Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                              >>>>>>>>>E2Fd                                            >>>>>>>>>E2Fc                                           --------->LBD16                                           ------>NtERF2                                          --------->ANAC58                                          <<<<<<<<<<E2Fa                                          --------->ANAC58                                      <-----------GT1                                     <xxxxxxxxxxxxxxxxsmallRNA(i)                                   <xxxxxxxxxxxxxxxxsmallRNA(s)                                   <xxxxxxxxxxxxxxxxsmallRNA(i)                                 <---------MYB52(1)                                --------->LBD16                               --------->ANAC58                               <---------ANAC55(2)                               --------->ANAC55(2)                               --------->ANAC55(1)                               --------->ANAC46                               --------->ANAC58                             xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                           <xxxxxxxxxxxxxxxxsmallRNA(i)                          <xxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                          <xxxxxxxxxxxxxxxxsmallRNA(i)                          <xxxxxxxxxxxxxxxxsmallRNA(s)                         xxxxxxxxxxxxxxxx>smallRNA(s)                        --------->TOE2(3)<---------LBD16                        <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                        <xxxxxxxxxxxxxxxxsmallRNA(i)                       <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)              ------>ZmHOX2a(1)----------->GT1          <-----------GT1xxxxxxxxxxxxxxxx>smallRNA(i)        <---------MYB52(1)             ---------       <---------ARR11(3)<xxxxxxxxxxxxxxxxsmallRNA(s)       --------->LBD16        <---------CCA1(2)     <---------ATHB12  <---------ANAC55(2)--------->ANAC46 <---------ANAC55(2)  --------->TOE2(3)     --------->ICU4    <xxxxxxxxxxxxxxxxsmallRNA(i)     xxxxxxxxxxxxxxxx>smallRNA(s)<---------ARR14(2)     <---------YAB1   <xxxxxxxxxxxxxxxxsmallRNA(i)--------->DAG2               ----------->GT1      -  <xxxxxxxxxxxxxxxxsmallRNA(i)<xxxxxxxxxxxxxxxxsmallRNA(i) --------->ANAC55(2) <---------ANAC55(2)  - --->TOE2(3)xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3) ---------->DOF2      <---------ETT(1) ----------->GT1   taaacccatgattttcctgctaaaaacgtaaacccgtaattttcccgccaaaaaagtaaacccgtgatttttccgacaaaaacgtaaatctgtaattttt  9321900                                                                                                    <                                                                                                  ---                                                                                                  <--                                                                                                  <--                                                                                                  ---                            <xxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                     <--                            >>>>>>>>>E2Fc                                                         ---                           <xxxxxxxxxxxxxxxxsmallRNA(i)                                          ----                           ------>NtERF2                                                         <---                           --------->LBD16                                                     ------                          --------->ANAC58                                                     <-----                          --------->ANAC46                                                     ------                          --------->ANAC58                                                     <-----                          <xxxxxxxxxxxxxxxxsmallRNA(i)                                         <-----                          <xxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                 <------                         <---------LBD16     --------->LBD16                                  -------                         <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                 -------                        xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                               ---------                        <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(s2)                               --------->AHL20(2)                        <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                              <---------AHL20(2)                   <---------ARR11(3)       ----------->GT1                               --------->AHL20(2)                 <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                    <---------AHL20(2)           --------->GLK1(1)>>>>>>>>>E2Fd   --------->ANAC46       --------->ARR11(3)  <---------AHL20(2)        --------->TOE2(3)<xxxxxxxxxxxxxxxxsmallRNA(s)              <---------ARR11(3)  <---------AHL20(1)       <---------ANAC55(2)<<<<<<<<<<E2Fa   <---------LBD16         --------->AHL20(1)  --------->AHL20(2)     <xxxxxxxxxxxxxxxxsmallRNA(s)   --------->TOE2(3)             --------->CCA1(1)    --------->AHL20(1)     <xxxxxxxxxxxxxxxxsmallRNA(i)  <---------ANAC55(2)            --------->RVE1(1) --------->YAB1--- >ICU4 ----------->GT1xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)  --------->LBD16       <---------YAB1<--- ---------------->AG  <xxxxxxxxxxxxxxxxsmallRNA(i)       --------->ARR14(2)      --------->YAB1------ ---------------->AGL1<-----------GT1 ---------->DOF2    <---------ARR14(2)     <---------YAB1<------   ctgccaaaaacgtaaatccatgattttcccgccaaaaacgtaaaccccgtaaaaaatggaatccgaaaatatcttaagtttgatgataataaattaataa  9322000       <---------YAB1     --------->YAB1     -------->HAHB4     <---------ICU4                               -------->ATHB1    --------->ICU4                                --------->ATHB51    <---------ATHB51                              <---------ICU4  --------->YAB1                              <---------AHL20(2) ---------YAB1                                --------->AHL20(2) ------>ATHB51                           <---------AHL20(1) ------HAHB4                             --------->AHL20(2) -------ICU4                             --------->AHL20(1) ----->ATHB1                             <---------AHL20(2) -------AHL20(2)    <---------YAB1    --------->YAB1    --------->TOE1(2) ----->HAHB4      <---------AHL20(2)  --------->ATHB51 <---------ANAC55(2) ----->ICU4      --------->AHL20(2)   <--------ATHB1   <---------ANAC58 ------YAB1      <---------AHL20(2)   -------->HAHB4   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) --->YAB1     <---------ICU4          <--------HAHB4   <---------ANAC58 ---ATHB1     <---------AHL20(2)      <---------ICU4   --------->ANAC55(2) -->HAHB4     --------->AHL20(2)     <---------ATHB51  <---------O2 ---HAHB4  --------->YAB1            --------->ICU4    <---------bZIP60(2) ----ICU4 <---------YAB1             <---------YAB1    <---------ANAC55(1) ---YAB1--------->YAB1             <---------ICU4<---------ATHB51 -->ICU4-------->HAHB4             --------->YAB1<---------AHL20(2) -->AHL20(2)  --------->ATHB51    --------->ICU4 --------->AHL20(2) >YAB1 --------->ICU4--------->ATHB51--------->AHL20(2)<---------ANAC46 ------>YAB1 <---------YAB1       <---------YAB1 --------->ICU4           --------->MYB46(3) ------ATHB51--------->ICU4     --------->YAB1--------->AHL20(1)         <xxxxxxxxxxxxxxxxsmallRNA(s) --->ATHB51<---------ICU4      <---------YAB1--------->AHL20(2)         <-----------GT1 ---ATHB51--------->ICU4     --------->YAB1  <---------AHL20(2) --------->GLK1(2)   <xxxxxxxxxxxxxxxx   ttattaataatgataattatttattattgttttataataataattaattaaattattacgtgggataatctatttaacaactcaactcatcaaatgaaat  9322100                                                                               xxxxxxxxxxxxxxxxxxxxxx                                                                              <xxxxxxxxxxxxxxxxxxxxxx                                                                           <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                                                                          <-----------------AGL1                                                                         <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                                      <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                                                                     <------MYB46(1)                                                                     <------MYB83 <xxxxxxxxxxxxxxxxxx                                                                    xxxxxxxxxxxxxxxx>smallRNA(s)                                                                    <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                                    --------->MYB59                                                                   xxxxxxxxxxxxxxxx>smallRNA(s)                                                                   xxxxxxxxxxxxxxxx>smallRNA(i)                                                              xxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                                                             <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)               --------->ANAC58                              xxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)               --------->ANAC58                            xxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)             <---------WRKY45                            xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)             <---------WRKY38(1)                         <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)             <---------WRKY12                            xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)            --------->WRKY18(1)                         xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)           <-----------HVH21                            xxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)          <---------ANAC46                              xxxxxxxxxxxxxxxx>smallRNA(i)          <------MYB46(1)            --------->ZAT14    xxxxxxxxxxxxxxxxxxx>smallRNA(fl3)          <------MYB83           --------->ZAT6         xxxxxxxxxxxxxxxxxx>smallRNA(fl3)         <------MYB46(1)       <-----------GT1          xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)         <------MYB83     <--------HAHB4                <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)         --------->MYB59  <---------ICU4                xxxxxxxxxxxxxxxx>smallRNA(s)<---------ALFIN1         <---------MYB46(3)  xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3) xxxxxxxxxxxxxxxx>smallRNA(i)        --------->ALFIN1  --------->ATHB12             xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)       <--------P<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)       <<<<<<<<<MYB98    <---------ATHB12              <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)      <---------ANAC58 <-----------GT1                 <xxxxxxxxxxxxxxxxxxxsmallRNA(fl3)  ------>ZmHOX2a(1)      <---------ANAC58<---------AHL20(2)               xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)  <XXXXXXXXXXXXXXXXXXXXXXXMIR405A/B/D<---------ZAT14   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3) --------->CCA1(2)    --------->AHL20(2)          <---------ICU4xxxxxxxxxxxxxxxx>smallRNA(i)     <--- xxxxxxxsmallRNA(si3)--------->AHL20(2)   --------->ATHB12 <---------ANAC46<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)   gagttatgggttgggtcaacccatttaatcatttaactctaaactgatttgataatgagttgagttgagttgggttacccatttcgacactcctacttgt  9322200                                         <------------CBF                              ------>ZmHOX2a(1)             <---------ANAC46           <---------ICU4                          --------->ZAT18             <---------ANAC58      <---------MYB52(1)                           <---------ZAT14   ----------->GT1               ----------->GT1                                <---------ZAT18 x>smallRNA(i2)              --------->ANAC58             <---------AHL20(2)    --------->ZAT14   *TSS xsmallRNA(l2)  <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)      --------->AHL20(2) <---------ANAC46   ----- xxxxxsmallRNA(si3)   ------->TEIL<-------GAMYB       <---------AHL20(2)     <---------ANAC58   ----- ------ZAT18 <---------ANAC58--------->ANAC58        --------->AHL20(2)      <---------ANAC58 <------   gggcttagtgaaatttcgtagatgtatatgtaagcccgttaaacattgtatacgatttaataaaacagaacgacttgtttcgtgcactcctcccactatc  9322300                                                                                                    -                                    --------->WRKY38(1)                                         <----                                    --------->WRKY45                                           ------                            <---------CCA1(2)                                                  ------                        ------>ZmHOX2a(2)                             <---------ATHB12         <-----                       <---------GLK1(1)                 --------->ANAC58                      <-----                      --------->ARR11(3)                 --------->ANAC58                --------->ANAC58 ---->YAB1            <---------ARR11(3)            <---------At4g35610          --------->WRKY12---- ---->TOE2(3)         <---------AGP1--------->WRKY12--------->At4g35610  ------->TEIL    --------->ANAC58 ---ARR11(3)         <---------CCA1(2)            <------NtERF2       <---------YAB1     --------->ANAC46   ttaaatctaaaaaaaaaaactttggatctcatctctcgttgacttcgatggcagagctcaagcatttctcccatgaatgcccattgacttcacccaagat  9322400           --------->GLK1(1)          --------->ARR14(2)          <---------ARR14(2)     <---------LBD16   <---------ETT(2)   --------->ETT(2)   ----------->HVH21   <---------DEAR3(1)   --------->DEAR3(1)   <---------WRKY12   --------->WRKY12  --------->ATERF1(1)  <------NtERF2 ------>NtERF2 <---------ATERF1(1) <-----------HVH21 -------->DEAR3(1)                                <---------ANAC46 --ZmHOX2a(2)                                     <---------ANAC58 --->ARR14(2)                                     <---------ANAC58 --->ARR11(3)                           --------->REM1(2)                           <--------P     -- ----ARR14(2)                      --------->ARR11(3)                            <---------TOE1(3) <- ----ARR11(3)                  --------->YAB1     <---------AtLEC2               <---------TOE2(3) -- -->ZmHOX2a(2)              ---------->DOF2   <--------P                       ---------->DOF2   <---   cgccgtcgacgggatttgcagcatttgctacaaagatgaccttgtcgagttggcatgtagcccttgcgatttcagtctctgtaaaggttgctctcaactt  9322500                                     <---------HSFB2a(2)                           <---------TOE1(2)                                     --------->HSFB2a(2)                      <-----------HVH21                             =============HOX2a_HOX2a                        <---------O2                 --------->GLK1(1)  <---------LBD16            --------->YAB1--------->bZIP60(2)       --------->ALFIN1      <------ZmHOX2a(2)                <------ZmHOX2a(2)  <---------SPL7      <---------ARR14(2)    <---------ARR14(2)            --------->SPL7     --------->ANAC46      <---------ARR11(3)    <-----------ARR10       ----------->RAV1(1)      --------->O2    --------      --------->ARR11(3)    --------->ARR14(2)    --------->At4g35610 --------->TOE2(3)   --------->LBD16 ------->LBD16--------->ANAC58     ------>ZmHOX2a(1)=============================RAV     <---------ANAC46 --------At4g35610        --------->LBD16         <---------ZAT14     --------->TOE1(3) <------------ ------->At4g35610      <---------LBD16           --------->ZAT18    ----------->RAV1(2)<---------LBD16 ------LBD16  --------->ANAC58     ==================================HOX2a_HOX2a<---------ANAC46   --   ccgcagaaggtctggcacgatttccatccggatcatcctctggaattttgtctgcaccagtacgatcagaaacctgaacacgtcgtatgctccgggtgtg  9322600                                                                        <---------ANAC46                                                                        <---------ANAC58                                                                        <---------ANAC58                             ---------->DOF2                    <---------At4g35610                    <---------HSFB2a(2)                       --------->ZAT18                    --------->HSFB2a(2)   --------->CCA1(2)   --------->ZAT14                     --- ->ALFIN1           --------------->AGL15--------->ARR11(3)   <---------ZAT14           <---------ANAC46 -----AGL1      <----------DOF2    --------->ALFIN1       <---------DEAR3(1)           --------->ZAT2 --------->RAV1(1)  <---------------AGL15<---------ARR11(3)   <---------ZAT18     <-----------RAV1(2)   gcaacatgacttctggctctttctataagtgtaaagagtgtgagatatacttggacatgggctgtgcgctcattgcgagcatcttcaggggctgggatag  9322700                                                                    <---------ANAC58                                                                    <---------ANAC58                                                                   <-------TEIL                                                     <-----------RAV1(2)                                             <---------ARR14(2)   --------->GLK1(2)                                             --------->ARR14(2)   --------->ARR14(2)                                           ----------->ARR10      <---------ARR14(2)                                        <---------REM1(1)--------->ANAC58                                        <---------ANAC46 --------->ANAC46                  <---------ALFIN1                                        --------->ALFIN1 --------->ANAC58         <---------ZAT18                               <---------ANAC58  --------->LBD16  --------->ARR11(3)--------->At4g35610 ------->DOF2 ---------->DOF2  <---------ANAC58<---------LBD16    <-----------ARR10 <---------At4g35610   caaagacttgctccattacagccattgccacttgcttaagaggtgtagacccggaccagacgctagaggttcttgccttctctgtgagcttcccctctct  9322800  Previous    Next  AGI:  At2g21850.1    Description:  protein binding / zinc ion binding. similar to DC1 domain-containing protein [Arabidopsis thaliana] (TAIR:AT2G21830.1); similar to protein binding / zinc ion binding [Arabidopsis thaliana] (TAIR:AT2G21840.1); similar to DC1 domain-containing protein [Brassica oleracea] (GB:ABD65623.1); contains InterPro domain Protein kinase C, phorbol ester/diacylglycerol binding; (InterPro:IPR002219); contains InterPro domain C1-like (InterPro:IPR011424); contains InterPro domain Zinc finger, PHD-type; (InterPro:IPR001965); contains InterPro domain DC1 (InterPro:IPR004146) Range:  from: 9322298    to: 9325318    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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