Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                    --------->MYB52(2)                                                                  <---------MYB46(3)                                                      <--------ATHB1                                                      --------->ATHB51                                                      -------->HAHB4                                                      <---------ICU4---------->ID1                                                      --------->ATHB12                  ------>ZmHOX2a(2)                  --------->ICU4<-------GAMYB        <---------WOX13(1)                ------->TEIL                         <---------AHL20(2)              <---------YAB1                <---------ARR14(2)    <---------YAB1 --------->AHL20(2)              <---------AHL20(2)                --------->ARR11(3)  <---------bZIP60(1)   --------->ATHB12          --------->AHL20(1)                <---------ARR11(3)  --------->bZIP60(1) <---------WOX13(1)          --------->AHL20(2)      --------->ANAC46      --------->YAB1           <---------ATHB51               <---------AHL20(1) --DOF2         --------->ARR14(2)--------->YAB1     <---------ATHB12          --------->AHL20(2)   agttatacacactatatggatcttcaaaaattagaatgatatcatttactctcaaataattgatgggtttgttgttttatataaaatataattgatggtt  9096000                                                                                          -----------                                                                                      --------->AHL20(2)                                                                                  <---------YAB1                                                                                 ------>ZmHOX2a(2)                                                                                 ====================                       ------>ZmHOX2a(2)                                        <------ZmHOX2a(2)                      <------ZmHOX2a(2)                                        <---------ARR11(3)                     --------->ARR14(2)                                        --------->ARR11(3)                     <---------AGP1                                            --------->ARR14(2)                     --------->ARR11(3)                                        <---------ARR14(2)                     <---------ARR14(2)                        <---------YAB1  <---------AGP1                    <---------CCA1(2)                          <---------TOE2(3)=====================                  <--------P                             --------->AHL20(2)    --------->GLK1(2)          <----------DOF2     <----------DOF2            <---------AHL20(2)   <------ZmHOX2a(1) <----      <----------DOF2<---------ARR11(3)  <----------DOF2 --------->ICU4     <---------TOE1(2)   =====   ttgttgaactttctttgatggtagatctcattctttattagggctttaatatagttgtattaattaacatagttttagtaggatctgattatatgacagg  9096100                                                                               <<<<<<<ZML2                                                                            --------->HSFB2a(2)                           --------->AHL20(2)                               <---------HSFC1(1)                           ---------->DOF2                                  --------------->AGL15                      <------ZmHOX2a(2)                                     <---------------AGL15          --------->ARR14(2)                                                --------->HSFC1(1)     ----------->GT1 --------->ARR11(3)                                     ========================= >HVH21   <---------ARR14(2)                                                <---------HSFB2a(2) ==HOX2a_HOX2a       <---------ARR11(3)                               <---------AHL20(2)         ---- ==HOX2a_HOX2a   ---------->DOF2                                   --------->TOE2(3)           <----- --ZmHOX2a(1)  --------->LBD16                                     ----------->GT1             ------ ============================HOX2a_HOX2a        --------->TOE1(2) ----------->GT1     <---------MYB46(3)   aagtgtttagtaaatcccccaaagatcaataaaacacatatggtctaaaacctagtagcatccatgaaatgttaaattctagaactagtagttgagttaa  9096200                                                                          <---------ARR14(2)                                                       <---------------AGL15                                                       --------------->AGL15                                                      ----------------->AGL2                                                <-----------GT1           --------->ARR14(2)                                              <---------AHL20(2)          --------->GLK1(2)     <-----------GT1                        <---------AHL20(2)            ------->TEIL             --    --------->ZAT14                 <---------YAB1    <-----------------AGL3                      <-- =======================================================================MADS_MADS                ---- ----->ANAC46                    <---------MYB52(1)   ----------------->AGL3                  <------ ----DOF5.7(2)                 <---------ANAC55(2)    <-----------------AGL2                  ------- --->MYB52(1)                  --------->ANAC55(2) <----------DOF2 <---------HSFB2a(2) <-----------GT1   cgacattacactcttccaaagttaatcgacattacgttatgtttatattttttctttctatattcagtactagacgaatccatcgaaattgactatatat  9096300       <---------YAB1    --------->ICU4  <--------ATHB1  <---------ICU4  --------->YAB1  --------->AHL20(2)                     <-----------HVH21           --------->ICU4  <---------AHL20(1)                    --------->YAB1           --------->LBD16  <---------AHL20(2)                    <---------ICU4           ------>NtERF2 --------->ICU4                       --------->ANAC58          --------->ANAC46 <---------YAB1                    <---------SPL7              <---------LBD16 ------->YAB1                     <---------ANAC58      ------>ZmHOX2a(1) -------AHL20(2)       ----------->GT1--------->ANAC58  <---------YAB1            <-----------GT1 ----->AHL20(2)  --------->ANAC58 <---------ANAC58     --------->TOE2(3)       <----------DOF2 ---AHL20(2)     --------->ANAC58 <---------ANAC46  --------->ARR14(2)    <-----------GT1 -->AHL20(2)--------->YAB1   <------------CBF    <---------ALFIN1----------->RAV1(1)            -----   ataataattttgaataatcaagaaatcgaaatattggcgtaagcatcacatccacatcctcattctccgccataaataaccctttcaccatctctcactt  9096400                                                                         ------>ZmHOX2a(2)                                                                        <------ZmHOX2a(2)                                                                       <---------ARR14(3)                                                                       <---------ARR11(3)                                                                       <---------ARR14(2)                                                                       --------->AGP1                                                                       --------->ARR14(2)                                                                       --------->ARR11(3)              --------->TOE2(3)                                        --------->ARR14(3)              --------->AtMYB61                                --------->At5g28300             --------->ANAC46                                  <-------GAMYB           --------->ANAC46                                   <---------MYB46(3)       *TSS--------->REM1(1)                                 <---------RAP2.6(2)                 ----   --------->LBD16                                   --------->ANAC58 <---------GLK1(1)     ---------   ------>NtERF2                        --------->ANAC58     <---------ANAC46---------->DOF2---------  --------->ANAC46                 ------>ZmHOX2a(1) --------->ANAC58 --------->GLK1(1)     --------- <---------LBD16        <<<<<<<<<TBF1   --------->ANAC58     <---------DEAR3(1)             --------- ---->ZAT14<---------ALFIN1<<<<<<<<<TBF1--------->ANAC46   ------------>AtMYB77      --------->ZAT6   ctctccgccatctacacctcaacttcttcttcttctcctctcaagaaacaataactagcaatggcggttaagagatcttcaaagctaacacaaaccgcaa  9096500                                                            ----------------------->TaNAC69(2)       --------->GLK1(1)                                   <------MYB83       <---------GLK1(1)                                   <------MYB46(1)   --------->ANAC58                                       <---------AtMYB61         <-----------HVH21   --------->ANAC58         <---------ANAC58          <---------TOE2(3)         --------->MYB52(1) ----->ICU4       --------->CCA1(2)    --------->GLK1(2)<------ZmHOX2a(1)      ---------->DOF2 >ANAC46    ------>ZmHOX2a(1)     xxxxxxxxxxxxxxxxxx>smallRNA(se3)          ------->TEIL      ------- >ANAC58--------->ARR14(2) --------->ZAT2         --------->YAB1          <---------SPL7     -------- >ANAC58<---------ARR14(2) <---------ZAT2        --------->ICU4       <---------ETT(2)      <-------- >RAP2.6(2)--------->TOE2(3)<---------ANAC58     <---------YAB1     --------->REM1(2)      <---------LBD16   tgctgaagcaaatcctcaagagatgctcgagcttggccaagaatcaatgctatgatgaggatggtctgcctgtagacgtaccaaagggtcatttcccggt  9096600                            <---------SPL7                           --------->TOE1(1)                           --------->TOE2(1)                                 ------->GAMYB                       <-------TEIL                                   <---------ANAC58                       --------->SPL7                                 <---------ANAC58                     <---------MYB52(1)                           <---------ANAC58                    <---------DEAR3(2)  ------>ZmHOX2a(1)         <---------ANAC58                  <------NtERF2     <---------ARR11(3)          <---------ARR11(3)--------->At4g35610                <---------ARR14(2)  --------->ARR14(2)          --------->ARR11(3)<---------At4g35610 -->LBD16       --------->ARR14(2)  <---------ARR14(2) <---------TOE1(2) --------->REM1(1) ->LBD16       <------ZmHOX2a(1)   <---------CCA1(2)  ------>ZmHOX2a(1)<---------------AGL15        - -LBD16  ---------->DOF2  --------------->AtSPL8     --------->TOE2(3)<-----------------AGL1      <--   ctatgtaggcgaaaagaggagccggtacatcgtacccatatccttcttgactcatcctaagttcaagagcttgcttcaacaggcagaagaagagttcggg  9096700        <---------bZIP60(2)   <---------ICU4   --------->YAB1  <---------ATHB12                                            --------->ATHB12        ---------------  --------->ICU4         <---------ANAC46                 <-------TEIL       --------->ALFIN1 -------->WOX13(1)       <---------ANAC58         <----------DOF2          --------->ALFIN1---------- -----TEIL               <---------ANAC58     <---------At4g35610------>ZmHOX2a(2)   ---------->DOF2   ttcaatcatgacatgggactcactattccttgtgaagaagttgttttccgctctttaacatccatgatcggatgagggagtgggagagaaagagaaagag  9096800                                            <---------AHL20(2)                                           <---------AHL20(2)                                           --------->AHL20(2)                                 <---------AHL20(2)                                 --------->AHL20(2)                            <---------AHL20(1)                  <---------YAB1        <-----------GT1                            --------->AHL20(1)                  ------->TEIL    <---------AHL20(2) --------->ANAC81          <---------AHL20(2)              <---------AtLEC2    --------->AHL20(2) >DOF2    <---------At4g35610<---------AHL20(2)    <-----------GT1             <---------AHL20(2)   agagagagagagagcttataaacatctatatatatttatatcaaatttttttgttacctttggatgaatattgaatccaaattttttttttctgaactat  9096900  Previous    Next  AGI:  At2g21220.1    Description:  auxin-responsive protein, putative. similar to auxin-responsive protein, putative [Arabidopsis thaliana] (TAIR:AT4G38860.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN82489.1); contains InterPro domain Auxin responsive SAUR protein (InterPro:IPR003676) Range:  from: 9096407    to: 9096894    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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