Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                              <---------RAP2.6(3)                           --------->RAP2.6(2)                                          <---------DAG2 --------->HVH21        --------->ANAC46                                         --------->ANAC58 ----->TGA1a  --------->ANAC46                                                   --------->ANAC58 ----->O2     --------->ANAC58                                               --------->ANAC58       - ----->ANAC55(2)        --------->ANAC58                                     --------->ANAC58   <---- ------O2     --------->ANAC58 <----------DOF2                            ------->GAMYB <----------DOF2 ------ANAC55(2)        --------->ANAC58      ------>ZmHOX2a(1)        ----------->RAV1(1)      -----   catgacatgttcttacacacaaaaacaagccgtcttttgaattgattcctacataaactgagacaattactctcaacagaagcaagcaaacttttttcag  9050400                                                                                               ------                                                                                              <------                                                                                             <-------                                                                                            ---------                                                                                           ----------                                                                                           <---------SPL7                                                                                          <----------                                   --------->AtMYB61                                      <---------DAG2                             --------->At4g35610                                         <-----------                    <-----------RAV1(1)                                                  ------------         <---------ANAC46    <---------At4g35610                                         ============       <---------ANAC46  <---------AtLEC2                                                ------------ -------->GLK1(2)   --------->ALFIN1                ------->GAMYB                       -------->P -----At4g35610  --------->DAG2   <---------ZAT18 --------->At4g35610           ---------->DOF2<----- ---->At4g35610 ---------->DOF2   --------->ZAT14 <---------At4g35610 --------->YAB1   <-----------GT1   ctaatcttgttgtggatgaaaagtgttgcatagcagaccactcgtgtttctcaactgcatatataactagaatcaagacttgaaaagacttaccttacgg  9050500                                                                                 --------->ANAC58                                                                                 --------->ANAC58                                                                           ----------->HVH21     <-------TEIL                                                         ------->MYC3    --------->CCA1(2)                                                     <-------MYC3   --------->ARR14(2)                                                    ============================   <---------ARR14(2)                                                    --------->ANAC46   --------->ARR11(3)                                                    --------->TGA1a --->LBD16                                                               <---------O2--------->ANAC58 ---ANAC46                            ---------->DOF2                    --------->ANAC55(2) --LBD16                              =============================================bZIP_DOF >MYB52(1)                     --------->DAG2                            --------->O2----------->GT1 ->HVH21--------->ANAC46      ---------->DOF2                            <---------TGA1a   <--------- -----AGL15                 --------------->AGL15                        <---------ANAC55(2) ------AGL1                 <---------------AGL15                        ============================ ----->AGL1                ----------------->AGL3                      <-------------DYT1  <---------DAG2 ============================================MADS_MADS               <-----------HVH21  <-----------GT1 ----->AG                  ----------------->AG                     --------->ANAC46 --------->ANAC58 ----LBD16                 ----------------->AGL2           ----------------------->TaNAC69(2)    <--   ggaaagatacacagagccaagttggattacccaaaagtagtaaaggagagagagagagagagggttcttcacttcacgtgactaagcaagttacttttgc  9050600                                                                                      --------->ALFIN1                                                                                     <-------MYC3                                                                                     <-------MYC2                                                                                     ------->MYC2                                                                                     ------->MYC3                                                                                  <---------ANAC58                                                                                  <---------ANAC58                                                                         <---------ANAC58                                                                         <---------ANAC58         <---------GLK1(2)--------->MYB46(3)                           --------->ARR11(3)  <---------ZAT14 =bZIP_DOF               -------->P                 <---------ARR11(3) <---------ARR11(3) --------->ALFIN1 -DOF2   --------->ARR14(2)------->GAMYB            --------->ARR11(3)<---------CCA1(2)   <---------REM1(1) =bZIP_DOF     <---------DAG2          <---------YAB1       <---------ALFIN1      <---------ANAC46 --------DOF2  <----------DOF2         ----------->GT1     --------->MYB46(3)<---------AtLEC2--------   ctttctctccagtttctctttttgatcaaccatcgtttgtgatgaaaaatgtaagacctctaccacctatatatatcttgcattgcatgtgggtgtagtt  9050700                                                                                            ------>ZmHOX2a(1)                                                                                        <---------ARR14(2)                                                                                   --------->CCA1(2)                                                                                  --------->ARR11(3)                                                                                  --------->ARR11(1)                                                                      <-------TEIL<---------ARR11(3)                  <----------DOF2                                   <-----------------AG--------->ARR14(2)               <-----------GT1       ----------->TBP       <---------ALFIN1     *TSS <---------YAB1    <------------CBF          --------->MYB46(3)      ------>ZmHOX2a(2)--------->ATHB12 ------->TEIL --->GT1<---------YAB1     ----------->HVH21 <----------DOF2    <----------DOF2 ----------->ARR10 ---   attttgaattgtcattttctcttttcgcagtgaccacctatatataactttggtgatccctcaaccctttgattcatttggaaagatatgaatcctggtg  9050800                          <---------ALFIN1                      ------>MYB46(1)                      ------>MYB83                    --------->DEAR3(1)                                                   <---------ANAC58                   <---------At4g35610                                                <----------DOF2                   --------->At4g35610                                    --------->ATHB12                 --------->REM1(1)     --------->ANAC58      <---------ANAC58    --------->LBD16                 <---------ALFIN1      --------->ANAC58      <---------ANAC58   --------->ANAC46               <-----------HVH21      ------->GAMYB--------->TOE2(3)     <---------YAB1  <---------ANAC58               ------>ZmHOX2a(1)     <---------ALFIN1     <---------ARR11(3)   <---------LBD16     -- ------>ICU4XXXXXXXXXXXXXXXXXXXXX>MIR472           --------->TOE1(3)   <---------At4g35610         ==   aagatgaatactttctccttcacctcccaaacctctctaacacccccttacaaccttcaaaatccttgccttctgatgatttgcgcaactttcgtcttct  9050900                  =================HOX2a_HOX2a                  <------ZmHOX2a(2)   --------->DAG2            <----------DOF2 ------>ZmHOX2a(1)        <---------ZAT18    --------------->AGL15        --------->ZAT18   <-----------------AGL1    <-----------RAV1(1)   <-----------------AG            ----------------------->TaNAC69(2)    --------->ALFIN1     ------>ZmHOX2a(1)       ------>ZmHOX2a(1)   <-----------GT1 ---->ZmHOX2a(1)  ==============HOX2a_HOX2a    <---------ANAC46  <---------ZAT6 ========================HOX2a_HOX2a ---------->DOF2    <---------YAB1  <---------DAG2 --------->YAB1   cctcaagtggtgcgctttggatcactcctcctcttgtggtaaagctgtgtcctatatgatgtttgtagtcttcaccttactagtccctctcataagttgt  9051000                                                                                           <------NtERF2                                                                                           <---------MYB52(1)                                                                                          <---------RAP2.6(3)                                                                                          <----------                              <---------At4g35610                                         <----------                              --------->At4g35610                                         ------>NtERF2                    --------->DEAR3(2)                                              <---------ANAC58              <---------HSFB2a(2)                 <----------DOF2                   <---------ANAC58              ------>ZmHOX2a(1)      <---------YAB1                          --------->GLK1(2)              <---------HSFC1(1)  --------->ARR14(2)                        <---------GLK1(2)              --------->HSFC1(1)  <---------MYB52(1)                      --------->LBD16--------->bZIP60(1)              --------->HSFB2a(2) <---------ARR14(2)                     <---------HSFB2a(2)    <----     --------->YAB1--------->MYB52(1)<---------TOE2(3)                   --------->HSFB2a(2)---------   ctgtttatcaaaactcctagaaaccggccttcagcagttatggatgcgaactctttcaatgtgctcgtccagtttccagagtctggacttgccgtcattg  9051100 <---------ANAC58                                                                 <---------ARR14(2) <---------ANAC58                          --------->HSFC1(2)                     --------->ARR14(2) -TGA1--------->ZAT6                       <---------HSFC1(2)      --------->TOE2(3)     --------->ANAC46 -HVH21                     --------->ARR11(3)       <---------ANAC58        <---------ANAC46    ---- -----MYB46(3)              --------->AHL20(1)       <---------ANAC58        <---------ANAC58-------- >ATHB12     <---------AHL20(1)         ---------->DOF2   <---------YAB1     <---------ANAC58<-------   gtttcttgactctaatatgtttcttcagaatatatagtctcacaaagcttctgtttcttgatgattctaccttggtgaggcttggatattcacgagaact  9051200          <---------ANAC58          --------->ANAC46          <---------ANAC55(2)          --------->ANAC55(2)                     <---------ARR14(2)                --------->DEAR3(1)          <---------ANAC58                     --------->HSFB2a(2)                --------->At4g35610       <---------SPL7        <---------------AtSPL3                               --------->LBD16  --------->ANAC58------>MYB83                 <---------HSFB2a(2)                ------>NtERF2  --------->ANAC58------>MYB46(1)          <---------ANAC58                      --------->DEAR3(1) ------->HVH21  <---------MYB59            <---------ANAC58                     <---------LBD16 ->ARR11(3) --------->DOF5.7(2)        <----------DOF2                        --------->ANAC46     <- --ARR11(3) <---------MYB52(1)   <---------At5g28300                     <-----------GT1   <---------YAB1   tgacaaggccttacgttacctagcctacatacttgtaccgtctttccttgtggaacttgtgcataagagcatatttttctactccgccgaagtatcattt  9051300  Previous    Next  AGI:  At2g21070.1    Description:  FIO1 (FIONA1). similar to hypothetical protein OsI_005487 [Oryza sativa (indica cultivar-group)] (GB:EAY84254.1); similar to Os02g0121200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001045716.1); contains InterPro domain S-adenosyl-L-methionine dependent methyltransferase, Mett10D, predicted (InterPro:IPR017182); contains InterPro domain S-adenosyl-L-methionine dependent methyltransferase, predicted (InterPro:IPR010286) Range:  from: 9047944    to: 9050609    Orientation: Forward Links:  TAIR  MIPS    AGI:  At2g21080.1    Description:  similar to extracellular ligand-gated ion channel [Arabidopsis thaliana] (TAIR:AT3G20300.1); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G50630.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO43972.1) Range:  from: 9050780    to: 9052470    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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