Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                             --------->ZAT18                                                                           <---------ZAT18              <------MYB83                                              <---------ANAC46             <---------AtMYB61                                          <---------ANAC58 ------->GAMYB<------MYB46(1)                    <---------ICU4         <---------ANAC58 ------------AtMYB77    <---------MYB52(1) <------ZmHOX2a(2)    <---------ZAT2 ------>P    --------->MYB59 ---------->DOF2------>ZmHOX2a(2)   <---------At4g35610 ----->MYB46(3)        <-------GAMYB      <---------ARR11(3)    --------->ZAT2        --------->ANAC46 -----At4g35610     <---------At5g28300   --------->ARR11(3)    --------->At4g35610 <---------ALFIN1 ---->At4g35610   ----------->HVH21    <---------KAN4(2)   <---------bZIP60(1)      --------->ZAT6---   caaccgtagccgagtttggtctcaccgttgagaaagaagagaacgatctcattagtacatgacttcagctcgtagagtgcatcccaacactgcatcagtc  9290700                                             <------NtERF2                                           <---------ANAC58                                       <---------TGA1a                                       --------->TGA1a                                      ------>NtERF2                                   <-----------HVH21                                  --------->ANAC58                                  --------->ANAC58                               <---------ARR14(2) --------->ZAT14                               --------->ARR14(2) <---------ZAT14                         <------MYB46(1)------->PIF5   <---------At4g35610                         --                         <------MYB83--------->DEAR3(1)--------->At4g35610                -----------      ===========================================MYC_MYB                                 --------->At5g28300      <--------P--------->RAP2.6(2)------>NtERF2  <---------ZAT18                       ----------->GT1      <---------MYB52(1) <---------MYB46(3)<---------ANAC46                            <---------ANAC46     <---------MYB52(1) <---------AtMYB61  <---------ANAC58                            <---------DEAR3(1)    --------->LBD16  <-----------RAV1(1)<-------PIF5   --------->ZAT2                --------->MYB52(1)  <---------LBD16<---------RAP2.6(3) <---------ALFIN1  <---------ZAT2               ----------->HVH21 ------>ZmHOX2a(1)<---------MYB52(1)----------->HVH21 <-----------RAV1(1)           ----------->TGA1< --->ZmHOX2a(1) --------->ANAC46  --------->ANAC46--------->ZAT18           <------ZmHOX2a(1) -------   ctcctccggttagtctagccgctatgttggtggaatccgccacgggcgggagtgctctgctggagacgttgagaacgaggagaagagtgacggtgacaaa  9290800                                                      <---------ANAC46                                                      <---------ANAC58                                                      <---------ANAC58           --------->At4g35610                                            <-----------RAV1(1)                  <---------At4g35610                                      <---------ARR14(2)                  <------MYB46(1)                >>>>>>>>>>>>>>>>>LFY  <---------ARR11(3)                  <------MYB83              <               --------->ANAC46       --------->ARR11(3)              <---------ARR14(2)     -------- --------->GT1 --------->ANAC58       --------->ARR14(3)              --------->ARR14(2)    <-------- >HVH21 <---------ZAT6                <---------GLK1(2)    <---------AtMYB61  ----------->ARR10   --- ------ZmHOX2a(1)             <----------DOF2     <------------CBF   <------ZmHOX2a(1)    --------->YAB1 --->DOF2      --------->ANAC58       <---------ARR14(3)----------->HVH21--------->MYB59<-----------TBP   gaggaaacttgtgttagaagccattgtgttttcttttgaagattttgtgttgtattgtgtgatggtttagaggatttggtaagagctgctatttataata  9290900                                    ---------->DOF2                                  <---------YAB1                                --------->ATHB12                             --------->YAB1                                                   -------                             <---------ICU4                                       <---------ICU4                            --------->ICU4                                        --------->ATHB12             --------->ARR11(3)--------->ICU4                                    <---------YAB1 -----            <------ZmHOX2a(1)-------->HAHB4                                      --------->ICU4 -----   <---------YAB1           <---------ATHB51                                     <---------ATHB12   --------->ICU4        <---------AHL20(2)                             <------NtERF2         <------ ---------YAB1      <---------TOE2(3)     ----------->GT1            --------->ZAT18   <-----------GT1 ->YAB1 ---------->DOF2  --------->AHL20(2)                     xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3) -YAB1<---------YAB1<---------TOE1(3)<---------TOE2(3)      --------->ALFIN1    <---------TOE2(3) -------->GT1<---------ARR11(3)<---------YAB1           <------ZmHOX2a(1)  <---------ZAT6    <-------   ctgtgattatgaaaggatttttgaggtttaattatgattaaagatggtttttagtggaggaagtgggagagggcagagagttaatgattttacttaaatc  9291000                                                                            --------------->AGL15                                                                            <---------------AGL15                                                                           <-----------------AGL3                                                                       --------->ANAC55(2)                                                                       <---------ANAC58        ------->TEIL                                                   <---------ANAC58     <---------ANAC55(2)                                          <---------MYB46(3)     --------->ANAC55(2)                            --------->ANAC46   <---------ANAC55(2)     ----------->GT1                                --------->ANAC58  --------->MYB52(2)  <---------ATHB12    <---------WOX13(1)            --------->ANAC58  <-----------------------TaNAC69(2) -->ARR11(3)         <------------CBF            <-------TEIL     ----------->GT1 ---->TOE2(3)       <--------ATHB1              --------->CCA1(2)<---------ATHB12                 --- ---->TOE1(3)       --------->ATHB12       ---------->DOF2    <---------WRKY38(1)               <---- ---ARR11(3)       --------->ICU4        ------->GAMYB        <---------WRKY12                <------ --CCA1(2)         <---------YAB1     --------->MYB52(1)     ------------>CBF            <----------DOF2   ttaaatcatgtaacttagagaatgattgaataggtggtcttaacggaaagatacaagcgaagagtcaatggttacttgataaatatagaaactttgaaga  9291100                                                                                    <---------ARR11(3)                                                        ----------->RAV1(2)     --------->ANAC58   --                                                        --------->ZAT2          --------->ANAC58<----                          --------->MYB55(2)            <---------ZAT2   <---------ZAT2      -------- -------->GT1   --------->At5g28300                  ----------->HVH21   --------->ZAT2   --------->YAB1 --------CBF  *TSS        <---------MYB46(3)     <------NtERF2           <---------At4g35610 <------- ---YAB1   --------->ALFIN1 <--------P        ------>NtERF2              --------->At4g35610<--------   ttgtataacaagagtggctgtaatacagtggttagtattctacgttgaggccgaagggacctgggctcgattcccagcagacacactatctttcatcata  9291200                                     --------->MYB52(1)                                     ------>MYB46(1)                                     ------>MYB83                                    --------->MYB55(1)                                    ----------->HVH21                                   <---------MYB59                                   <---------MYB55(2)                                   <---------MYB111(2)                                   <---------MYB111(1)                                   <---------MYB46(2)                                   <---------MYB52(2)                                   --------->MYB46(3)                                            <--- ------->ARR11(3)                 <---------At4g35610                                        <------- -----ICU4         <-------TEIL   --------->ANAC46                   --------->ALFIN1        <------- ->YAB1    <----------DOF2        --------->ANAC58               <-----------RAV1(2)       --------->At4g35610 --ICU4    <---------DAG2         --------->ANAC58              <-------TEIL               <---------At4g35610 -YAB1  <---------ALFIN1         ------->TEIL           ----------->HVH21           ---------->DOF2 <   atgtcttccaacacttttagcttcatccacttatgcacctaacgcttcttctctctatatgacacatacaggtggacacatagagggaaagtcagctttt  9291300                                                                 ------>ZmHOX2a(2)                                                                <------ZmHOX2a(2)                                                                <---------RVE1(1)                                                               --------->ARR11(3)                                                               --------->AGP1                               <---------ARR14(2)              <---------ARR11(3)        <----------DOF2                               <---------GLK1(2)  <---------ARR11(1)               <----------DOF2                               --------->ARR14(2) --------->ARR11(3)    <---------At4g35610 --------GT1             <-----------GT1     --------->ANAC46 <---------GLK1(1)  <---------At4g35610 --DAG2          --------->LBD16  <-----------GT1<---------CCA1(2)<----------DOF2--------->At4g35610 ---DOF2        <---------HSFB2a(2)     <----------DOF2       --------->GLK1(1)<---------ZAT18      - ----------DOF2 --------->HSFB2a(2) <---------LBD16  <----------DOF2    --------->At4g35610  <-------   ttcttttctaatttgtctccagaagttttaccatattctccgctttcactcaaatcttttacagagatcttttcatctcagtgagctttcactttctttc  9291400                                                                                    <----------DOF2                                                                             --------->LBD16                                                                            <---------ANAC58                                                                            <---------ANAC58           <---------GLK1(2)                                                <---------ANAC55(2) ------>ZmHOX2a(1)      --------->LBD16                                     --------->ANAC55(2) -------->TOE2(3)      <---------ANAC46                      <----------DOF2<---------ANAC55(1) ---DOF2   --------->ARR11(3)     <-----------RAV1(1)   <-----------GT1     <---------ANAC46        <   atcctcaacttcagatttttgtctcccgtatagtttttgttgttgttgttgttgttattttctctttctctctgtgttccgtgtgtctttctctaaaccc  9291500                                                                         <---------ANAC46                                                                         <---------ANAC58      <-----            <---------ANAC58                                   ---------->DOF2          --------->YAB1            <---------ANAC58                               --------->TOE2(3)     <---------LBD16     <-----------GT1 <-----------GT1                      <---------ANAC55(2)   <---------ANAC46    < ---------GLK1(2)  <-----------HVH21     ----------->ARR10----------->GT1<---------ANAC58      <-----   tagaatttcacattgcttctgtgtcactcttcaaatttctgaatagatttgatcacaaaaacgtaaaaagggttttcgtattttgtggaatcacattgct  9291600  Previous    Next  AGI:  At2g21750.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G21740.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO71715.1); contains InterPro domain Protein of unknown function DUF1278 (InterPro:IPR010701) Range:  from: 9290447    to: 9290824    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At2g21760.1    Description:  pre-tRNA. tRNA-Leu (anticodon: GAG) Range:  from: 9291114    to: 9291185    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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