Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                 --------->At4g35610                               <---------At4g35610                           ------->MYC3                           <-------MYC4                           <-------PIF5                           ------->PIF5                           <-------MYC2                           <-------MYC3                           <-------PIF4                           ------->PIF4                           ------->MYC2                           ------->MYC4                          --------->TGA1a                          --------->ANAC58                          ==================bZIP_DOF                          <---------TGA1a                          --------->O2                          --------->ANAC58                          --------->ANAC55(2)                          <---------O2    <---------YAB1                          <---------ANAC55(2)                                                    ----                         ------------>OsbHLH66                                            <---------GLK1(2)                        <------------OsbHLH66                                             <---------ARR11(3)        ----------->GT1<---------ZAT2 <---------ZAT14                                     --------->ARR11(3) ---------->DOF2   --------->LBD16    --------->ZAT18                                    <---------RVE1(1) ------>GAMYB   <---------At5g28300   --------->ZAT14                   --------->ANAC55(2)     <---- ------->MYB46(3)<---------LBD16 <----------DOF2                        <---------ANAC55(2)  <-------   aaccaaagacttgtaattttccgcgagcacgtgagctttgtgctctgattagagaccagactgttccatgaattaagtaccataggtagagagattttcc  9266300                                                              --------->MYB46(3)                                                        --------->TGA2(2)                                                       <-----------TGA1                                                      --------->ANAC55(2)                                                      <---------bZIP60(1)                                                      --------->O2                                                      >>>>>>>>>>HY5           --------->TOE2(3)                          --------->bZIP60(1)           <---------MYB59                            <---------TGA2(1)          <---------ANAC55(2)                         <---------ANAC55(2)          ----------------->AG                        <<<<<<<<<<HY5          ===========================================================================================     <---------ICU4                                   <---------O2                      --------->AHL20(1)     <---------AHL20(2)                               --------->TGA2(1)          ----------->GT1    --------->AHL20(2)                               ----------->STF1           --------->DAG2 -->ZmHOX2a(1)                                       <-----------STF1          ---------->DOF2 -----MYB59--------->TOE1(3)                        <---------TGA2(2)     ---------->DOF2       ----- ----GT1<-----------GT1<----------DOF2             ----------->TGA1--------->ATHB12    --------->YAB1   taactatttattacctaaactgtttctttttgacaagaagcttaatctagagaatgacgtcataaccactaattgggaaagaaaagtaaacatattagtt  9266400                                                        --------->ANAC46                                                        --------->ANAC58                                                 ----------->GT1                                         --------->ARR14(2)                                         <---------ARR14(2)                                      <---------------AGL15               --------->ALFIN1       --------------->AGL15                                     -----            --------->DAG2           ----------------->AGL3                        ------>ZmHOX2a(2)       --------->HSFB2a(2)           ----------------->AG                        <---------AGP1------       <---------HSFB2a(2)           <-----------------AG             --------->ATHB12        -------  --------->TOE2(3)                  ----------------->AGL1         <---------WOX13(1)        <------ ======================================================MADS_MADS    <--------P   <---------ARR11(3) <---------------AGL15               ----------------->AGL2        <-------GAMYB --------->ARR11(3) ======================================================MADS_MADS  <---------MYB46(3)<----------DOF2 --------------->AGL15               <-----------------AGL3   --------->ATHB12   <---------ARR14(2) ================MADS_MADS           <-----------------AGL2  <---------ATHB12    --------->ARR14(2) ---->YAB1 ---------->DOF2       --------->At4g35610    --------->ANAC58        <---------CCA1(2)   ataacatttatagaaaagtgtgtctagggagcatcatatgccaaatatggatggaaaaacgcaatctttggttgattagtttggatctttgatactgatc  9266500                                                                                                    <                                                                                                    -                                                                                       ------->GAMYB-                                                                                     ----------->RAV1(2)                                                                                 <-----------GT1    -                                                                             <----------DOF2      <--                                                                          --------->ARR11(3)     ----                                                                          <---------ARR11(3)   ------                                                                         <---------CCA1(1)     ------                                                                         --------->CCA1(1)     ------      <---------AHL20(2)                                                 <---------GLK1(1)    -------      --------->AHL20(2)                                                 --------->GLK1(1)    ------>MYB83     --------->AHL20(2)                                                  --------->RVE1(1)    ------>MYB46(1) ->ZmHOX2a(2)                                                            <---------RVE1(1)    ------- --->GLK1(1)                                                            --------->ARR11(3)   <------- -->ARR11(3)          <----------DOF2   ---------->DOF2             ---------->DOF2--------->MYB46(3) ---ARR11(3)      <---------GLK1(2) <----------ID1       <----------DOF2<---------ARR11(3)  <--------   tccacaaaaaaatttgctcatattcttttctagctatagagacaaagacttaaaattctctttgttttggcaaagatatcttttaacaactggccctacc  9266600   --------->AtMYB61 ---------ALFIN1 -------->ANAC58 -------->ANAC58 -------->ANAC46 -------ALFIN1                         <---------At4g35610 ----->ANAC46                          --------->At4g35610 --->ANAC46                          --------->REM1(1) --->ANAC58                        ----------->RAV1(1)                    <----------DOF2      ------ --->ANAC58              --------->ANAC58                       <---------GLK1(2)           --------- ->P             ---------->DOF2  --------->ANAC46             *TSS   <----------DOF2       <-------- -->SPL7      ----------->TBP     ----------->HVH21         ------>ZmHOX2a(1)           <-----------GT1 --ALFIN1   <----------DOF2<------ZmHOX2a(1)               --------->TOE2(3)    <---------TOE1(2) -SPL7--------->ARR14(2) --------->ANAC58     ----------->RAV1(1)--------->GLK1(2)     <---------YAB1   ccacaccaaaacctctttataaagagcaaggactctgcgacatctgtgcaacatatcatttcctcagaatctctttcttttctaggtttattactacaca  9266700     --------->YAB1                                                                    ---------->DOF2    <---------ATHB12                                                            --------->At4g35610   ------>MYB83           <<<<<<<<<<<<<<<<<LFY <---------ARR11(3)               <---------At4g35610 -   ------>MYB46(1)   <-----------GT1 <-----------RAV1(2)                     ---------->DOF2        < --->ANAC46       --------->MYB52(2)<---------At4g35610                     <---------MYB52(1)     <- >ZAT14        --------->TOE2(3)    --------->At4g35610                    <-------GAMYB           <- -ZAT14        <----------DOF2    <---------bZIP60(1)                     <---------ZAT6     <-------   aaaccaaacatcatcaactttagttactaaacaatggcatcaggctcaatgtcttcttatggctctggctcatggactgttaagcagaacaaagcctttg  9266800                                                                  --------->At5g28300                                                                 <---------MYB46(3)                                                               <---------ANAC46                                                              <------MYB46(1)                                                              <---------MYB46(3)                                                              <------MYB83                                     <---------MYB52(1)      --------->MYB55(2)                                    <-------GAMYB            <---------AtMYB61                                   <---------MYB46(3)        <---------MYB46(3)                               --------->LBD16              <---------MYB52(1)                               ----------->HVH21          <---------MYB46(3)  --------->ZAT18              <---------SPL7             <-----------RAV1(1) -------->ZAT18              <---------LBD16            <---------At4g35610 ---------ZAT18       --------->ANAC58                 <---------AGP1 --------ANAC58       --------->ANAC58             <---------ANAC58 --------ANAC58       --------->ANAC46        <-----------RAV1(1)----------->GT1 ---DOF2        ----------->HVH21--------->SPL7    <---------ANAC58      ----------->RAV1(1)   agcgtgctctagcagtctatgaccaagacactccggaccgttggcacaatgttgctagagctgttggtggtaaaacaccagaagaagctaagagacagta  9266900                                        ------->PIF4                                        <-------MYC2                                        <-------MYC3                                        ------->MYC3                                        <-------PIF4                                        <-------PIF5                                        ------->MYC4                                        ------->MYC2                                        ------->PIF5                                        <-------MYC4                                       <---------ANAC55(2)                                       <---------ANAC46                                       <---------ANAC58                                       <------                                       <---------ANAC58                                       <------                                       --------->ANAC55(2)                                    <------                                       <---------bZIP60(2)                                    -------                                       --------->O2                                          <------NtERF2                      --------->ANAC58 <---------O2                                        <---------DEAR3(1)                      --------->ANAC58 --------->TGA1a                                    --------->ATERF1(1)                    =============================bZIP_DOF                                 <---------ZAT2                    ---------->DOF2    <---------TGA1a                            ------->GAMYB -----               <---------bZIP60(1)    ------------>OsbHLH66                    ----------->RAV1(1) --            ----------->HVH21      <-----------HVH21                           ====================RAV          <---------ANAC58  --------->HSFB2a(2)                        <------ZmHOX2a(1) <---------ATERF1(1)          <---------ANAC58  <---------HSFB2a(2)                       --------->ANAC46 <-----------RAV1(2)   tgaccttctagttcgtgacatcgaaagcatcgagaatggtcacgtgccattccctgactacaagactactacaggaaacagcaacagaggcaggctgcgt  9267000     ---------->DOF2                                    <---------ANAC55(2)   <------ZmHOX2a(1)                                    --------->ANAC46 ---ANAC58                                              --------->ANAC58 ---ANAC46                                              --------->ANAC55(2)          --------->ZAT18 ---ANAC58----------->GT1        --------->ANAC46       --------->ANAC58        ---------->DOF2 -->ANAC55(2)       ---------->ID1                      --------->ANAC55(1)    --------->YAB1  ------ ------>HVH21     <-----------RAV1(1)               --------->YAB1          --------->TOE2(3)  <----- ------->ICU4     <---------MYB46(3)         <---------YAB1       <----------DOF2    <---------ZAT18   gatgaggaaaagaggtatatttgttgcaatctaataagacacaatttatgctaataacaagtaatcaactttgtttatccataatagcccactataagat  9267100                                                                             <----------DOF2                                                                          <-----------GT1                                                                       ----------->GT1                                                <---------ANAC58     <---------ANAC58                                           --------->DAG2            <---------ANAC58            <---                                          ---------->DOF2         --------->DAG2       --------->GLK1(2)            <---------ARR11(3)   --------->ANAC58            <---------At4g35610      <---------GLK1(2) --->ARR11(3)                    --------->ANAC58            --------->At4g35610      --------->ARR14(2) ----ARR11(3)             --------------->AGL15 <---------ANAC58 ---------->DOF2    ----------->ARR10   acttctatagacaagttctattccaataccatgacaagaaaacataaagggcatgtctgtttcagcataaagcttgttactttacagagattctcttgac  9267200  Previous    Next  AGI:  At2g21650.1    Description:  MEE3 (maternal effect embryo arrest 3); DNA binding / transcription factor. similar to DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT4G39250.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN68999.1); contains InterPro domain Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609); contains InterPro domain SANT, DNA-binding; (InterPro:IPR001005); contains InterPro domain Homeodomain-like (InterPro:IPR009057) Range:  from: 9266663    to: 9267736    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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