Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                     <-                                                          <------NtERF2                            <-                                                      <-----------HVH21                            <-                                                    ------>ZmHOX2a(1)<------MYB46(1)             <---                                                 ---------->ID1      <------MYB83                ----                                        <---------ANAC58 ------>NtERF2                       <-------        <---------YAB1                  <---------ANAC46 <---------DEAR3(2)            --------->DAG2   ---------->DOF2    <-----------RAV1(1) <---------MYB52(1)<----------DOF2           ---------->DOF2 <---------AHL20(2)--------->MYB52(1)   <---------ANAC58<---------DEAR3(1)      <------ZmHOX2a(1)<---   tatataaaagatgatacaaacaaactgttgctactcttcattccgttttttgtcctcgtcggctttcaatttggtgggactaggacgataaagtatcacg  9143600   --------->LBD16  --------->ANAC46  --------->ANAC58  --------->ANAC58 --------->At4g35610 <------NtERF2 --------->LBD16 <---------LBD16 --------WRKY12 --------WRKY38(1) --------DEAR3(1) --------HVH21                                                              <---------KAN4(2) ----->ARR14(2)                        ------>ZmHOX2a(1)    ------>ZmHOX2a(1)     <---------ANAC46  - ----GT1 <-----------GT1          <---------ANAC58   <---------ICU4     --------->ANAC46           <- ------SPL7  ----------->HVH21    <---------ANAC58   --------->YAB1    --------->LBD16      <--------   gtccgcgcaatttgcccgactgatactgaaccagtggcttcctccaaacgtagaatcatgtcctctagctctccagggcatgttctgtgtattttcacct  9143700              --------->ICU4      --------->ARR14(2)                                                -            --------->YAB1       --------->ATHB12                                        --------->AtMYB61           =============================HOX2a_HOX2a       --------->YAB1                 <---------ALFIN1  <---------WOX13(1)             <------ZmHOX2a(1)      <---------WOX13(1)           <---------MYB55(2) -------->ATHB12               <---------TOE1(2)      --------->ATHB12               --------->MYB46(3) --------YAB1 <---------YAB1  <---------LBD16   <-------TEIL       <---------At4g35610------->GAMYB - ---GT1    <------ZmHOX2a(2)  <-----------RAV1(2)    <---------AHL20(2)            <-----------GT1  <   attgattgaatcgatcaagattaagtcaagtctcaggattggacttcaaatacatttcattgatcagacagcaactattccaatgtaaccaccattccac  9143800                                                                                                    -          --------->ARR11(3)                                                                        -          <---------ARR11(1)                                                                       <-          <---------ARR14(2)                                                                      <--          <---------ARR11(3)                <----------DOF2                                       ---          --------->ARR14(2)               --------------->AGL15                                 ----         <---------CCA1(2)                 --------->TOE2(3)                                     <--- -------->TOE2(3)                 ----------->GT1                                             <------ -------->TOE1(3)               ---------->DOF2   --------->ARR11(3)            <------ZmHOX2a(1)---- ---------MYB59        ----------->GT1  <-----------GT1                    --------->ANAC46   -------   tacctaaacccaaatcttggagagattgtaacaataaagtttatacctttaagagctcgttcttctccagcgtctctacgaaggacaagacgactgaatc  9143900         <---------ANAC58         <---------ANAC58  --------->ANAC58  --------->ANAC58 --------->DOF2 -------->SPL7 --------MYB52(1) ---------HVH21                         --------->ANAC58           <----------DOF2 ------>LBD16                           --------->ANAC58    --------->ANAC58 ----->ANAC55(2)           --------->GLK1(1)                --------->ANAC58 ------ANAC55(2)           <---------GLK1(1)         <---------ANAC58 ---ARR14(2)            <---------TOE2(3)     <---------ATHB12  --------->ANAC58 ----->ANAC46<---------ANAC58       <-----------HVH21<---------ANAC58         <----------DOF2 -->ARR14(2) <---------ANAC58    <---------MYB52(1) <-------TEIL--------->ANAC58              -------   cgtaacgccagacttgcctacaagttgagatttcagtttgtcacccaaatgatgtgcgtaagaagcaagctttctcttctctttcgcagacaactccaaa  9144000                                                                                                  <--                                                                                                  ---                                         <---------ETT(1)         <---------MYB52(1)             <---  <---------ZAT2                         ----------->HVH21       --------->TOE2(3)           <------ZmHOX2a(1) --->DOF2                     --------------------->WRI1     --------->YAB1                <---------TOE2(3)   gccgagcttcttcggttttctctcatggacaccattgtaagttccgacccatcttcttggccatcatcgttaatctcgttaagagaggctactaaggaca  9144100                                                                               --------->ALFIN1                                                                              ------->PIF5                                                                              <-------PIF5                                                                             <---------ANAC58                                                                             <---------ANAC58                                                    <------ZmHOX2a(1)        <---------ANAC46       -                                                <---------TOE2(1)            <---------bZIP60(2)    <                                                <---------TOE1(1)          <------ZmHOX2a(1)       --                            ------->GAMYB  <---------TOE2(3)    <---------At4g35610               <-- -----MYC3               ----------->RAV1(1)   <-------TEIL     --------->At4g35610      ---------->DOF2 ---->MYC3          <-------TEIL           --------->MYB59     --------->GLK1(2)      ----------->GT1 ------O2       <---------YAB1        <------ZmHOX2a(1)  <------ZmHOX2a(1) ==========================   cgttgtcttcgtcttgttctgattcatcaacagaagagaaggatttaggtacgaggagaggagagaagctgatataaggacgtggaagaggtaaagaaga  9144200              --------->ATHB12             <---------YAB1           <---------ICU4          --------->ICU4      --------->ANAC46      --------->ANAC58      --------->ANAC58     <---------LBD16  <------ZmHOX2a(2)  --------->CCA1(2)                      --------->ANAC58 --------->AGP1                          --------->ANAC58 --------->ARR11(3)          <---------MYB59 <---------ARR11(3)         ----------------->AGL1 --------->ARR14(2)      <---------RAP2.6(2)                                   <------MYB46(1) <---------ARR14(2)     --------->RAP2.6(3)   --------->DAG2              <---------ARR11(3) -------->GLK1(1)       <---------At5g28300  ---------->DOF2           <------ZmHOX2a(1)   --------->ETT(1) ---------GLK1(1)      <-----------GT1   --------->ANAC55(1)        <-----------RAV1(2)  <-----------HVH21 --------->ARR10     <----------DOF2     <---------ANAC55(2)--------->DEAR3(2) <---------MYB46(3)   - ----ZmHOX2a(1)      <---------GLK1(1)   --------->ANAC46   --------->MYB46(3) <------MYB83<---------ANAC46 ========HOX2a_HOX2a--------->ARR14(2)  <---------LBD16  <------ZmHOX2a(1)--------->ARR11(3) <------NtERF2   ggagatccacgcatgatgactggatttacggcctaatagagacacggaaaagggtctgaggaacagacagacaggagatgttggtttgcgatgtcggaga  9144300                                                                                           <---------YAB1                                                                                          <---------ARR11(3)                                                                                          --------->ARR11(3)                                                                                       --------->YAB1                  ---------->DOF2       <------NtERF2  ------>ZmHOX2a(1)              <---------YAB1<       <------ZmHOX2a(2)              --------->RAP2.6(2)                           --------->YAB1  -    <---------MYB46(3)      --------->ARR11(3)<---------LBD16--------->ZAT14   ----------->GT1    --- -------->ALFIN1 <---------WRKY45    --------->ATERF1(1)  --------->At4g35610 <---------TOE2(3) -----   agatggtggatcaagttagtcaaagtcgatgattttgcagtcgccatctccggtctcctcttctgaactctgagatttatgaggttttataatatcattt  9144400                                                    <---------YAB1                                                   xxxxxxxxxxxxxxxx>smallRNA(s)                                                   xxxxxxxxxxxxxxxx>smallRNA(se3)                                                  xxxxxxxxxxxxxxxx>smallRNA(fl3)                                                  xxxxxxxxxxxxxxxx>smallRNA(si3)                                                 xxxxxxxxxxxxxxxxxx>smallRNA(si3)                                                 xxxxxxxxxxxxxxxxx>smallRNA(se3)                                                 xxxxxxxxxxxxxxxxx>smallRNA(si3)                                                xxxxxxxxxxxxxxxx>smallRNA(fl3)                                               xxxxxxxxxxxxxxxxxxx>smallRNA(l2)                                               <---------ZAT6                                               xxxxxxxxxxxxxxxxxx>smallRNA(se3)                                               xxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                                           xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                                           xxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                           xxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                                        <------MYB83----------->ARR10                                        <------MYB46(1)                                        xxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                        xxxxxxxxxxxxxxxxx>smallRNA(si3)                                       xxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                                       xxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                       xxxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                       xxxxxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                                       <---------AtMYB61       xxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                       --------->MYB59xxxxxxxxxxxxxxxx>smallRNA(i)                                      xxxxxxxxxxxxxxxx>smallRNA(s)                                     xxxxxxxxxxxxxxxx>smallRNA(i)                                     xxxxxxxxxxxxxxxxxx>smallRNA(fl3)                                     xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                     xxxxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                                     xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                     xxxxxxxxxxxxxxxx>smallRNA(se3)                                    <---------MYB46(3)<---------GLK1(2)                                    xxxxxxxxxxxxxxx>smallRNA(si3)                                    xxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                    xxxxxxxxxxxxxxxxx>smallRNA(si3)                                    xxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                    xxxxxxxxxxxxxxxxxx>smallRNA(si3)                                    xxxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                    xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                    xxxxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                    xxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                    xxxxxxxxxxxxxxxx>smallRNA(si3)                                    xxxxxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                    xxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                    xxxxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                    xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                                    xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                                    xxxxxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(l2)                                    xxxxxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(s2)                                    xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                    xxxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                                    xxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                    xxxxxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                    xxxxxxxxxxxxxxxx>smallRNA(le3)                                    xxxxxxxxxxxxxxx>smallRNA(le3)                                    xxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                                    xxxxxxxxxxxxxxxxxx>smallRNA(fl3)                                    xxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                                    xxxxxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                                    *TSSxxxxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                    xxxxxxxxxxxxxxxx>smallRNA(fl3)                                    xxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                                    xxxxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                                    xxxxxxxxxxxxxxxxx>smallRNA(fl3)                                    xxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                                    xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3) xxxxxxxxxxxxxxxxx>smallRNA(le3)                                    xxxxxxxxxxxxxxx>smallRNA(fl3)        xxxxxxxxxxxxxxx>smallRNA(le3)                                    xxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)   xxxxxxxxxxxxxxxx>smallRNA(si3)                                    xxxxxxxxxxxxxxxxx>smallRNA(le3)     xxxxxxxxxxxxxxx>smallRNA(se3)                                    xxxxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                                    xxxxxxxxxxxxxxx>smallRNA(se3)       xxxxxxxxxxxxxxxx>smallRNA(s)                                    xxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                                    xxxxxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                                    xxxxxxxxxxxxxxxx>smallRNA(se3)      xxxxxxxxxxxxxxx>smallRNA(le3)                                    xxxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)xxxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                                    xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)xxxxxxxxxxxxxxx>smallRNA(si3)                                    xxxxxxxxxxxxxxxxxxx>smallRNA(se3)   xxxxxxxxxxxxxxxx>smallRNA(si3)                                    xxxxxxxxxxxxxxxxxx>smallRNA(se3)   xxxxxxxxxxxxxxxx>smallRNA(s)                                    xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)xxxxxxxxxxxxxxxx>smallRNA(se3)                                    xxxxxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)  xxxxxxxxxxxxxxxxxx>smallRNA(se3)                                    xxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)xxxxxxxxxxxxxxxx>smallRNA(le3)                                    xxxxxxxxxxxxxxxxx>smallRNA(se3)   <---------ANAC58       --------                                    xxxxxxxxxxxxxxxx>smallRNA(i)<---------ANAC46            <--------                                    xxxxxxxxxxxxxxxxxxxx>smallRNA(se3)<---------ANAC58      ---------         <----------DOF2            xxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)xxxxxxxxxxxxxxxxx>smallRNA(si3)      --------->GLK1(2)        --------->DAG2  xxxxxxxxxxxxxxxxxxx>smallRNA(se3)  xxxxxxxxxxxxxxxxxx>smallRNA(se3)     --------->YAB1          ---------->DOF2 xxxxxxxxxxxxxxxxxxxxx>smallRNA(l2)   xxxxxxxxxxxxxxxx>smallRNA(fl3)  --------->YAB1<---------ANAC58   --------->ALFIN1xxxxxxxxxxxxxxxx>smallRNA(fl3)--------->LBD16 --------->AHL20(2)        --------->YAB1 xxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)--------->PCF5 <-------- <---------AHL20(2)       <---------YAB1xxxxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)--------->LBD16   <-- ---------ATHB12<---------AtLEC2   xxxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3) xxxxxxxxxxxxxxx>smallRNA(le3) -------->AHL20(2)     --------->ICU4xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3) xxxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3) ------>WOX13(1)<---------ANAC58   xxxxxxxxxxxxxxxxxx>smallRNA(se3) --------->ALFIN1    <---------GLK1(2) ------->CBF    <---------ANAC46   xxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)xxxxxxxxxxxxxxxx>smallRNA(le3)   caattaataatcttttttgcttgaaattatcaaaagggtgtttggtctagtggtatgattctcgcttcgggtgcgagaggtcccgagttcgattctcgga  9144500  Previous    Next  AGI:  At2g21340.1    Description:  enhanced disease susceptibility protein, putative / salicylic acid induction deficient protein, putative. similar to EDS5 (ENHANCED DISEASE SUSCEPTIBILITY 5), antiporter/ transporter [Arabidopsis thaliana] (TAIR:AT4G39030.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO47230.1); contains InterPro domain Multi antimicrobial extrusion protein MatE; (InterPro:IPR002528) Range:  from: 9139636    to: 9143539    Orientation: Forward Links:  TAIR  MIPS    AGI:  At2g21350.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G39040.1); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G39040.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO47229.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN73653.1); contains InterPro domain CRS1/YhbY (InterPro:IPR001890) Range:  from: 9143251    to: 9144035    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At2g21360.1    Description:  pre-tRNA. tRNA-Pro (anticodon: CGG) Range:  from: 9144436    to: 9144507    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version