Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                  <----------DOF2             <---------ALFIN1          <-----------GT1       --------->ATHB51       <---------ICU4       -------->ATHB1      --------->ICU4      <---------ATHB12            --------->YAB1              --------->AHL20(2)      <---------ATHB51        --------->ZAT6                  <---------AHL20(1)    --------->WOX13(1)     <----------DOF2                    <---------AHL20(2)  --------->MYB46(3)   <---------ARR14(2)                     --------->AHL20(1)                    - --------->ANAC58      --------->ARR14(2)                  <---------AHL20(2)                      -- --------->ANAC46   <---------TOE2(3)                    <---------YAB1                         ----- --------->ANAC58   <---------TOE1(3)                <---------GLK1(2)        <----------DOF2   -----   tacaaccaattattcccactttgaggttcctttcactaatattcaactaatattagattattattttattagcttctatacttttaaaaagtttacaata  9169300                                                                                             --------                                                                                             <-------                                                                                             <-------                                                                                             <-------                                                                                             <-------                                                                                       <---------AHL20(2)                                                                                       --------->AHL20(2)                                        --------->AHL20(1)                           <----------DOF2             <---------ICU4             <---------AHL20(2)                           --------->TOE2(3)           <---------ARR11(3)          --------->ATHB51                           <---------ARR11(3)       --------->YAB1                  <---------AHL20(2)                         --------->ARR11(3) -------->DAG2          <---------MYB52(1)                                        --------->AHL20(1) -------->DOF2        ----------->GT1  --------->AHL20(2)                         <---------AHL20(1) ---->AHL20(2)     ------------>MYB.PH3(1)              --------->AHL20(2)       --------->RVE1(1) -- ---->YAB1 --------->GLK1(2)    <---------ANAC46        --------->ICU4           --------->CCA1(1) <-   aaaaagtgaacataatctttaaaacagttatttatcgtgaattattttgaaaatagcatttattaacacacattttctcttaaatatctttaatttcgta  9169400       --------->YAB1             <---------YAB1                       --------->TOE2(3) ->ANAC55(2)                      <---------ANAC55(2)                 <---------ICU4 --ANAC58                 ----------->GT1                             --------->YAB1----------------- --ANAC55(2)              --------->YAB1                             <---------ATHB12 --ANAC46    <-----------GT1   --------->ICU4         --------->AHL20(2)     <---------AHL20(2) --ANAC58    --------->YAB1  <---------ICU4           <---------AHL20(1)     --------->ATHB12 ------->AHL20(2)     <---------AHL20(2)              <---------AHL20(2)    <---------AHL20(2) --------AHL20(2)    --------->AHL20(2)               --------->AHL20(1)<---------MYB52(1)         --   tttatttcatcaaaataacaatatttaatcgtaattacgaaaattcaaaattggaataaattgttttgctaatcgttatttattgggccataaccagtag  9169500                                                                                                  <--                                                                                                  ---                                                          <------ZmHOX2a(1)                       ---                                                         <----------ID1                          ----                       --------->ARR14(2)        ----------->GT1                                 <---             >>>>>>>>>>AGL20                    <---------HSFB2a(2)                            ------             >>>>>>>>>>AGL22                    --------->HSFB2a(2)                           <------             >>>>>>>>>>AGL24                   <---------LBD16                          --------->ATHB12         ----------------->AGL3              <---------ARR14(2)                        <---------ATHB12         <-----------------AGL2              --------->ARR14(2)                        <---------YAB1 >AGL1   <-----------------AGL3              --------->GLK1(2)    --------->YAB1       --------->ICU4 -------->DOF2         <---------ARR14(2)   <---------CCA1(2)     ----------->GT1    --------->YAB1 <   agaaagcccgaactaaatatgggccgatacagagagaccctaactcaaatctggaaacaaggacaaaatggtaattcagacaactagtaatgatttatca  9169600        <---------YAB1                                                      --------->ANAC55(2)      --------->YAB1 <---------YAB1                                         <---------ANAC58     <-------TEIL  --------->YAB1                                           <---------O2 -------ICU4       <---------ICU4                                           <---------ANAC55(2) ------>ATHB51  --------->YAB1                                              <---------ANAC58 ------>ATHB12  <---------ICU4                                           --------->ARR14(2) ----->ICU4   ------->TEIL                                      --------->TOE2(3)  --------->At5g28300 ------YAB1<---------YAB1                                     <-------TEIL <-------TEIL             *TSS --->YAB1<---------ICU4                                      --------->CCA1(2)    ----------->GT1  <- ---YAB1--------->ICU4                            ----------->GT1 --------->AHL20(2)          ------- ---------WOX13(1)<---------YAB1       ----------->GT1  ---------->DOF2  <---------ARR14(2)----------   taattgattcatgatgaatcatcatcatatgtgtaatggtatggtcaaaactgtgttaaaaagatacattaaacaaatacgtggcagtaacaacaacaaa  9169700                                                                                     <------NtERF2                                                                       <------ZmHOX2a(2)            <                                                                      <---------ARR14(2)           --                                         ------>ZmHOX2a(2)            --------->ARR14(2)         <---                                         =====================HOX2a_HOX2a           --------->LBD16<-                                  --------->ATHB12             --------->ARR14(2)  <---------ANAC46<-                                  <---------ICU4               <---------ARR14(2) <---------LBD16----                                 <---------YAB1             <---------YAB1    <---------O2      <---- ----------GT1                   --------->ICU4        ========================HOX2a_HOX2a      ----- --->DOF2                   --------->At4g35610        =======================HOX2a_HOX2a       <---- ->RAV1(1)                  <---------At4g35610        <------ZmHOX2a(1)------>ZmHOX2a(2)   <--------   gttacctctggctcaaaattgtcccttcttagctcatcattgatccactgagagagaggattacgaatacgagatcggagacatggcggagagtcacggt  9169800           <---------ANAC58          <---------At4g35610          --------->At4g35610        <--------P       <-------GAMYB      --------->MYB55(2)      <---------MYB46(3)     <---------AtMYB61   <---------MYB46(3)     <---------At4g35610  <---------AtMYB61      <---------AGP1  --------->ALFIN1       ------->TEIL  <---------DEAR3(1)     --------->ARR14(2)                                               <---------At5g28300 ---------MYB46(3)       <---------ARR14(2)                                              <-----------GT1 ------->ALFIN1    --------->DEAR3(1)                                                 --------->At4g35610 ------MYB46(3)  --------->LBD16                                                      <---------At4g35610 --------DEAR3(1)------>NtERF2                                                   <---------At4g35610 --------AtMYB61 <------NtERF2          --------->ARR14(2)                       --------->At4g35610 ----->MYB55(2)  <---------At4g35610    <---------ARR14(2)                    <---------At4g35610 -----DEAR3(1) --------->SPL7--------->At4g35610                             <---------ARR14(2) ---->ALFIN1 <-----------HVH21     <-----------HVH21       --------->ANAC58  --------->ARR14(2) -----AtMYB61<---------SPL7 ----------->HVH21              --------->ANAC46  --------->GLK1(2)     <- -At5g28300<---------ANAC58------>ZmHOX2a(2)               --------->ANAC58 <---------GLK1(2) <------   ggtggtggtggttgctgtccgccgatggatctgatgcggtcagaaccgatgcaactcgttcaagtcattgttcccatggaatctgctcatcttaccgtct  9169900               <-----------HVH21          <------ZmHOX2a(2)                     --------->ZAT14         --------->ARR11(3)                     <---------ZAT14         <---------ARR14(2)          ------->TEIL                                     <---------YAB1      <------NtERF2                  <-------TEIL<-----------GT1             <---------ZAT6    <---------DEAR3(1)           <---------------AtSPL8                     >>>>>>>>>TAC1        <--- --------CCA1(2)                 <---------------AtSPL3         ------>ZmHOX2a(2)     <---------AHL20(2) ---CCA1(2)------>ZmHOX2a(2)     --------->ARR11(3)           <---------ARR11(3)  <---------TOE2(3)   cttatctcggcgatctcggtctcgtccagttcaaagatgtacgtatagagtttactctctccatgatcgtctctctcgagtgttaagttttattgtattg  9170000                 <----------DOF2              <---------ARR11(3)              --------->ARR11(3)             --------->GLK1(1)             <---------GLK1(1)             <---------RVE1(1)            --------->ARR11(3)            --------->ARR14(2)            <---------ARR14(2)                                           <-------TEIL            <---------ARR11(3)                                 <---------YAB1    <---------At4g35610 ------YAB1<------ZmHOX2a(1)                            --------->RAP2.6(3)      --------->At4g35610   cgattgcattagaggatatctttagtgaatgttgaactagtttagttgttcttcttatatcggctatttttgatgttcatttcagcttaattctgagaag  9170100                                                                 <---------YAB1                                                              <---------YAB1                                                            <---------ICU4                              --------->MYB52(2)           --------->ICU4                         <---------TOE1(3)                 <---------YAB1                     <---------At4g35610                 <---------ICU4                           <--                     --------->At4g35610                 -------->HAHB4                           ---                  <---------At4g35610                    --------->YAB1                     <--------                 <-----------RAV1(1)                    <---------ATHB12           <---------ANAC58                 ===================RAV                 --------->ICU4             <---------ANAC46           <------ZmHOX2a(1)<--------P                  <---------YAB1             <---------ANAC58       ---------->DOF2  <-----------RAV1(2)      --------->At4g35610    <-----------GT1     ---------   agcccatttcaaaggacttatgctgctcaggttagttcaagtttatgcgaatgctgaaatgattattatgctatttacacctattgtgtgtgtaatggtg  9170200  Previous    Next  AGI:  At2g21410.1    Description:  VHA-A2 (VACUOLAR PROTON ATPASE A2); ATPase. similar to VHA-A1 (VACUOLAR PROTON ATPASE A 1), ATPase [Arabidopsis thaliana] (TAIR:AT2G28520.1); similar to VHA-A3 (VACUOLAR PROTON ATPASE A3), ATPase [Arabidopsis thaliana] (TAIR:AT4G39080.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO47222.1); similar to putative vacuolar ATPase subunit 100 kDa subunit [Mesembryanthemum crystallinum] (GB:CAD27718.1); similar to vacuolar proton-ATPase subunit-like protein [Lotus japonicus] (GB:CAE45587.1); contains InterPro domain ATPase, V0/A0 complex, 116-kDa subunit; (InterPro:IPR002490) Range:  from: 9169700    to: 9175532    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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