s)        xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)--------->CCA1(2) ---       --------->ALFIN1         <---------YAB1<---------ARR14(2)<------NtERF2 --------->GLK1(1)------       <xxxxxxxxxxxxxxxxsmallRNA(s)  --------->ATHB12 <xxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)      xxxxxxx     <xxxxxxxxxxxxxxxxsmallRNA(i)   <---------AHL20(2)xxxxxxxxxxxxxxxx>smallRNA(i)   xxxxxxxxxxxxxxxx --------------AGL1           --------->YAB1<xxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)<------ZmHOX2a(2)<--- ----->ANAC46            <---------ZAT2     xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)------>ZmHOX2a(2)--- --->P<xxxxxxxxxxxxxxxxsmallRNA(s)  --------->AHL20(2)xxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)   ---------   ccccaagaggtctggggttcgagtcccagctattgtgatttattagcaaatttgcagattaatggaggcaagtgtacaggagatctacaacgaagtataa  9337800                                                ---------->DOF2                                               <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(s2)                                               <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(l2)                                               <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                                        --------->ARR11(3)                               <---------ARR14(2)                               <---------ARR11(3)                               <---------ARR14(3)                               --------->ARR11(3)                               --------->ARR14(2)                               --------->ARR14(3)                             ----------->ARR10 <xxxxxxxxxxxxxxxxsmallRNA(i)      <---------MYB52(1)  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3) >smallRNA(le3)           <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3) -------->DOF2            <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3) -------ICU4            xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                              <---------- ---YAB1             --------->ANAC46   <---------ARR11(3)                           --------->AHL20(2) ----->HAHB4   <---------ARR11(3)       xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)        <---------AHL20(2) --->YAB1      --------->ARR11(3)      <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)  ----------->GT1 xxxxxxxxxxxxxxx>smallRNA(si3)xxxxxxxxxxxxxxxxxxxx>smallRNA(se3)             <---------ANAC55(2) xxxxxxx>smallRNA(le3) xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(l2)xxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)     -- ------YAB1  --------->ICU4 xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)<------ZmHOX2a(1)    --------->AHL20(1) ------>YAB1 <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)         xxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)   <--- >YAB1<xxxxxxxxxxxxxxxxsmallRNA(i)  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)--------->ARR11(3)<<<<<<<<<GATA-1   ttatagccgtttgtcaagattttacgcagagaagatattgaagatgtccattaagcgcatggagaaggataagaagattatgtaaaattttttatctata  9337900           <---------------AGL15        <-----------GT1   <---------AHL20(2)                                  --------->ZAT2  --------->AHL20(2)                     ---------->DOF2                             <----------DOF2  <---------AHL20(2)                  ----------->TBP  <---------ZAT2         ------------>CBF -GT1 <---------AHL20(2)       <---------ZAT18      --------->MYB46(3)       <-----------GT1 ------->YAB1                 <---------ZAT6  <---------GLK1(1)     <---------AHL20(2)        ------- --------TBP      ----------->GT1   --------->YAB1 --------->ANAC46 --------->AHL20(2)   <-----------GT1   tttataaatttatctagtcatggtaatatgtagtgcaaatataaaaagaaatcacccagcatagaaacatttaaaatttcaacaattctttaaactacat  9338000                                <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)        ------------>CBF       ----------->HVH21       ------>ZmHOX2a(1)     --------->bZIP60(1)   --------->ARR14(2)        <---------bZIP60(1)   <---------ARR14(2)        <---------bZIP60(2)                        --------->ZAT6  --------->GLK1(1)       <---------ATHB12  --------->ANAC46     <---------AHL20(2)   <---------HSFC1(2) -->REM1(1)     <---------CCA1(2)         <-----------GT1    <---------ATHB12         --------->HSFC1(2)   ccacaaatccttcaattcttatcttcaaatgatgtgacatatttttaccccactaaaattccactaattcatttacacttgggttagacccttcttacat  9338100                                                                                                    <                                                                                                    <                                                                                                  <--                                                                                                  ---                                                                                                 <---                                                                                                 ----                                                                                                 ----                                                                                                <----                                                                                                <----                                                                                               ------                                                                                             <------MYB46(1)              --------->MYB52(1)                                                             <-------              <---------ARR14(2)                                                             <------MYB83              --------->ARR14(2)                                                           <--------P           --------->YAB1                                                                 <-------GAMYB     --------->ANAC58                                                    <------ZmHOX2a(2)<---------ANAC58     --------->ANAC58   <-----------HVH21                            <--------P           <---------ANAC58    ------>NtERF2------->GAMYB                                     ----------->GT1       <---------MYB46(3)   <---------ALFIN1 <---------ARR11(1)                            <---------YAB1         <------MYB46(1)  --------->MYB46(3)--------->ARR14(2) ---------->DOF2         <---------ARR14(2)        <------MYB83   gttccccaccctagcataaccgaatcgttcacagatagagagaaagagagagattagaagaaacaaatatggtagatcaaaatagagcatttggttgggc  9338200         <---------ARR14(2)         --------->ARR14(2)         ------->TEIL         --------->GLK1(2)    ------->GAMYB                                      --------->DOF5.7(2)   --------->MYB46(3)                                <---------ANAC58 --------->MYB52(1)                                  <---------ANAC46 ---------WRKY38(1)                                  <---------ANAC58 ---------WRKY12                                  <----------DOF2 ----NtERF2                                      <---------ANAC58                 --------->AHL20(2) --->NtERF2                                      <---------ANAC58               --------->ANAC46 ------ATERF1(1)                            <---------HSFB2a(1)                 --------->ANAC55(1) -->NtERF2                                  --------->HSFC1(2)               --------->ZAT14 ----->RAP2.6(2)    ------>ZmHOX2a(1)       <---------HSFC1(2)               <---------ZAT14 -----RAP2.6(2)  <------NtERF2              --------->HSFB2a(1)              --------->ZAT18 -----DEAR3(1)  <---------SPL7         <---------HSFB2a(2)               --------------->AtSPL8 --->ATERF1(1) <---------ANAC58        --------->HSFB2a(2)               <---------------AtSPL8 --MYB46(3)    <---------ANAC58        <---------HSFC1(1)   <----------DOF2  <---------ZAT18   <-----   ggccaacgacgaatcgggcgtcctctctccatttcatttctctagaaggttcctttcgtttacttttgagttttgagagtacacttaattagtctctgat  9338300                                                                                    <---------ANAC46                                                                                   <---------AtMYB61                                                                                 <-----------RAV1(1)                                                                          ------>ZmHOX2a(2)                                                                         <------ZmHOX2a(2)                                                                        <---------ARR14(3)                                                                        <---------ARR11(3)                                                                        --------->ARR14(2)                                                                        <---------ARR14(2)                                                                        <-----------ARR10                                 --------->ATHB51                       --------->ARR11(3)                                 --------->ATHB12                       --------->ARR14(3)                                <---------YAB1                          <---------AGP1<---------ANAC46 <----------DOF2                <---------AHL20(2)           ----------->HVH21   <---------ANAC46   - ----GLK1(2)          <---------AtMYB61         ----------->GT1       ----------->ARR10             <   tctctttcacaaattttgtatgttttggtgtcatattattgcagagaaaatggtgagaacgatgtaacagtgaagatcttgttctgtggtgtttgtcact  9338400                                                         <---------ARR14(2)                                                         --------->ARR14(2)                                                     <---------TOE1(2)                                                     --------->LBD16                             --------->GLK1(2)      <---------ANAC46                            <---------ARR14(2)      --------->LBD16                            --------->ARR14(2)      <---------LBD16                            <---------GLK1(2)      <---------LBD16  ------>ZmHOX2a(2) --------->ATHB12           --------->KAN4(2)   <---------ANAC58 -------->ARR11(3)>>>>>>>>>>>>>>>>>LFY        <---------ICU4 <---------YAB1                     ----- ---------ARR11(3)<<<<<<<<<<<<<<<<<LFY        --------->ATHB51     <---------ANAC58<---------YAB1   ctgatcttcataccatcaagaaccattggggattctctcgttaccccattattcccgggtattctcattacttgccatttctcttatcaatgctcccaaa  9338500                                                                                      <---------WRKY18(1)                                                                                     --------->WRKY45                                                                                <------MYB83                                                                     --------->YAB1  --------->WRKY12                                                                     --------->AHL20(2)                       <---------AHL20(2)                            <---------AHL20(2)            <---------MYB46(3)                                   <---------YAB1 <------MYB46(1)  <---            <-----------RAV1(1)                                 <---------AHL20(2)   --------->WRKY38(1)          <----------DOF2      <----------DOF2       <---------TOE1(2)<---------AHL20(2)        <----      <-----------GT1  --------->AHL20(2)            <---------TOE1(3)<---------AHL20(1)        <----  <---------YAB1    <---------ARR11(3)               <---------TOE2(3)--------->AHL20(1)    --------- ---->ARR14(2)      --------->ARR11(3)   --------->YAB1         --------->AHL20(2)--------->ALFIN1---   tattcttatttcctttgttggagattttattagctttatagaataagaaatgtctaaggtttggattaaaattatattggctaggtgttgaccctctccg  9338600                                                  <---------AHL20(2)                                                  --------->AHL20(2)                                                  --------->AHL20(1)                                               --------->AHL20(2)                                               <---------AHL20(2)                                              <---------AHL20(2)                                              --------->AHL20(2)                                             <---------YAB1                                           --------->YAB1        <-----------GT1                                           <--------HAHB4      <---------YAB1        <---------ANAC58                  <---------YAB1     <---------ICU4        <---------ANAC58                  --------->ICU4    --------->ICU4 ------SPL1(1)                          <----------DOF2     <---------YAB1 -----SPL7                            --------->LBD16    --------->ICU4                         ----- -----SPL1(2)                     <---------ARR14(2)  <-----------GT1                    <---------ANAC58 --------->SPL14                  --------->ARR14(2) <---------YAB1--------->MYB46(3)    <---------ANAC58 ------>SPL7                    ----------->ARR10 <---------AHL20(1)        <----------DOF2     -----   tacgattagggcttagcagttttgagcattggacaagttccgctattattaatttattactgattattaacaactatacttttgttaatttgctaggcat  9338700  Previous    Next  AGI:  At2g21890.1    Description:  mannitol dehydrogenase, putative. similar to mannitol dehydrogenase, putative [Arabidopsis thaliana] (TAIR:AT2G21730.1); similar to putative sinapyl alcohol dehydrogenase [Populus tremula x Populus tremuloides] (GB:AAM95578.1); contains InterPro domain Alcohol dehydrogenase GroES-like (InterPro:IPR013154); contains InterPro domain NAD(P)-binding; (InterPro:IPR016040); contains InterPro domain GroES-like (InterPro:IPR011032); contains InterPro domain Alcohol dehydrogenase, zinc-binding (InterPro:IPR013149); contains InterPro domain Alcohol dehydrogenase superfamily, zinc-containing; (InterPro:IPR002085) Range:  from: 9338169    to: 9339726    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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