Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                    ----------->GT1                                                                                 --------->ANAC58  <-                                                             <---------YAB1      --------->ANAC55(1)                            <---------ALFIN1               --------->YAB1        --------->ANAC46  --                          ----------->RAV1(1)          --------->AHL20(2)        --------->ANAC58  <-                    <---------ANAC58            <-----------RAV1(2)   <----------DOF2       --------- ---DOF2            <---------ANAC58      <----------DOF2  --------->AHL20(2)   <---------LBD16    --   tctgttcttactatgctctgtttcttggcaacactgtttttgttctttgtccaggtataaattataaatgcggttttagtcacacggaaaaatccaaagg  9289000                                                                                                 ----                                                                                                <----                                                                                                -----                                                                                              -------                                                                                              <------                                                                                        <------NtERF2                                                                                       --------->LBD16                                                                                      --------->DEAR3(1)                                                                                      <---------ANAC46                                                                                     <------NtERF2                                                                                     --------->RAP2.3(1)                                                                                     --------->ATERF1(1)                                                                                     <---------LBD16                                         <---------ICU4                             <---------ATERF1(1)                                         --------->ATHB12                           <---------DEAR4(2)                                         --------->YAB1                             ------>NtERF2<---                                 <-----------GT1                                    <---------ORA47(2)                                <---------YAB1                                      <---------RAP2.3(1)                              --------->YAB1                                       --------->DEAR3(1)                             <---------AHL20(2)                                    <---------RAP2.3(2)                             <---------YAB1<---------YAB1                          <---------DEAR3(1)                          --------->AHL20(1)                                      --------->RAP2.3(1) --------GLK1(1)--------->AHL20(2)      --------->ICU4                            <---------ABI4(2)<- ------->At4g35610        <---------ARR11(3)                                      --------->ATERF1(1) --------At4g35610  <-----------GT1     <---------ATHB12        ---------->DOF2  <---------ATERF1(1) ->DOF2--------->AHL20(2) --------->AHL20(2)                 --------->TOE2(3)  <---------DEAR3(1)--- ------->GLK1(1)<---------AHL20(2)     <---------ARR11(3)  <-------TEIL       <------ZmHOX2a(1) <----   gagatgccattatatcatttaaaaaccatatattataacaaaatcattactggagtttgcatacatcaaagtttcacagaggaaggcgccggagaagaac  9289100   <---------GLK1(2)                                            --------->ANAC55(2) --------->LBD16                                                --------->O2 ----->AtMYB61                                                  --------->TGA1a            <---------MYB46(3) -----ABI4(2)                               <---------At4g35610 <---------ANAC55(2)       <---------AtMYB61 ---->MYB46(3)                       <------MYB83               <---------O2 --------->ANAC58 -->ARR14(2)                         <---------MYB46(3)         <---------ANAC58          <---------DEAR3(1) ---ARR14(2)                         --------->MYB52(2)         <---------TGA1a           --------->ALFIN1 ------ALFIN1<---------WOX13(1)      <------MYB46(1)---------->DOF2          --------->ANAC58 --------LBD16                      <---------TOE2(2)           <---------ANAC46     --------->MYB52(1) ------>MYB52(1)                   <---------MYB52(1)           <---------ANAC58 ----------->RAV1(1) -----MYB55(2)                   <---------HSFB2a(1)======================bZIP_DOF --------->MYB46(3)   caccggaatttggagattgacagaaaccacgaagaacgttggtttcatcagaggtaaagcctagagacgtgagcatcgcaggccaacaatcggtggtgat  9289200                                                                            --------->ATHB12                                                                         <---------AtLEC2                                                                        <-------TEIL                                 <------MYB83                        <------MYB83                                 <------MYB46(1)                     <---------MYB46(3)        <-----          ----------->HVH21     --------->MYB59                      <------MYB46(1)           <-----         <----------DOF2   ------>NtERF2                            <---------AtMYB61         <------        <---------ANAC58  --------->DEAR3(1)    <------ZmHOX2a(1)   <---------DEAR3(1)        <------        <---------ANAC58 <------NtERF2        <---------TOE2(3)     <---------TOE1(2)         -------      ------>NtERF2     ------>NtERF2 <-----------GT1              <---------MYB52(1)     --------->DAG2     <---------DEAR3(1)<---------DEAR3(1)  <---------MYB52(1)     <-------GAMYB          ---------->DOF2    --------->RAP2.6(3)--------->DEAR3(1) <-------GAMYB          <---------ANAC58  <---------At4g35610  ----------->HVH21    --------->ANAC46<---------At5g28300       <---------ANAC58  --------->At4g35610   gacctcgacggcttgacagcaatcgacgccgagtttggtttcaccgttgaggaagaagagaacgatttcgttggtgcatgatttgagctcataaagtgcg  9289300                                                               --------->LBD16                                                              <---------HSFB2a(2)     --------->ANAC58                                         <---------LBD16     --------->ANAC46                                        <---------LBD16     --------->ARR11(3)     --------->ANAC58                   <---------YAB1     <---------ARR14(2)    <---------ARR11(3)   <---------ALFIN1                 ------>NtERF2          --------->ARR14(2)--------->LBD16   --------->ZAT6             <---------ANAC58     <---------HSFB2a(1)      --------->HSFB2a(2) ----ANAC58             <---------MYB52(1)         --------->HSFB2a(1)      <---------ANAC46 ----ANAC58            <-------GAMYB<---------RAP2.6(3) <---------ANAC58    <---------HSFB2a(2) -TEIL              ------>ZmHOX2a(1)<---------MYB52(1) <---------ANAC58   <---------LBD16         <- ---ZAT18        ------>ZmHOX2a(1)---------->ID1   <---------HSFC1(2) <---------ARR11(3)          <-- -->ZAT18 <---------MYB52(1)  <---------ANAC58     --------->HSFC1(2) --------->ARR11(3)       <-----   ttccaacactccattagtcctcctccgttgagtcttgccgctatgtttgtggaatcttccgtctccgggagagttcttccggagatgttgagaacgagga  9289400                                                 <----------DOF2                                                 <---------------AGL15                                                 --------------->AGL15           <------NtERF2                     <----------DOF2       <---------MYB46(3)               <---------ICU4                                            <--      --------->ALFIN1                 --------->ICU4                                           -----      <---------AtMYB61    <---------ZAT6 <---------YAB1                                  <---------WOX13(1)  <---------------------WRI1      --------->ANAC58                                       <----------- --------ARR14(2)  <------ZmHOX2a(1)   <---------YAB1                                   --------->ATHB12 ----ZmHOX2a(1)   ----------->GT1 --------->ANAC46                                     <---------YAB1 -ZmHOX2a(1) ---------->DOF2      --------->ANAC58                                     --------->ICU4   ggatagcgatggtggcaaagaggaaacttgtgttagaagccattattctttctttttggggtttttgttttgttttgttttgttttgcgatgattgagtt  9289500                                                                                                    -                <------------CBF        --------->HSFC1(2)          --------->DAG2                 <-   <---------GLK1(1)             --------->ARR14(2)                ---------->DOF2                <-- -------ANAC55(2)   <---------TOE2(3)   <---------HSFC1(2)      --------->AHL20(2)               <--- ---->CCA1(2) <---------AHL20(2) <---------ARR14(2)       ----------->GT1                    -------- -CBF      <-----------TBP  <---------AtLEC2  <---------ZAT6    <---------AHL20(2)    <------ZmHOX2a(1)   acgagagttctgtttttatattgtggttttggatggattcgaagcttagtggtgatttaagagtaattaaaaagttggattagtgggaggaatgggaaag  9289600                                 <---------DOF5.7(2)                                 ---------->DOF2                               --------->DOF5.7(2)                              --------->TOE1(3)                              --------->TOE2(3)     --------->At5g28300     ----------->GT1    ----------->GT1     <---------YAB1                             <------------CBF --------->MYB52(1)   <---------ICU4                             --------->ARR11(3) ---------->HVH21     --------->YAB1                             --------->AHL20(1) --------WOX13(1)    --------->ICU4                     ------->TEIL ----------CBF       <---------ATHB12                <---------ANAC55(2)<---------ANAC58       <----- ---ZmHOX2a(1)  --------->ANAC55(2)                  --------->ANAC55(2)<---------ANAC58      ------>ZmHOX2a(1) -->DOF2        <---------ANAC55(2)           <---------ZAT14   <-----------TBP          <---------ZAT18   gattgacggtaaatagtcacttaatcatgaaacgttaaagcatttgactgtagaaacgtatttagtatatattggcatgttgaatcagtagcgctcctat  9289700                   <---------ZAT6                                                                 ---                 <---------ANAC46                                                    ----------->GT1             <---------TOE2(3)     --------->MYB46(3)                            <---------ARR14(2)            <---------DOF5.7(2)    ------------>CBF                           --------------->AGL15       ----------->GT1          --------->ZAT18                              <-----------------AGL3      <---------TOE2(3)     --------->DAG2                                   <-----------------AGL2      <---------TOE1(2) --------->HSFB2a(2)                     <----------DOF2  --------->ARR14(2)      <---------TOE2(2) <---------HSFB2a(2)             --------->ATHB12   <-----------GT1 <--------- -------CBF <-----------GT1---------->DOF2<----------DOF2       <---------DAG2<---------------AGL15   tggagacgaaggtttaacgtcgtgttacagaaagtgaaccaatgcttttgtaataaactcattgaactttatgctatatactgtatatggtttttactac  9289800                                                     <------ZmHOX2a(1)                                          --------->ARR11(3)                                          <---------AHL20(1)                                          --------->AHL20(2)                                          <---------AHL20(2)                                          <---------ARR11(3)    <---------AHL20(2)                                          --------->AHL20(1)    --------->AHL20(2)      <----------DOF2          <---------ANAC46    <---------TOE1(2) <---------------AtSPL8 ------>ATHB12            <-----------GT1--------->AHL20(2)    --------->AHL20(2) --GT1<---------DAG2  <----------DOF2--------->AHL20(2)     <----------DOF2   tcattgaactttatgctatgttttctttaaactccttgtataaatatatttcttaggaattacttttaaattatgtacaaagacatgtattacagaaaaa  9289900  Previous    Next  AGI:  At2g21740.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G21750.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN65099.1); contains InterPro domain Protein of unknown function DUF1278 (InterPro:IPR010701) Range:  from: 9289066    to: 9289443    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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