Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                               <---------YAB1                         <---------AHL20(2)                        <---------ICU4                             <---------WRKY12  <---------ANAC58                       --------->ICU4                             --------->DOF5.7(2)<---------ANAC55(1)                     --------->YAB1                              --------->TOE1(3)   <---------ANAC46                     --------->AHL20(2)                          --------->TOE2(3)   <---------ANAC58                     <---------AHL20(1)            <---------AHL20(2)          <---------AHL20(1)                     <---------AHL20(2)            --------->AHL20(2)          --------->AHL20(1)   <                     <---------ICU4            <------ZmHOX2a(1) <-----------HVH21   --------->ANAC55(2)                     <--------ATHB1          <---------TOE2(3)  --------->ANAC46     <---------ANAC55(2)                    --------->ICU4         ---------->DOF2      --------->ANAC58   <-----------GT1<--                  --------->YAB1           --------->MYB52(1)   --------->ANAC58<---------ICU4   <---               --------->TOE2(3)        --------->YAB1 <---------ICU4   ----------->GT1    <---------AHL20(2) >AGL15        <----------DOF2    ----------->GT1 --------->AHL20(2)<---------DOF5.7(2)    --------->AHL20(2)   aaacatgaaaacataaactttaataatttttatgaatggtaaaaataaaggatttaatttttgcaaacgtcaacgagtaaaaatattacgtgtttaaatt  9030900                                                                                              -------                                                                                              -------                                                                                              <------                                                                                              <------                             --------->ARR14(2)                                               <------                             <---------GLK1(2)                                                -------                             <---------ARR14(2)                                               <------                        ------>MYB46(1)                                                      --------                       --------->MYB55(1)                                                    <-------     <---------HSFB2a(2)------>MYB83                                                         --------     --------->HSFB2a(2)--------->MYB52(1)                  <---------YAB1             --------->YAB1  <---------YAB1      <---------MYB46(2)          <------MYB83<---------ZAT14         <---------ATHB12 ---------ZAT6        <---------MYB59             <------MYB46(1)                     --------->MYB46(3) -------At5g28300     <---------MYB111(1)    <---------MYB46(3)                     --------->WOX13(1) --------GT1          --------->MYB46(3)   <XXXXXXXXXXXXXXXXXXXXMIR171A     ----------->GT1  <-------   tactgttatagaaacaaacttgtaccaaacggattcgaaatagatgtttgttcggtttgattactatacttcataaactggaaaatcaatcaccaataat  9031000    ---------->DOF2                              <---------AHL20(2) -->YAB1                                        --------->AHL20(2) -->ATHB12                              --------->ANAC55(1) --ATHB1                                --------->ANAC58 ------ATHB5                            --------->ANAC58 ---ICU4                                <---------ANAC55(2)                                       --- -->ATHB51                              --------->ANAC55(2)                                       <-- --HAHB4                         --------->REM1(1) --------->ARR11(3)                            ---- ->ICU4              ------>ZmHOX2a(2)  --------->ANAC46                                 <---------TOE2(3) --ATHB12           <------ZmHOX2a(2)  <---------LBD16  --------->ATHB12           <---------AHL20(2) ->AHL20(2)<---------YAB1        --------->bZIP60(2)   <---------YAB1              --------->AHL20(2) --ATHB51  --------->ICU4      ----------->RAV1(1) <---------ARR11(3)              --------->ICU4<---   tagagccaaagtcaagattgagatcgcatatagcaacatcacacggaatataaaatcttgattcgacaaacaaatatttcaagaaaaaattaagaaacca  9031100                                                                                 --------->TOE2(3)                                                                                --------->YAB1                                                                               --------->ICU4                                                                  --------->DEAR3(1)      --------->TOE2(3)                                           --------->TOE1(2)   ----------->RAV1(1)                                            --------->TOE2(2) ---->MYC3                             --------->CCA1(2)         --------->MYB46(3) -----MYC3                           --------->YAB1              --------->DEAR3(2) ----->O2                <----------DOF2             <------ZmHOX2a(1)------>NtERF2        ------>ZmHOX2a(2) ------O2---------->DOF2<---------DAG2--------->ARR11(1) ----------->GT1      <---------KAN4(2)------   tgtggcaacataaaagatgtgtctcaccttttgaacgaatgatacggacacaagaggaccagataaaaccgacgactgggaatcatcaattgatcgatcg  9031200                                                  --------->ANAC46                                              <---------GLK1(1)                                              <------ZmHOX2a(2)                                             --------->ARR11(3)                                             <---------ARR11(3)             <----------DOF2   <------                                            --------->GLK1(1)         <---------YAB1          <------     <-----------HVH21                      <---------GLK1(1)       --------->YAB1          *TSS    < >ZmHOX2a(2)  --------->MYB52(1)----------->GT1------>ZmHOX2a(2)   <---------YAB1    <---------ATHB12   ttttcgatgtccgagacaacggtttgagtctgagtagtaatatcagagatctcagccattgatggaactatgatgactctttctccaaacatgtttatgg  9031300                       <---------WRKY38(1)            --------->YAB1                       <---------WRKY45              --------->AHL20(2)                       <---------WRKY12        --------->ANAC58     <-----------TBP            <-----                      --------->WRKY18(1)      --------->ANAC58   <---------DAG2             --------     --------->At4g35610  --------->ZAT6  ------>ZmHOX2a(1)   --------->WRKY12              <-------- ---TOE2(3)  --------->TOE1(3)           <---------ANAC46---------->DOF2             <-------MYC3 ---TOE1(3)  --------->TOE2(3)  <----------DOF2--------->ANAC46   <----------DOF2    ------->MYC3 ---------At4g35610  <-----------HVH21   --------->TOE2(3)--------->DAG2         --------->ANAC46----   tttgctcatctaaaacctcaaatggtcaactctactttgtattccttataagcaaataataaagttgactttttatattctataccacatgttgatcata  9031400                                               --------->STY1(2)                                               <---------STY1(2)                                           <------ZmHOX2a(2)                                           --------->CCA1(2)                                          <---------AGP1                                          --------->AGP1---------->DOF2                                          <---------ARR11(3)           <-------TEIL                                          --------->ARR14(2)        <------MYB83                                          <---------ARR14(2)        <------MYB46(1)                                   ===============HOX2a_HOX2a      --------->MYB111(1)   <---------MYB52(2)              ================HOX2a_HOX2a     --------->MYB59         <--------- ----YAB1                          <------ZmHOX2a(1)   --------->AHL20(2)                <---------YAB1 ->YAB1                      ---------->DOF2------>ZmHOX2a(2)      --------->MYB46(2)   <---------ARR11(3) -YAB1                <-----------GT1     --------->ARR11(3)     <---------MYB52(1)  <----------DOF2 ------>DOF2         <-----------GT1  ---------->DOF2  <---------AHL20(2)     --------->WRKY12  <----   aaagaactaacatttgatatttttaaacccccaaagaggagaaagatctagctagaattaaagaatagttaggttcatagttgacttctttatctttgtg  9031500                                                          <---------YAB1                                                        --------->YAB1                                                       <---------YAB1                                                     --------->YAB1                                                     <--------HAHB4                                    --------->REM1(2)<---------ICU4                                   --------->ALFIN1 <---------YAB1                                  ------->MYC3      --------->ICU4                                  <-------MYC3    --------->TOE2(3)            --------->ATHB12        --------->ANAC58 <---------ANAC58         --------->YAB1              <---------YAB1        --------->ANAC46 <---------ANAC58       <---------TOE2(3)           <----------DOF2 -DOF2  --------->ANAC58 <---------ANAC55(2)    <---------TOE1(3)         --------->At4g35610       - -------HVH21            <---------ANAC46      <-----------GT1    --------->ANAC55(2)               <   tcacaaaaacaagacatggtttacattacttgaaaacgtgtagagcatttaacgataattatacttatatgtaatcagctttgattagagatgatacttc  9031600                                                                                                  <--                                                                                                  <--                                                                                                  ---                                                                                              -------                                     ------------------------>ANAC81                          <------                                   <---------TOE2(3)      ----------->GT1                     -------                           <---------At4g35610     --------->ANAC58                       <---------AHL20(2)        <---------WOX13(1)<---------TOE1(3)        --------->ANAC58                       --------->AHL20(2) -------->ZAT14     --------->ARR11(3)           --------->CCA1(2)            <---------ANAC46<------ ---------ZAT14     <---------ARR11(3)      ---------->DOF2  ------->TEIL     <---------ANAC55(2) ---   agaacacttgatttatgtataagatgttaagctaattaagatgaacaaaagataagcaaaatgtatatagttgtgttgttatgtgaatgagattaattaa  9031700           <---------TOE2(3)       <---------GLK1(2)    <---------TOE2(3)   ---------->DOF2  --------->AHL20(2)  <---------AHL20(2) -------AHL20(2)                                                              <---------ALFIN1 -------AHL20(1)                                                              --------->ANAC46 ------>AHL20(2)                                                             --------->MYB46(3) -->AHL20(1)                                                               --------->PCF2 ---AHL20(1)                       --------------->AGL15                 <---------At4g35610 -->AHL20(2)                       <---------------AGL15                 --------->At4g35610 ---AHL20(2)                       <----------DOF2                  --------->ZAT14             ----- ------>AHL20(1)           <---------ICU4 <---------------AtSPL8    <---------ZAT14          --------   ttaattaaagattgtggtagagaagctcataatgtttctttttagaggtactgtgtttgtattctctctctgttctgctcccaccatgtcttaacatgca  9031800  Previous    Next  AGI:  At2g21020.1    Description:  pseudogene, major intrinsic protein (MIP) family, contains Pfam profile: MIP PF00230; blastp match of 61% identity and 1.8e-40 P-value to PIR|S01444|S01444 nodulin-26 precursor - soybean Range:  from: 9029859    to: 9031292    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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