Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                  --------->At5g28300                             --------->At4g35610                             <---------At4g35610                           <---------RAP2.3(2)                           <---------RAP2.6(2)                           <---------DEAR3(1)                               --------->YAB1                          <---------LBD16                                 --------->AHL20(1)                         <-----------RAV1(1)          ------->GAMYB      --------->YAB1  --------->AtMYB61<---------YAB1                  ----------->RAV1(1)   --------->AHL20(2) ------>MYB46(3) --------->YAB1----------->GT1    --------->MYB46(3)  --------->YAB1  --------->WOX13(1) >GT1           ----------->HVH21              --------->MYB46(3)    --------->AHL20(2) <---------ATHB12   accaccaaaatgagttctatgacaattgtgcggctgtaaaactagttcaacaacaacagaaaacaataccattaataatattaagcatcaatcaagcttc  9245200                                              <---------O2                                              --------->O2                                              --------->TGA1a                                            <---------ALFIN1                                      <-----------HVH21                                     <----------DOF2                        <---------CCA1(1)                                <-----------TGA1            <---------YAB1  <---------RVE1(1)     ---                                <-----------HVH21           ----------->HVH21              <---------                               --------->ANAC46            ------->MYC3    <---------ARR11(3)   <----                               --------->ANAC58            <-------MYC3    --------->ARR11(3)   -----                               --------->ANAC58 ----------->HVH21<------MYB46(1)          <----------                               --------->bZIP60(2)     <---------ZAT18    <<<<<<<<<RAP2.2 -----------            --------->AtLEC2  <-----------STF1<---------TGA1a--------->ATHB12            ------->TEIL  <----------DOF2  ----------->GT1   ===================bZIP_DOF <------MYB83        --------------->AtSPL8   actacttttgagtcatacaaatggttacaaaaaacgtcactttcacacacttgacattgcacatgataggtgttttagatatttgttcttgtacccttct  9245300      ----------->HVH21    ----------->RAV1(2)                                                              <---------At4g35610  -------->P                                                                 <-------MYC2 ------>ANAC46                                       <---------YAB1          ------->MYC2 ------AGL15                                     --------->KAN4(2)           ------->MYC3         --- -----HSFB2a(2)                             <------MYB83                     <-------MYC3 ------->TEIL ---->HSFB2a(2)                             <------MYB46(1)                 <---------ANAC58     <--- -------AGL1 <---------WRKY18(1)            ----------->GT1                 <---------ANAC58    ----- ------>AGL1----------->HVH21      ---------->DOF2<---------YAB1  --------->ANAC46   --------->At4g35610   aggcaaccctgaccctgaccgtagaaaattttcaaatgaaagcatttggtttattcttattgttttaaacacaagagaacgtgtgttagatgaatatggg  9245400                                                                             <---------At4g35610                                                                             <---------ANAC55(2)                                                                             <---------O2                                                                             --------->O2                                                                <---------ANAC46                                                             <---------MYB52(1)                                                          --------->SPL7     --------->At4g35610                   --------->REM1(2)                     <---------MYB52(1)  --------->ANAC55(2)           <-------MYC3                                 <---------SPL7       <---------TGA1a           ------->MYC3        ---------->DOF2          <---------RAP2.6(3)<-------------DYT1 <------   ----------->GT1--------->ALFIN1                     --------->DEAR3(1)<-----------HVH21    ------- -------->HVH21 <---------ANAC58                      --------------->AtSPL3 --------->TGA1a  ------- -------CDC5    <---------ANAC58                    --------->ARR14(2)  ===============MYC_MYB------- ---->At4g35610 <---------ANAC46                    <---------ARR14(2)  ------->GAMYB     <----------   ctgaggggttaaacgtgtccgtgtagcagtagagaaagagtatgggagaaaccagagccgtccgttttgtgtaacagtcacatgactcacatagtcacat  9245500                                                   <---------AHL20(2)                                        --------->ARR11(3)    <---------ARR11(3)          --------->AHL20(2)--------->AHL20(1)    --------->ARR11(3)         --------->AHL20(2) --------->AHL20(2)   --------->YAB1      ==============================================================================  <---------YAB1  <---------AHL20(2)    <---------ARR11(3)                               <------ZmHOX2a(2) ---bZIP60(1)  <---------AHL20(1)       --------->AHL20(1)       ---------->DOF2        <-----------HVH21 -->O2------>ZmHOX2a(2)--------------->AGL15      <---------AHL20(2)           <---------O2 -->bZIP60(1)  --------->AHL20(1)       <---------AHL20(1)    *TSS--------->DAG2 --------->ALFIN1 -->bZIP60(2)  <---------ARR11(3)    --------->AHL20(2)--------->YAB1          <---------ANAC46<----- -HVH21   ------------>CBF --------->AHL20(2)     <---------AHL20(1)      <----------DOF2============   cactatgatcttctcaatattttttctcttaaaataaaaaaaaatattcaaatttattcatcaacaaaaaagtatactttctcgtggggcgatcacagga  9245600                 --------->ZAT2                                                                   ---                 --------->At4g35610                                                           <-----                 <---------At4g35610                                                          -------               <------------MYB.PH3(1)  <---------ZAT14                                       <------         --------->DAG2              ------->TEIL                                           ---------        ---------->DOF2------>ZmHOX2a(1)--------->ZAT14                                  <---------ICU4   --------------->AGL15          --------->ANAC46                                       --------->YAB1   <---------------AGL15   <---------MYB52(1)                                           <---------YAB1  ----------------->AGL2  --------->LBD16                                            <---------YAB1--  ----------------->AGL3  <-----------HVH21                               ------->GAMYB --------->ICU4 ===================MADS_MADS     --------->ANAC58                       --------->MYB46(3) <-------- -ZmHOX2a(1) --------->MYB52(1)   --------->ANAC58                       <---------MYB52(2)<---------YAB1 =HOX2a_HOX2a<-----------GT1<---------WRKY12                         <------ZmHOX2a(2)--------->YAB1   caaaaccagaaaaagtaacagcttcctccgtcaactacgcacttcactgattcagtcttcgatttcaaacgatcaacaaacatttttatcataatcataa  9245700     --------->DAG2    ---------->DOF2 ------>YAB1 ----ICU4                                                           <---------ANAC58               <- -->ICU4                                                            <---------ANAC58               <- ---YAB1     <-----------GT1           --------->At4g35610          <-------GAMYB              <----- >YAB1  <---------ZAT6                 <---------At4g35610         <---------MYB46(3)    <---------AHL20(2) --------->GT1  <----------DOF2  <-----------GT1         --------->YAB1           --------->GLK1(2)-- -ICU4  ----------->GT1      --------->AHL20(2)         <---------YAB1<---------MYB46(3) --------->AHL20(2)   tcagaaaaaagtgttaaactttctcgtgagtttatatactctgctaacaatgctgtttataatggtttttggttgtttcttaagtttctgtttaaatttc  9245800               ------>ZmHOX2a(2)               <---------MYB46(3)      <---------CCA1(2)    <---------GLK1(2)                      <-----------GT1 --------GLK1(2)<-------GAMYB                              <---------TOE1(3)             <----------DOF2 --------ARR14(2)         <---------At4g35610              <---------TOE2(3)            <---------ANAC58 ----LBD16   --------->ARR14(2)      ----------->GT1  <----------DOF2                   <---------ANAC58 ------->ARR14(2)      <---------MYB52(1)         <---------CCA1(2)          --------->ATHB51<-------   ggattcttctatctggatcgttgttgttagcttctcaacatgtaaaaagtttctatcttttgaggttttttcattcccattatcgattttgcttctctgg  9245900                                                                                                    -                                                                                                  ---                                                                                                 ----                                                                                                 ----                                             --------->CCA1(2)                                  -----                                             --------->GLK1(1)    <---------YAB1               <-----                 --------->ZAT14            <---------ARR14(2)    ----------->GT1             -------                 --------->ZAT18         <---------TOE2(3)      <---------ICU4                <------                 <---------ZAT14      <----------DOF2        --------->YAB1                  --------                 <---------ZAT18     <---------ICU4 <----------DOF2                         ---------          --------->MYB46(3)  ----------->GT1<---------GLK1(1) --------->ICU4               <--------         >>>>>>>>>>>>>>>>>LFY--------->DAG2 --------->ARR14(2) <---------YAB1             --------->YAB1 --LBD16<-----------GT1     ---------->DOF2<------ZmHOX2a(1)<-------TEIL         <-------TEIL--------   gtttagtttttaaccaatgtgcactagaaaaaaagttaatctttaggatatgttcttttagtttcatgatgaaaaattgaagcttcatagtataatgatc  9246000    ----------->RAV1(2) --------->DOF2 --->ZmHOX2a(1) ----->TOE1(3) ----->TOE2(3) ->ZmHOX2a(2) ----YAB1 -->ARR11(3) ---ARR11(3) ->YAB1 >ICU4                    <---------TOE2(3)         --------->ICU4 -YAB1                 <---------YAB1      <-------TEIL     <----------DOF2      ---------->DOF2 >HAHB4      --------->YAB1        XXXXXXXXXXXXXXXXXXXX>MIR829.2    <---------ARR14(2)    <---------ANAC46   cttaaagcctggtactcataaaaccattaatgttcaaattcaagcttcatagtaattttgagctttagagtattttgaaacttcaaagagttttgtgttt  9246100  Previous    Next  AGI:  At2g21590.1    Description:  APL4 (large subunit of AGP 4); glucose-1-phosphate adenylyltransferase. Identical to Probable glucose-1-phosphate adenylyltransferase large subunit, chloroplast precursor [Arabidopsis Thaliana] (GB:Q9SIK1); similar to APL2 (large subunit of AGP 2) [Arabidopsis thaliana] (TAIR:AT1G27680.1); similar to APL3 (large subunit of AGP 3) [Arabidopsis thaliana] (TAIR:AT4G39210.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO47595.1); similar to ADPglucose pyrophosphorylase large subunit [Solanum habrochaites] (GB:ABC26923.1); similar to ADP-glucose pyrophosphorylase large subunit [Lycopersicon hirsutum] (GB:AAD56405.1); contains InterP Range:  from: 9245562    to: 9249520    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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