Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                 <------ZmHOX2a(1)                                                                        <------MYB46(1)                                                                        <---------MYB46(3)                                                                        <------MYB83                                <------MYB83                           --------->MYB46(2)                                <------MYB46(1)                        --------->MYB111(2)                                ----------->GT1                        --------->MYB55(2)                              <--------P                               <---------MYB46(3)                            <---------MYB46(3)                         --------->MYB111(1)                            <------MYB83                               --------->ALFIN1                            --------->MYB55(2)<---------KAN4(1)        <---------AtMYB61                     <---------ATHB12    --------->YAB1                <---------DEAR3(1)               --------->YAB1<-------GAMYB    --------->KAN4(1)       <--------P                  ---         ----------->GT1   <---------AtMYB61 ---------->TaMYB80       <---------MYB55(1)         ----  ----------->GT1  --------->WOX13(1)  --------->MYB52(1)          <---------TOE2(3)        >>>>>>>>>TBF1 ---->ANAC46  --------->ICU4<------MYB46(1)  <---------KAN4(2)     <---------TOE1(3)   <---------ATHB12   gaaacagaaaattgaaataatcaatcagggaggttggaaacaatcggaatattcaaacatttagcgattgaggttggtggaggaaacaaatgaagaagaa  9231200                                        ===================HOX2a_HOX2a                                        <------ZmHOX2a(2)                              <---------MYB59                              <---------------AGL15                              --------------->AGL15                             <-----------------AGL1                             ----------------->AGL3                             --------->ANAC55(2)                             ----------------->AGL1                             ========================================================================                             <-----------------AG                           <-----------GT1 ---------->DOF2                        <---------ICU4<------ZmHOX2a(1)                 <-------TEIL----------------->AG                --------->ARR11(3)  <---------TOE2(3)       ---------->DOF2     ----------->GT1              --------->HSFC1(2)------>MYB46(1)      ---------->DOF2            <---------ANAC46              <---------HSFC1(2)------>MYB83        <------ZmHOX2a(1)         ----------->GT1   <---- ------>DAG2  --------->HSFB2a(1)  --------->YAB1 <---------TOE1(3)           <---------ANAC46<------ ------>DOF2  <---------HSFB2a(1)  <---------ICU4 <---------TOE2(3)    ---------->DOF2<-----------GT1   aaagttatagagaagaaggttcttgatttttacctaataaggatcaaaagctaaggaaaggagaaagaagggagaaagagaggtgtatatacttctcttt  9231300                                   --------->ARR14(2)                                --------------->AGL15                               ----------------->AGL3                               ----------------->AGL2                            --------->At4g35610                           <---------ATERF1(1)                           <---------RAP2.3(1)                           <---------DEAR3(2)                          <---------RAP2.6(2)                          <---------DEAR3(1)                         --------->RAP2.6(3)                                                ---------                        <------ZmHOX2a(1)                                                   <--------                     <---------------AtSPL3        --------->TOE1(3)                        <--------              ----------------->AGL3               --------->TOE2(3)                        ---------        -------->P  ---------->DOF2<---------ARR14(2)                                      <------ZmHOX2a(1) ===============================MADS_MADS       --------->ARR14(2)                       <---------TOE2(3) -----TOE1(2) --------->LBD16 ------>NtERF2     <---------ARR14(2)             ---------->DOF2 ----DOF2     ==================================MADS_MADS            ---------->DOF2     <---------TOE1(3)   ggttctctcttacccccccaaaaaaaggacggctccagatttagaatgcgaaacctcagagaaacaaatctaaaagagagagaaagcttataaggatatt  9231400     ----------->GT1    <---------TOE2(3)                                                  --------->ATHB12           <--  ---------->DOF2                                                     <---------AHL20(2)          <-- >ARR11(3)                                                           <----------DOF2        <-------- -ARR11(3)    <----------DOF2                                     ----------->GT1       <---------WRKY18(1) -ARR14(2)   --------->TOE2(3)---------->DOF2                 ---------->DOF2          ----------->HVH21 >ARR14(2)<-----------GT1 --------->GLK1(2)             ----------------->AGL3    <---------TOE2(3)   gacaaaaaggttttacctttgttttgaaaatccaaagagagagagagttttagcacaatccattaaaagggttttattggaaaaaaggtttgacctttat  9231500                                                                               <-----------GT1                                                                         ------->MYC3                                                                         <-------MYC2                                                                         ------->MYC2                                                                         <-------MYC3                                                                        <---------ANAC58          <--                                                                        <---------ANAC46          <--                                                                        <---------ANAC58         <---                                                                        <------NtERF2            <---                                                                       ------>NtERF2             ----           <-----------HVH21                                          <---------ANAC46       <-------        <---------ANAC58                                              <---------ANAC58    <---------HSFB2a(2)      <-----------GT1                                                 <---------ANAC58    --------->HSFB2a(2)   ----------->GT1        ------------------------>ANAC81          --------->DAG2    <----------DOF2 -------AHL20(2)   <--------P            --------->ANAC58         ---------->DOF2   <---------MYB52(1) ---------GT1   --------->LBD16---------->DOF2--------->ICU4     ---------->DOF2   <---------RAP2.6(3) --DOF2 <---------ANAC58 ---------->DOF2 --------->ANAC58     >>>>>>>>>TBF1 *TSS ---------->ID1------   ttacattgtaacttgtccctggtaagagaaagagaaagagaagaagccatttttgtagggagaagaagaaaggcgcgtgttttgccgtttttctggtaag  9231600                                                                 <---------MYB59                                                                 --------------->AGL15                                                                 <---------------AGL15                                                                 ------------>CBF                                                                ----------------->AGL2      ---------                                                                --------->ANAC58            <-------- -------CCA1(1)             <---------YAB1                      ----------------->AGL3      --------- -------RVE1(1)           <-----------GT1                       --------->ANAC58            <-------- ------AHL20(1)          <---------YAB1                    --------------->AtSPL8        --------->AHL20(2) ------ARR11(3)        <---------ICU4                    --------->MYB52(1)              --------->YAB1 ----->ARR11(3)       <---------YAB1                    ------>ZmHOX2a(1)               <---------AHL20(2) -P                   --------->ICU4                <-----------GT1              --------->ANAC46  -- ----->ARR10         --------->TOE2(3)          <---------AHL20(2)             <---------ALFIN1 <----   atatttgtaaatggaagagaaaacattattactactgttttcaaatgtttttattttcctaatggtacccaatttagttttccaccctaaataatatttt  9231700     -------->HAHB4     --------->YAB1     <---------ICU4    --------->ICU4                     <---------AHL20(1)  <--------HAHB4                       --------->AHL20(1)  <--------ATHB1                       --------->AHL20(2)  --------->ATHB51                     <---------AHL20(2)  <---------ICU4                      <---------AHL20(2)  --------->YAB1                      --------->AHL20(2) --------->AHL20(2)               --------->AHL20(2) <---------ATHB12                 <---------AHL20(2) <---------ATHB51             --------->AHL20(2) --------->ICU4               <---------AHL20(2)                                               <----- >AHL20(2)                   --------->AHL20(2)                                            <--------- -AHL20(2)               <<<<<<<<<WRKY18                                        <---------ARR11(3) >AHL20(1)             <-----------HVH21                                        <---------GLK1(2) -AHL20(1)            ------->GAMYB<---------AHL20(2)                           --------->ARR11(3) ------->YAB1        <------------AtMYB77 --------->ICU4                      ----------->ARR10------ -------GT1     --------->YAB1--------->AHL20(1)                <---------MYB52(1) <-----------GT1   acaataattatgaactaatagtaactgtcaaaaaaattaaataaattatgaactactagtaattcggtttcttaaatgaatagattttcttctcttttta  9231800              <---------YAB1           <---------TOE2(3)                         --------->AHL20(2)                      --------          --------->YAB1   <-----------GT1          --------->AHL20(1)                    --------->CCA1(2)          <---------AHL20(2)                     --------->AHL20(2)                      --------->ARR11(3)          --------->AHL20(2)                    --------->AHL20(2)                       <---------ARR11(3)   <----------DOF2   ----------->GT1            <---------AHL20(2)                   ---------->DOF2 ----AHL20(2)<---------AHL20(1)                --------->AHL20(2)           <---------AHL20(1)     <- -DOF2  <---------YAB1     --------->ZAT6--------->ZAT6  <-----------GT1    --------->AHL20(1)<------ --->AHL20(2)--------->AHL20(1)    <-----------GT1  <---------AHL20(1)   --------->AHL20(2)  <-------   aatagcttttattaatatttttgaagttaatactatttcactaactctaattaatatatatactggacataaaaaaaaaatattagacaaagatatatat  9231900          --------->AHL20(2)    ----------->GT1        --------->At5g28300 ->AHL20(1)               ----------->GT1 --------YAB1            --------->ZAT6--------->YAB1                                        -------- ---AHL20(2)        --------->YAB1--------->AHL20(2)                  ---------->DOF2  --------->YAB1 --AHL20(1)<---------AHL20(2)     <---------AHL20(2)           <------ZmHOX2a(1)----------->GT1    --   tttgatatgttatataatacatttataacagtaattttaaatgataaacaaacaaacttatgtaaggacttaaaaagagagaatgtaaatgaaaattaga  9232000                                           --------->YAB1                                           -------->HAHB4                                           <---------ICU4                                           --------->ATHB12                                          <---------YAB1<---------At4g35610                                          <---------ATHB12                                          --------->ICU4--------->ZAT2                                         <---------TOE2(3)                    <---------YAB1     --------->AHL20(2)                                           <                  <---------ICU4       <---------AHL20(2)                                    <-------                <----------DOF2       --------->AHL20(2)<---------ZAT2                    <---------AHL20(2) ->YAB1   <---------AHL20(2)    ----------->GT1         --------->At4g35610               --------->AHL20(1) ------->YAB1<-----------GT1  ---------->DOF2    <------ZmHOX2a(1)    <----------DOF2     --------->AHL20(2)   atcatgctgtatttttttctttatgactctaaaaaagaaaattaatgattaggaagagagctggttttcttactttgaaattgttaactaaattttttat  9232100  Previous    Next  AGI:  At2g21540.1    Description:  SEC14 cytosolic factor, putative / phosphoglyceride transfer protein, putative. similar to transporter [Arabidopsis thaliana] (TAIR:AT4G34580.1); similar to SEC14 (secretion 14) [Arabidopsis thaliana] (TAIR:AT4G39180.1); similar to CM0216.420.nc [Lotus japonicus] (GB:BAF98224.1); contains InterPro domain Cellular retinaldehyde-binding/triple function, C-terminal (InterPro:IPR001251); contains InterPro domain Cellular retinaldehyde binding/alpha-tocopherol transport; (InterPro:IPR001071); contains InterPro domain Cellular retinaldehyde-binding/triple function, N-terminal (InterPro:IPR008273); contains InterPro domain Phosphatidylinositol trans Range:  from: 9227636    to: 9231576    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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