Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                       <---------ANAC46                                                     <---------ANAC58                                                     <---------ANAC58                               >                           <----------DOF2       <---------ANAC58                     --------->LBD16                         <---------HSFC1(2)      <---------ANAC58                    <-----------RAV1(2)                         --------->HSFC1(2)     --------->MYB52(2)                   <---------HSFB2a(2)                     --------->ANAC46          <-----------GT1                       <---------HSFC1(1)                 <----------DOF2            ----------->GT1                 --------->At4g35610  >>>>         ---------->DOF2------->TEIL    <------ZmHOX2a(1)       ------>ZmHOX2a(2)    --------->HSFB2a(2) ---At4g35610    <---------DAG2         ===============================HOX2a_HOX2a   --------->HSFC1(1)   catagctactaaaaaggccctttacgaagctttgatgagacaggaagagttacttgcttacattgatcgtcaagaagaagctcagttccagaagatgaag  9226000                                                                             --------->YAB1                                                                             --------->ANAC55(2)                              --------->ANAC58                   --------->ARR11(3)                              --------->ANAC58                   <-----------ARR10                       <---------ANAC58 --------->ANAC58         <---------ARR11(3)      >>>>>>>>>TBF1    <---------ANAC58 --------->ANAC58        <---------GLK1(2)   >>>>>>>>>TBF1  <----------DOF2  --------->ANAC58   <-----------RAV1(2)    <---------ANAC58 >>>>>>>>TBF1<---------ARR11(3)    --------->ANAC58 ----------->RAV1(1)      <---------ANAC58 >>>>>TBF1   --------->ARR11(3)  ---------->DOF2  --------->At4g35610     <----------DOF2   aagaagaagaagaaacatctcttttgcttctgaagcaaagccaagaaaaaccagcaccaggcatcaaaatctccctctttcgtaattcgctgttcttaag  9226100                                                                                          <----------DOF2                                                                                          <---------DAG2                                                                                       <---------ALFIN1                                                                                    --------->ANAC46    ----------->RAV1(1)                     ---------->DOF2                     <---------ICU4   <----------ID1                      <---------TOE2(3)    --------->ZAT18    --------->ICU4 --------->ANAC46           <---------CCA1(2)               <---------ZAT14    <---------YAB1     <--   tataaacaacaaaacaaaacaaaaactcttatatctgatttgatgttaaagctaatacagagagctctgtttccttctgtgattatgagccactttatat  9226200                                                                                         --------->GLK1(2)                                                                                        <---------GLK1(2)                                                                                        <---------ARR14(2)                                                                                        --------->ARR14(2)                           --------->GLK1(2)                                        <---------ICU4                  --------->YAB1                                                    --------->YAB1               --------->YAB1                                                    --------->WOX13(1)              <---------YAB1                                                   <---------YAB1            --------->YAB1 <---------ARR11(3)                                -------->ATHB1           <---------YAB1  --------->ARR11(3)                               --------->AHL20(2)          <---------AHL20(2)                                                <---------ATHB51          --------->AHL20(2)                                  ---------->DOF2<---------ICU4        <---------YAB1    --------->RVE1(1)              ----------->GT1    <---------AHL20(2)     <---------AHL20(2) --------->AHL20(2)               <----------ID1     --------->ICU4    <------ -------AHL20(2) <---------YAB1                   --------->AtLEC2     ----------->GT1 <------ZmHOX2a(1)   tatatgttttatttttataatcataaaaaaatctgtaactgtaaacttgttaatgcaaaacgaaaaaagagtatcgaaattattaatcaggattctgttt  9226300                                             <---------ARR14(2)                                             --------->ARR14(2)                                  <---------REM1(1)                              <---------ARR11(3)                              --------->ARR14(2)                              --------->ARR11(3)                              <---------ARR14(2)                              --------->AHL20(1)                         --------->ARR14(2)                              --------->ARR14(3)                         ------->TEIL                              <---------ARR14(3)        --------->ICU4   <---------ARR14(2)                              <---------AHL20(1)        <---------YAB1  <---------CCA1(2)                         <-------TEIL   ----------->RAV1(1)             <---------ARR14(1)      --------->ARR11(3)--------->CCA1(2)   --------->GLK1(1)         --------->ANAC55(2)     <------ZmHOX2a(1) --------->ARR14(2)   <---------GLK1(1)        <---------TOE2(3)             <-   <---------TOE2(3)   <---------ARR14(2)   <---------CCA1(2)<---------ARR11(3)---------->DOF2   <--- ---MYB52(1)     <-----------GT1<------------CBF      ----------->GT1<---------TOE1(3)        <------   ttttttaggattttgtttttatccagatacaagatattgtagccacatatcccatatagtgattatctcttaacgtatctcaaaagtttttgcatttttc  9226400                                                                                                    <                                                                                                    -                                                                                                   <-                                                                                                 XXXX                                                                                                 <---                                                                                                 ----                            <---------ATHB12                                                    <----    *TSS                  --------->WOX13(1)                             <---------ZAT18      ------- ----------GT1          <------ZmHOX2a(2)                                --------->ZAT14      <------ -------DOF2           <---------ARR11(3)                     <---------ARR11(3)     <---------TOE2(3) -----GT1              --------->ARR11(3)         ----------->GT1        --------->ZAT18   --------->YAB1   tttacttcatattttgtttttgtaagatcaatcagtttttatgaagagaaaatggagataacaatatcccaattgtgctctcgagttaagttttcatcat  9226500         <---------ICU4      <---------ICU4      --------->YAB1     <---------YAB1   --------->YAB1   <---------ICU4  <---------YAB1 ---------ICU4 -------->YAB1                                                                                    --- --------YAB1                                                                                   <---- XXXXXXXXXXXXXXXX>MIR414                                                    <---------ANAC58   <----- ------ICU4                                                <---------At4g35610                 ------ ----->YAB1    <----------DOF2                             --------->At4g35610             --------->At4g35610 -----YAB1     <---------DAG2                     --------->TOE2(3)         <---------ANAC58  ------- -->YAB1 --------->YAB1                           --------->TOE1(3)   <---------ZAT14      <---------At4g35610 ---ICU4<---------YAB1                            <---------MYB59     --------->ZAT14  <---------KAN4(2)   catcatcatcatcatcacttttctgtttctatggaaacagtaatagaaacaacctaaatggagctgtttcagtaaactgcttgagagagaatgagcagat  9226600                                                                ------>NtERF2                                                               <---------ALFIN1                                                              --------->DEAR4(2)                                                              <------NtERF2                                                            --------->ANAC58                                                            --------->ANAC46                                                           <-------MYC2                                                           ------->MYC3                                                           <-------MYC3                      --------                                                           ------->MYC2                      <-------            --------->ATHB12                              --------->ANAC58                   <-------           <-------TEIL                                   --------->ANAC58                  <--------        --------->At4g35610                  <---------MYB46(3)--------->DEAR3(1)          --------->MYB52(1) --------->YAB1                             --------->ALFIN1--------->ANAC58           <---------ALFIN1 -------->GT1                               <---------DEAR3(1)--------->ATERF1(1)     <---------ALFIN1 --ZmHOX2a(2)                               <---------AtMYB61------>NtERF2           --------->LBD16 ----ARR14(2)                              <---------MYB52(1)<---------ATERF1(1)    --------->ANAC46 --->ARR14(2)                          ------->TEIL       --------->ANAC46      --------->WOX13(1)<-- -->At4g35610    <---------ANAC46   --------->AtLEC2    <---------ALFIN1     --------->GLK1(2)-------   cagtaatattagcttcattgcgaagaaaccaagaagtcatgcaccggtggtgagaacaacacgcgcctccttggatgagaatcaatccccaacttccgga  9226700        <------NtERF2       <---------MYB46(3)       --------->ABI4(2)     <---------At4g35610 --------->MYB52(1)     <------MYB46(1) ->HSFB2a(2)            <------MYB83 --HSFB2a(2) --------->HSFB2a(2) --ANAC46<---------ANAC58  <---------WRKY12                              --------->TOE2(3) -LBD16------>NtERF2  <---------MYB52(1)                                 <----------DOF2 ----ZmHOX2a(1)       <--------P      <---------AHL20(2)       --------->WOX13(1)            -------- -->LBD16<---------ANAC58<-----------HVH21                   <---------YAB1     <----------DOF2    <-   ggagaacggtggcttctcaaaccagttggtcagaggctatttttttgtttctctaggtttaatatcaatgagcttctttaatctttttgagtcttgaaag  9226800                                                                             --------->GLK1(1)                                                                            --------->ARR14(2)                                                                            <---------ARR11(3)                                                                            --------->ARR11(3)                                                                            --------->ARR14(3)                                                                            <---------ARR14(3)                                                 ---------->DOF2            <---------ARR14(2)     <---------ANAC58                      ----------->GT1           <----------DOF2    --------->ANAC58     <---------AtLEC2                      <---------MYB46(3)   <---------At4g35610     --------->ANAC58     <---------ANAC58                <<<<<<<<<<<<<<<<<LFY       <---------ZAT2------>ZmHOX2a(2)     <---------ANAC46             --------->ANAC46             <---------ATERF1(1)------>ZmHOX2a(1) -->DOF2                          --------->ANAC58           <---------ANAC58<---------GLK1(1) ---------DOF2                    --------->ANAC58           <---------ANAC58<------ZmHOX2a(2)   tctttttgcctgaaaacttataggcgatggagacacaagacacattggttacaaagtggcaatgcctgctccttttgagatctcctctgtaagaaactat  9226900  Previous    Next  AGI:  At2g21520.1    Description:  transporter. similar to SEC14 cytosolic factor, putative / phosphoglyceride transfer protein, putative [Arabidopsis thaliana] (TAIR:AT4G39170.1); similar to SEC14 cytosolic factor, putative / phosphoglyceride transfer protein, putative [Arabidopsis thaliana] (TAIR:AT1G19650.1); similar to SEC14 cytosolic factor, putative / phosphatidylinositol transfer-like protein, putative [Arabidopsis thaliana] (TAIR:AT1G75370.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO47586.1); similar to CM0216.430.nc [Lotus japonicus] (GB:BAF98225.1); similar to phosphatidylinositol transfer-like protein III [Lotus japonicus] (GB:AAK63247.1); contain Range:  from: 9223002    to: 9226288    Orientation: Forward Links:  TAIR  MIPS    AGI:  At2g21530.1    Description:  forkhead-associated domain-containing protein / FHA domain-containing protein. similar to unnamed protein product [Vitis vinifera] (GB:CAO67358.1); contains InterPro domain Forkhead-associated (InterPro:IPR000253); contains InterPro domain SMAD/FHA (InterPro:IPR008984) Range:  from: 9226404    to: 9227670    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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