Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                <xxxxxxxxxxxxxxxxsmallRNA(i)                                                    xxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                                                   --------->LBD16                                                  <---------ANAC46                                                 <---------LBD16                                             --------->At4g35610             --------->O2                    xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)             <---------O2 ---------->DOF2 xxxxxxxxxxxxxxxx>smallRNA(i)             --------->TGA1a              xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)             <---------TGA1a <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)     <-------TEIL     <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3) ---------DOF2       ------>ZmHOX2a(2)  <---------ZAT6      ----------->GT1 <----------DOF2 -----DOF2   ========================bZIP_DOF<---------At4g35610---------->DOF2          --------->TOE2(3) ---GT1   --------->TOE1(2) <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)    --------->CCA1(2)<-----------GT1   tctttgtctaaacacacgagtgatcgaacaaagagagatttagtgagagcttccgcataaaacagttaaagattcaagctttttttttttacatcaacat  9132900                                                                          <---------ZAT2                                                                          --------->At4g35610                                                                   <---------ARR11(3)  <-------TEIL                                                                   --------->ARR11(3)  --------->ZAT14                                                                   <---------GLK1(2)   <---------ZAT18                                                                 ----------->ARR10     --------->ZAT18                                                                 <---------YAB1        <---------ZAT14      <---------AHL20(2)         <---------AHL20(2)              <---------TOE1(3) <---------------AtSPL8     --------->YAB1            <---------YAB1                    <---------TOE2(3)---------->DOF2     --------->AHL20(2)       --------->AHL20(2)         --------->GLK1(2)--------->ZAT2  --------->ANAC46  --------->YAB1        <-----------GT1                 <---------GLK1(2) <---------At4g35610   ttactaataaaaatgtatagttgaattttcaatattatatgctccaattgatacttcagaatgtgttaagattttcagcttagcaaaagtacacaaaaac  9133000                                                                                           <---------                                                                                        --------->YAB1                                                                                       --------->AHL20(2)                                                                                       <---------AHL20(2)                                                                                      --------->ICU4                                                                                      <---------YAB1                                                                                    <---------ICU4                                                                                   --------->AHL20(2)                                  --------->AHL20(2)                               <---------ATHB51                            --------->YAB1    <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)--------->ICU4                      <-----------GT1    --------->AHL20(2)                        <---------AHL20(2)                   <---------ICU4 <---------AHL20(2)                       <----------DOF2 --------->YAB1                  --------->AHL20(1)     <---------AHL20(2)               ===========================                  --------->AHL20(2)  -------->HAHB4                      --------------->AGL15                  <---------AHL20(2) <---------YAB1               --------->ZAT14 <---------AHL20(1)                 --------->AHL20(2) <---------TOE2(3)             <---------ZAT14--------->YAB1        ----------->GT1 <---------YAB1--------->YAB1          --------->ZAT6   --------->AHL20(2)  <-   tatagtagaatagttcaaaaaaaattacaataacaattaatgataaattttgagaccatttttgacactgcaatttccttttaaaataattaataacaaa  9133100                            ------>MYB46(1)                            -------->P                            ------>MYB83                           --------->MYB55(1)                          <---------MYB46(2)                --------->ARR14(2)             <---------ANAC46   --------->AtLEC2     --------->YAB1       <---------MYB111(2)    <---------ATHB12      <---------MYB55(2)                                                      ---    <<<<<<<<<ARR2         --------->MYB46(3)                           ----------->GT1            <--  --------->WOX13(1) --------->ANAC46      --------->ATHB51      --------------->AGL15            <-- --GT1     ----------->GT1<---------MYB111(1)                    ------>ZmHOX2a(1)                --- ================================================================================MADS_MADS  --------- ----------GT1  <---------ARR14(2)         <---------ICU4       --------->TOE2(3)        ----------->GT1   ttaacaatcaaaatggtgtatacactcacctaccattcaaacccataatttcatatagaacatattcctaaaaatgtgaaaaaattttaaaagattaaaa  9133200       ---------->DOF2 ------>ARR11(3)                                    <---------AHL20(2)             --------->DAG2 -------ARR11(3)                          ------>ZmHOX2a(1)                  --------->AHL20(2) -------AHL20(1)                     --------->RVE1(1)           --------->YAB1   ---------->DOF2 ------>AHL20(1)  ------------------------>ANAC81   --------->AHL20(2)    --------->GLK1(1) >AHL20(2) ----------->GT1         --------->AHL20(2)   <---------ICU4----------->GT1        --------   aatatttgacaaagagtcaaatacaaaaaaaaaaaaaaaaaatcctatctatgtttaattttggccatcagaagggaaatcaaataaaggggagatagag  9133300                                                                                                 <<<<                                                                                              <<<<<<<                                                                                           <<<<<<<<<TBF1                                                                                        <<<<<<<<<TBF1                                                                                     <<<<<<<<<TBF1<xx                                                                       <------------------------ANAC81                                                                       <----------DOF2<xxxxxxxxxxxxxx                                                              <---------At4g35610  <xxxxxxxxxxxxxxxxx                         <---------ANAC46                  <---------At4g35610  <xxxxxxxxxxxxxxxxxxxx                        <---------At4g35610                --------->At4g35610 <<<<<<<<<TBF1<xxxxxxxx             --------->ANAC58                              --------->ZAT2   <<<<<<<<<TBF1<xxxxxxxxxxx             --------->ANAC58                              <---------ZAT2 <------------------------ANAC81  <---------ARR14(2)    <------NtERF2        --------->WOX13(1)      <------------------------ANAC81<  <---------ZAT14   --------->ANAC46        *TSS          <-----------RAV1(1)<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3) -->DOF2     --------->ANAC46       <-------TEIL--------->YAB1--------->At4g35610 <<<<<<<<<TBF1<xxxxx   cgagtatacatatacaagctactcgcagcgtctgcaaattcatctatccatcatatttctctgctgctctctgctttcttcttcttcttcttcttcttct  9133400      <<<<<<<<<TBF1   <<<<<<<<<TBF1 <<<<<TBF1  <<<<<<<<<TBF1 <<TBF1  <<<<<<<<<TBF1 xxxxxxxxxxxxxxxxxxxxxsmallRNA(se3) xxxxxxxxxsmallRNA(se3) xxxxxxsmallRNA(se3)                    ------>ZmHOX2a(1) xxxsmallRNA(se3)                 <---------ARR11(3) xxxxxxxxxxxxxxxsmallRNA(se3)     --------->ARR11(3) <----------DOF2 xxxxxxxxxxxxsmallRNA(se3)       --------->RVE1(1)   <---------DAG2           ------>ZmHOX2a(1) <<<<<<<<TBF1    --------------------->WRI1 ------>ZmHOX2a(1)                --------->TOE2(3) xxxxxxxxxxxxxxxxxxsmallRNA(se3) --------->CCA1(1)<-----------GT1 <-----------GT1    <----------DOF2   tcttcttcttcttcttcttcttagtttgattcaaaaaatctccttcctcttcttactttatctcgtattatccattaatcctaaaccctttagtctctcc  9133500                   --------->GLK1(2)                  <---------GLK1(2)               --------->YAB1                                                                     <--            --------->WOX13(1)                                                                    <--           --------->MYB46(3)                                                            <---------ANAC46        --------->REM1(1)                                                            --------->ARR14(2)      <----------DOF2                                                          --------->TOE2(2)  <--    --------->At4g35610                          ---------->DOF2     ----------->GT1 <---------ARR14(2)    <---------At4g35610                      <----------DOF2  <---------ATHB12 --------->TOE1(2)<----   atcttccgcttcaacaatcagaatttgggtttggcgaaagatgctaactttgaaagtgagactaatcgtttgagtaaaaaacatgcgaattttgtgtgat  9133600                                          --------->HSFB2a(1)                                          <---------HSFB2a(1)                                          <---------HSFC1(2)                                          --------->At4g35610                                          <---------ZAT2                                          --------->ZAT2                                          --------->HSFC1(2)                                          <---------At4g35610                                     <------NtERF2                                    ------>NtERF2                                   --------->RAP2.3(3)                                   ----------->HVH21                                   --------->DEAR3(1)                                   --------->DREB2C(2)               ------>NtERF2       --------->At1g77200              --------->DEAR3(1)  --------->ERF1              --------->RAP2.6(2) --------->RRTF1(1)             --------->ATERF1(1)  --------->DEAR3(2)             <------NtERF2        --------->ORA47(2)             --------->RAP2.3(1)  --------->RAP2.3(1)             --------->RRTF1(1)   --------->ATERF1(1)            ------>NtERF2         <------NtERF2            --------->ABI4(1)    --------->At4g35610            <---------ATERF1(1)  <---------At4g35610            <---------RAP2.3(1)  ------>NtERF2           <---------DEAR3(1)    <---------ATERF1(1)           --------->DEAR3(1)   --------->RAP2.3(3)           <---------ATERF1(2)  --------->ATERF1(2)           --------->RAP2.3(3)  --------->RRTF1(2)           <---------ALFIN1     --------->RRTF1(3)           --------->RRTF1(3)   --------->RAP2.3(2)           --------->RRTF1(2)   <---------ATERF1(2)           --------->RAP2.3(2) --------->RAP2.3(1)           --------->ATERF1(2) --------->DEAR3(2)          --------->ORA47(2)   --------->ORA47(2)          --------->RAP2.3(1)  --------->RRTF1(1)          <------NtERF2        <------NtERF2          --------->ATERF1(1)  --------->ERF1          --------->RRTF1(1)   --------->DEAR4(2)          --------->ERF1       --------->RAP2.6(1)          --------->DEAR4(2)   --------->ATERF1(1)         <---------RAP2.3(1)  <---------RAP2.3(1)         <---------ATERF1(1)  ------>NtERF2                          ---------->DOF2         <---------DEAR4(2)   <---------RRTF1(1)                 --------->ANAC58     --------->TOE1(3)        <---------DEAR3(1)    <---------ATERF1(1)             ----------->HVH21 <---------DAG2       <---------ABI4(2)     --------->ANAC46------>NtERF2  ------>ZmHOX2a(1)<---------ALFIN1  <-----       --------->ZAT18  <----------DOF2  ------->TEIL      --------->TOE1(2)--------->MYB46(3) ------ -------ANAC58--------->RAP2.3(2)--------->ABI4(1)        ----------->RAV1(2)------->GAMYB    ------- -------ANAC58--------->RRTF1(3)<---------DEAR3(1)  <-------GAMYB--------->ANAC58<----------DOF2 -------ANAC46--------->RRTF1(2)--------->DEAR3(1) ===================RAV <-----------GT1     ------- -----YAB1--------->RAP2.6(1)<---------RAP2.3(2)   <-----------RAV1(1)--------->DAG2  --------->TOE2(3)   gcttgtgagagcgccgccgctatcgtcttttgcgccgccgacgaagctgccctctgttgctcctgcgacgaaaaagtaaccacctttacctgaaaaaaat  9133700                                                                                               ------                                                                                              <------         ---------->DOF2                                                                --------->ARR11(3)      --------->TOE2(3)  --------->TOE2(3)                                              <---------ARR11(3) ----ARR11(3)         <---------CCA1(2)                                                 <---------GLK1(2) --->ARR11(3)      <----------DOF2                                         ----------->GT1    <------ -->RVE1(1)     --------->ZAT6                                <---------ARR11(3)  <---------AHL20(2) -->CCA1(1)   <-----------GT1 --------->MYB46(3)              --------->ARR11(3) --------->AHL20(2) <   ctcatttttcttaaagtaacacttttatctcaacaaatgcaaaaatttggaatttttgagacaatatctagttgaagtgctaaatttatagattttgagg  9133800  Previous    Next  AGI:  At2g21320.1    Description:  zinc finger (B-box type) family protein. similar to zinc finger (B-box type) family protein [Arabidopsis thaliana] (TAIR:AT4G38960.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO47249.1); contains InterPro domain Zinc finger, B-box; (InterPro:IPR000315); contains InterPro domain Zinc finger, CONSTANS-type; (InterPro:IPR002926) Range:  from: 9133344    to: 9134924    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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