Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100            <---------GLK1(2)     <---------ATHB12    ------>MYB46(1)    ------>MYB83   --------->WOX13(1) --------->MYB46(3) ---->MYB46(1)                                 <<<<<<<<<CBP60g ---->MYB83                                    <<<<<<<<<SARD1 ------MYB52(2)                               ------>MYB46(1)                                       - ----->DEAR3(1)                  ----------->RAV1(1)                                                - ---->ANAC58                   --------->At4g35610                                                  - ---->ANAC58                   <---------At4g35610                                           <------- ---->ANAC46               --------->ANAC46   ------>MYB83               --------->YAB1     --------- ---->ANAC55(1)  ------>ZmHOX2a(1)  ----------->GT1         <---------YAB1             ----------->GT1   cgaaccaatcaagcttctcctccaaacacactcagcaacagtgaaaccaaatttcaaacattgtgattcgatctatgaaaacaattgaagagtaagaatt  9109700                                                                                    --------->ANAC58                  <---------ZAT18                                                   --------->ANAC58             --------->ZAT18                                                        <---------ANAC55(2)             --------->ZAT14                                                        --------->ANAC55(2)             <---------ZAT14                                                       <---------LBD16     <---------ARR11(3)                                                    <---------MYB52(1)     <---------ARR14(2)                                                 =============================     <-----------ARR10 --------->ANAC58                                 --------------->AGL15     --------->ARR14(2)--------->ANAC58                                ----------------->AGL1     <--     --------->ARR11(3)--------->ANAC46                             ------>ZmHOX2a(2)--------->LBD16 -------->ANAC58  --------->ZAT14                                  <---------At4g35610            --- -------->ANAC58  <---------ZAT14          --------->YAB1 --------->HSFC1(1)     --------->ARR14(2) -------->ANAC46--------->ANAC46  --------->ARR11(3)      --------->HSFB2a(2)    <---------ARR14(2) --ICU4      <---------ZAT18      <---------ARR11(3)      <---------HSFB2a(2) <---------TOE1(3)  <--- >ICU4     --------->At4g35610<-----------GT1    --------->YAB1    --------->At4g35610           ----   acaagcagatattagcacactgaactcgcaattcactatcttcaaacaaaatcaaaacttctcgaattgatctgccagttagggttccgcaattgattca  9109800                                                                         --------->WRKY18(1)                                                                       <------MYB46(1)                                                                       <------MYB83                                                                 <---------AHL20(2)                                                     --------------->AGL15     <------ZmHOX2a(2)                                                     <---------------AGL15    <---------ARR11(3)         --------->WOX13(1)                         --------->ANAC46  --------->MYB59          ------ ====================================================================MADS_MADS--------->ARR11(3) -------ARR14(2)                                  <-----------GT1<---------AHL20(1)  --------->DAG2 ------>ARR14(2)                         <------ZmHOX2a(1)       --------->AHL20(1) --------->DAG2>>> ------At4g35610                       <---------TOE2(3)         --------->AHL20(2)---------->DOF2--- ----->At4g35610                 <---------ARR11(3) ----------------->AGL1  --------->ICU4   <-------   gataccaaaatcaatctgagctagtcagagaaacaggtcttaaggaacaattttacgaaaattggaataaattaggtcaagatcaaaaaggtcgaatcaa  9109900                            --------->ANAC46                           --------->LBD16                           --------->HSFB2a(2)                          <---------ANAC46      ------>MYB83       <---------LBD16      ------>MYB46(1) --------->KAN4(2)                                  <---------ZAT6 --->WOX13(1)        <---------KAN4(1)                       --------->YAB1  <-------TEIL >>>>>>RAP2.2        --------->KAN4(1)                       --------->AHL20(2)                 <---- ------>TOE2(3)     <---------KAN4(2)                       --------->ICU4  --------->CCA1(2) ------- --ATHB12 ----------->HVH21<---------HSFB2a(2) ----------->GT1   <-----------GT1       --------->YAB1   tctaaaccttccatgacaagagattattccgcgaaacaatagaaaacaagggtgaaactgaaattataaaccctagagatacaacacattcaaaattgat  9110000                                                              --------->GLK1(2)                   ---                    ---------->DOF2                           --------->ARR11(3)                  <--         --------->AHL20(2)     <---------At4g35610           <---------ARR14(2)                 ----         <---------AHL20(2)     --------->At4g35610    ----------->GT1                           ----     <---------AHL20(1)      ---------->DOF2           --------->LBD16                           ----     <---------AHL20(2)    --------->ANAC58           --------->HSFB2a(2)                        <---     --------->AHL20(1)    <------NtERF2              <---------HSFB2a(2)              <---------HSFB2a(2)     --------->AHL20(2)    --------->ANAC58           --------->HSFC1(1)               --------->HSFB2a(2)    --------->AHL20(2)    ------>NtERF2               <---------HSFC1(1)              ------>ZmHOX2a(2)    <---------AHL20(2)--------->DAG2    --------->ARR14(2)    --------->ARR14(2) <---------WOX13(1) -----WOX13(1)    <------ZmHOX2a(1)     <---------ARR14(2)   --------->RVE1(1) --------->ATHB12  <--- -->ATHB12---------->DOF2<---------ANAC46          --------->GLK1(2)       ----------->GT1   --------   taacaaataaattaaagagaggaaaaggcgcgaaagcttacgaattcgatgagcttctggaaaaaatctgggcaaaatggataattgatcgagaagaaag  9110100 ---------->DOF2 ------>CCA1(2) ----ZmHOX2a(2)                                ------------>CBF               <---------At5g28300 ----->ARR14(2)                              --------->At4g35610             <-----------GT1 ----->ARR11(3)                      --------->HSFB2a(2)                  ------>MYB46(1) ----->AGP1                          <---------HSFB2a(2)                  ------>MYB83 ------ARR14(2)                      <------NtERF2             <-----------TGA1 ------ARR11(3)                  <-----------HVH21--------------->AtSPL8<---------MYB59 -->DOF2                       *TSS  --------->LBD16  ------->TEIL   <-----------GT1   atccaaagggtagagagagagagagatagtgtctctgtccgcgaagaagctcaatgtacttacttcgtcatttaccaaattaccctcttctctactacta  9110200                                                            --------->ATHB12                                                           <-------TEIL                                                        -------->HAHB4                                                        <--------ATHB1                                  --------->ARR14(2)    --------->ATHB12                                  <---------ARR14(2) <---------ICU4                             --------->AHL20(2)      --------->YAB1                             <---------AHL20(2)  <---------YAB1                         <----------DOF2<----------DOF2--------->ICU4                <---------ARR14(2)<---------ARR11(3)<---------ATHB51                --------->ARR14(2)--------->ARR11(3)--------->ICU4                              -----                <---------ZAT14  --------->CCA1(1)  <---------ATHB12           --------->AHL20(2)                --------->ZAT14  --------->RVE1(1)--------->YAB1               <---------AHL20(2)      --------->GLK1(1)---------->ID1 ------>ZmHOX2a(1)<---------YAB1   <-----------GT1    ----------   aacaagagaaatcaagggtatactcgtctttttaaatatcctctttcagttacaataatgattcattgtggatttaagcatataaatagagaagagagaa  9110300                                                         <-----------GT1           --------->CCA1(2)     <-----------GT1                             --------->GLK1(2)                --------->ARR14(2) ---->GLK1(1)                                --------->YAB1                       <---------ARR14(2) ->GT1  <----------DOF2 --------->ARR11(3)  <---------ATHB12                  ---------->DOF2   atctatatcactttccatcaatgtgtgatattgtagtacttaagaaatcataatctgtttaacaacatgagtttatgtatgaaagataggctcacaaaca  9110400                         <---------ANAC58                         <---------ANAC58                --------->DAG2               ---------->DOF2           <---------TOE2(3)                                                                      <--           <---------TOE1(3)            <---------CCA1(2)  <---------AHL20(2)                    ----          <-----------RAV1(2)      <---------MYB52(1) <-------TEIL                               <---   tttgagaatgtttcaggtaaagctatggcttcttctcgttgtttatcttcttaagcttcatttattcatgtagatagagagagtgtgatcaagcgtagag  9110500                              --------->SPL7                            <---------SPL7                           <---------ANAC58                           <---------ANAC46                       <---------DEAR3(2)                       <---------MYB46(3)                       <------MYB46(1)                       <------MYB83                       --------->MYB55(2)                      <---------AtMYB61                      --------->MYB111(1)                     <--------P <---------ANAC46                    <-------GAMYB                   <------MYB46(1)                   <---------MYB46(3)                   --------->MYB55(2)                   <------MYB83 ----------->GT1       --------->HSFB2a(2) <---------ANAC58       <---------HSFB2a(2)<-------TEIL            <----------DOF2 ----ZmHOX2a(2)  <---------ANAC46        ------>ZmHOX2a(1)                   <---------MYB52(1)    -- ----->ARR11(3)  <---------ANAC58     <-----------GT1                   <----------DOF2         ----- ------ARR11(3)  <---------ANAC58    <-----------GT1                  ------>ZmHOX2a(1)         -----   atcaatgttccaaaacttggctggttggttcgtgcggtatttcctctccatgcttttgatcacttccatgtcctctttcgatagttcgaagtcgaaaacc  9110600  Previous    Next  AGI:  At2g21240.1    Description:  ATBPC4/BBR/BPC4/BPC4 (BASIC PENTACYSTEINE 4); DNA binding / transcription factor. similar to ATBPC5/BBR/BPC5/BPC5 (BASIC PENTACYSTEINE 5), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT4G38910.1); similar to unknown [Populus trichocarpa x Populus deltoides] (GB:ABK96608.1); contains InterPro domain GAGA binding-like (InterPro:IPR010409) Range:  from: 9108397    to: 9110131    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At2g21250.1    Description:  mannose 6-phosphate reductase (NADPH-dependent), putative. similar to mannose 6-phosphate reductase (NADPH-dependent), putative [Arabidopsis thaliana] (TAIR:AT2G21260.1); similar to NADPH-dependent mannose 6-phosphate reductase [Orobanche ramosa] (GB:AAG15839.2); contains InterPro domain Aldo/keto reductase; (InterPro:IPR001395) Range:  from: 9110288    to: 9112268    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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