Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                             --------->ZAT6                                 --------->AHL20(2)      ----------->RAV1(1)                            --------->ICU4            ------>MYB83                       --------->ANAC46               ------>MYB46(1)                            ----       --------->YAB1  --------->ANAC58            --------->ANAC58                              ---- -->ANAC46  --------->TOE2(3)    <---------AHL20(2)--------->ANAC58      <------ZmHOX2a(2)      ----- -->ANAC55(1)          --------->ANAC58      --------->ANAC58           <---------ARR11(3)   -------- -->ANAC58  <---------MYB59 <---------ATHB12 --------->ANAC46    --------->MYB46(3)          -------- -->ANAC58 <---------ANAC55(2)  --------->AHL20(2) --------->ANAC46 --------->ANAC46         -------- ---ANAC55(2)    --------->AHL20(2)  <---------AHL20(2) --------->MYB46(3)               <---------MYB52(2) -->ANAC55(2) *TSS   --------->CCA1(2)       --------->ANAC58   -------->P   --------->AGP1--------->MYB52(1)   aaacatcaagaatacctaaaaatatacgaaatcatttatttacataaacgcaaacccaacaacactaaccacgagatcagaactagtagtagcaaacgca  9083700                                                                                                   <-                                                                                              <------NtERF2                                                                                              <------    --------->MYB46(3)                                                                        -------    --------->DEAR3(1)                                                                      <--------    ----------->HVH21                                                                      --------->LBD16   <---------At4g35610                                                    --------->At4g35610------>NtERF2 ----->GLK1(1)                         <---------ANAC58          --------->ANAC46          <---------LBD16 ----->At4g35610                       <---------ANAC58         <---------LBD16           --------->DEAR3(1) -->TEIL                              <---------TOE2(3)        --------->MYB52(1)        --------->MYB46(3) ->ANAC46                           ----------->HVH21         ----------->HVH21        --------->ARR14(2) ->ANAC58    ----------->HVH21    <----------DOF2           --------->At4g35610        <---------ARR14(2) ->ANAC58<---------ZAT14       ------>ZmHOX2a(2)            <---------At4g35610   --------->MYB52(1)   tctccagcgaccgcagggacagtagtaagtagatcgctttgacgtttcaagacaagagagacatctcacggcgaagagcagagccaatggaaccgcggct  9083800                 <---------ARR11(3)                                                           <------                 --------->ARR11(3)                                                         <--------  <------ZmHOX2a(1)                                                                  <------NtERF2<--  --------->ATERF1(1)   ----------->RAV1(2)                  ---------->DOF2        ------>NtERF2<--- -----ZmHOX2a(1) <-----------ARR10                    <---------LBD16              <---------ALFIN1 ---ZAT2      <---------ALFIN1<------ZmHOX2a(1)   <-----------GT1         <------ZmHOX2a(1) --------- -->ZAT2     <---------At4g35610         --------------------->WRI1      <----------ID1    --------->ICU4 -DEAR3(1)   --------->At4g35610    <---------At4g35610     <------ZmHOX2a(1)     <---------ABI4(2)   aggaggagccaactcagcacatcttcgcctgaggagacagcaacttcgaatttaacgacggaggaaagggctaagaggacgagggccaccgtgatcatga  9083900                                            --------->MYB46(3)                                            --------->ATERF1(1)                                           --------->ZAT2                                           <---------At4g35610                                          ----------->RAV1(1)                                        --------->At4g35610                                        --------->ZAT2                                        <---------At4g35610                                        <---------ZAT2                                     --------->LBD16                                     --------->At4g35610                                     <------NtERF2                <---------TGA1a      <---------At4g35610                --------->TGA1a     --------->ANAC46                --------->O2       --------->SPL7--------->LBD16     --------->ANAC46            <---------SPL7 <---------ANAC58     --------->LBD16             <-----------HVH21    <---------ATERF1(2)         --------->DEAR3(1)    --------->ATERF1(2)      --------->ANAC46   <---------ANAC46   <---------LBD16           <---------ALFIN1   <---------ANAC58  --------->MYB52(1) <---------ARR14(2)----------->RAV1(1) ---YAB1        <---------O2--------->ZAT14<---------ZAT2    --------->DEAR3(1) -ICU4     ===============MYC_MYB--------->ORA47(1)        ------->TEIL -------------AGL15  --------->ARR14(2)XXXXXXXXXXXXXXXXXXXX>MIR834 ------YAB1------->GAMYB    <---------ZAT14--------->At4g35610                            <---------AHL20(2) >YAB1  --------->MYB52(1)  <---------REM1(2) --------->At4g35610              <----------DOF2      -   ctattaccggcaacggagacgtcgatactctacaccgtccgcagcagcagccgtggtaatgcatcgccctctcactgttttctttggtttgtttaatggt  9084000                                                                                        <---------ZAT18                                                                                        --------->ZAT18                                                                                        --------->ZAT14                                                                                        <-------TEIL                                                                                     <------MYB46(1)                                                                                     <------MYB83                                                                                    <---------------AtSPL8                                                                                    --------->MYB59                                                                                    --------->MYB111(1)                                                                                    --------------->AtSPL3                                                                                    --------->MYB46(2)                                                                                    --------------->AtSPL8                                           ----------->GT1                          --------->MYB52(2)                                   --------->ANAC46                                <---------MYB55(1)                                  <---------LBD16             --------->DAG2      <---------MYB52(1)           <-----------HVH21      --------->LBD16      ---------->DOF2            <<<<<<<<<MYB98    -      --------->ATHB12            ------>ZmHOX2a(1)---------->DOF2     --------->ARR11(3)     <------  --------->ATHB12      <----------DOF2  --------->ARR11(3)  ---------->DOF2    --------->MYB52(2)  < -------->ANAC55(2)     <---------DAG2   <---------ARR11(3)--------->ARR11(3)   <---------MYB46(3) --   ttacttattgatttgtcaaatgctagctttttattcctcggaagatagtgaaacaaagaaagataaagcgagagataatggtttgttaggtacactataa  9084100       --------->YAB1      <---------YAB1   --------->ICU4   <---------AHL20(2)           <---------------AGL15                 <---------DOF5.7(2)   <---------YAB1            *TSS                                     --------->MYB52(1) -------->ARR11(3)    <-----------GT1 <---------HSFB2a(2)          <---------ANAC58 ---YAB1 <---------YAB1     <---------ATHB12       <---------ICU4  <---------ANAC58 ---------ARR11(3) <---------YAB1     --------->HSFB2a(2)  --------->STY1(2)                  <------ ------->YAB1    --------->YAB1 --------------->AGL15      <---------STY1(2)           ----------->GT1   atgatattattatggtcgatgatgataccactcactgtttttagaaaaaaacataagtactagctagtggggtaacgaaggaatttatgtggtaatttac  9084200                                                --------->KAN4(2)                                               --------->GLK1(1)                                               <---------KAN4(1)                                               --------->HSFB2a(1)                                               <----------TaMYB80                                               <---------HSFB2a(1)                                               <---------GLK1(1)                                               --------->KAN4(1)                           <---------ICU4                                              --------->ARR14(2)                <------MYB46(1)                                              <---------ARR11(3)         --------->ANAC55(2)                                              <---------KAN4(2)          <---------ANAC55(2)  <------                                              <---------ARR14(2) --------->At4g35610    --------->YAB1       <---------ANAC46                       --------->ARR11(3) <---------ZAT2 <------MYB83  ------- -----GT1                                     ---------->TaMYB80 <---------At4g35610 --------->YAB1 -   atatgtgttttgtggattagtcagaccatagtttctctaatttcaagggatattcgtattgatactaagctgattaagtatttggtttcatcatatttat  9084300                             ------>ZmHOX2a(2)                            <------ZmHOX2a(2)                           <---------ARR11(3)                           --------->ARR14(3)                           --------->AGP1                           --------->ARR14(2)                                     --------->LBD16                           <---------ARR14(3)                                    --------->ANAC46             ======================HOX2a_HOX2a                                   --------->ANAC58 <---------ANAC58          --------->ARR11(3)                                    --------->ANAC58 <---------ANAC58          <---------ARR14(2)                                   <---------LBD16 <---------ANAC46        ----------->ARR10                                <------ZmHOX2a(2) ---AHL20(2) <------ZmHOX2a(1)       --------->TOE2(3)                    --------->PCF2   <---------HSFB2a(2) -->AHL20(2) =======================HOX2a_HOX2a             <-----------GT1  <---------ALFIN1   ----- --------->ID1         ---------->DOF2               --------->AtLEC2  ------>ZmHOX2a(2)   --------->HSFB2a(2)   tttgcgtttttcttaggacaaattacaaagatcttctatccttgatgttgtctcgatgcaaattacatttggatcgatcccacccgcatatttctcgacc  9084400                   --------->ANAC58              --------->ZAT18              <---------ZAT14                                         --------->ANAC55(2)       ------>ZmHOX2a(1)                                              <---------ANAC55(2)      --------->TOE1(3)                  <---------ANAC58           --------->AHL20(2)       <-------      --------->TOE2(3) --------->GLK1(1)<---------ANAC58    ----------->GT1                 <-------  <----------DOF2  --------->ANAC58      <---------ANAC46  <----------DOF2  <---------AHL20(2)     <- ---->AtMYB61 <---------ZAT18 <---------TOE2(3)      <---------ICU4 <---------AHL20(2)   <----------DOF2   tctcctttccttagagtgctcaagcgatttctaatgttattttgcgtttatatcatcttcactttgttaattaagtattttcttagtcttcctttgctta  9084500                                      <---------GLK1(1)       --------->STY1(2)         ------->MYC3                ----------->GT1        <----------DOF2 <       <---------STY1(2)         <-------MYC3         ---------->DOF2               --------->TOE2(3) --ANAC58              --------->ANAC58             ------->GAMYB              --------->YAB1 <------ --ANAC58              --------->ANAC46             --------->AtMYB61   <---------HSFB2a(2)   ------- ---------DOF2         --------->ANAC58            --------->MYB46(3)   --------->HSFB2a(2)  <-------   gctttcgctagctatcgtctcatacacacaatacacatggagttctcaattcaaccaaaagacaagtgaaatttgtagaaatgatactttaacaaatgat  9084600  Previous    Next  AGI:  At2g21185.1    Description:  unknown protein Range:  from: 9083518    to: 9084129    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At2g21187.1    Description:  other RNA Range:  from: 9083614    to: 9084129    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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