Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                      <                   <---------YAB1                                                                   -                 <------ZmHOX2a(1)                                                          ---------               <---------TOE2(3)                                                           <-------TEIL       <-------GAMYB                                                         <---------ALFIN1      <-      <---------MYB46(3)                    <---------ALFIN1          ----------->HVH21  <---------ARR14(2) -----ZAT6<------MYB46(1)          --------->YAB1             --------->ANAC58           --------->ARR14(2) ---ANAC46<------MYB83    <---------WRKY38(1)                 --------->ANAC58     --------->ALFIN1<-   gtttttggcgattggtttaggattatagtcaatgcaatcttgaacaacacttctgaagtcagacaagtcagagtgacccctacgcttgggggattcatca  9020600           ------>ZmHOX2a(1)       --------->ARR11(3)      --------->GLK1(1)     --------->ARR11(3)                     <---------KAN4(1)     <---------ARR11(3)                     --------->KAN4(1) <---------MYB52(1)                 <------ZmHOX2a(1) -----------HVH21                  <----------ID1                               --------->GLK1(2) -------->LBD16                   <---------TOE2(3)           --------->ANAC58 <---------GLK1(2) >YAB1<---------GLK1(1)       <----------DOF2      <---------At4g35610  <----------DOF2 --------ANAC58      <---------MYB52(1) --------->ANAC58      --------->ANAC58 --------->ARR14(2) --------ANAC58      --------->DOF5.7(2)--------->ANAC58    ---------->DOF2    <---------ARR14(2) ---   tccgtgagatatcctgcacaaacgttacctcgcattaaggacaagaacaatccaactgagagaaaagcatcaaactttacagattcttgagcgaattaga  9020700                  <------ZmHOX2a(2)                 <---------ARR11(3)                 --------->AGP1              <---------ALFIN1               --------->ANAC46            ------>NtERF2                    <---------ANAC55(2)            ----------->RAV1(1)              --------->ANAC55(2)           --------->RAP2.3(3)               --------->ANAC58           --------->DEAR3(1)          ------>ZmHOX2a(2)          --------->ATERF1(1)         <------ZmHOX2a(2)                         <---------GLK1(2)         <---------ATERF1(1)         <---------ARR11(3)                         --------->ARR14(2)         ------>NtERF2               --------->AGP1                        --------->ARR14(2)        --------->ANAC58             <---------AGP1   <---------WOX13(1)   <---------ARR14(2)       -        --------->ANAC58             --------->ARR11(3)    ------>ZmHOX2a(2)    <---------ARR14(2)<--        --------->ANAC46       --------->YAB1--------->ANAC58          <-------TEIL  <<<<<<<<<<<<<<<< -------->GT1<------NtERF2    <---------ATHB12      --------->ATHB12  --------->AtLEC2 <---------ALFIN1   tggaaacaagacgcccccagatcaatattcgaatcataagatctattacgcaagtgattgatcgaatcagagatgcaaatcggaatcgcacactggattt  9020800                                                   --------->At4g35610                                                   <---------At4g35610       <---------HSFC1(1)                                                  ----------->RAV1(1)        --------->HSFC1(1)                                                  ==========================RAV                                                --------->At4g35610          --------->HSFB2a(2)                                                --------->ZAT18              <---------HSFB2a(2)                                                <---------ZAT14         <---------HSFB2a(1)  --------->ANAC58                              <-------TEIL            <---------HSFC1(2)  ----------->GT1                              --------->ALFIN1         --------->HSFC1(2)  --------->ANAC58                          --------->LBD16           <------ZmHOX2a(1) --------->DOF2                     <-----------ARR10              <------ZmHOX2a(1)    --------->YAB1 -------TOE2(3)         --------->DAG2    <---------LBD16 <------ZmHOX2a(1) <---------ANAC46 <LFY                  ---------->DOF2   --------->MYB52(1)     <-----------RAV1(2)   --------->ARR14(2)   aagaaagcaaaaaacaaaaccctacaaaagtgagagagaaactcaccgggtgcagcagaaggagaaccaggaggagtttcgagaaccctatcgtcaagag  9020900                 ------>ZmHOX2a(1)               ------>ZmHOX2a(2)              <------ZmHOX2a(2)             <---------ARR14(3)             --------->ARR14(3)             --------->ARR14(2)                                                              <------NtERF2             <---------ARR14(2)                                                      <---------O2             --------->AGP1                                                          <---------ANAC58             <---------ARR11(3)                                                      <---------ANAC58             --------->ARR11(3)                  <------ZmHOX2a(2)                   <---------ANAC46             <---------GLK1(2)                  --------->ARR14(2)               --------->ARR11(3)  --------->ANAC58                  <-----------GT1                     --------->ANAC46<---------DEAR3(1)  --------->ANAC58     ---------->ID1       <-----------GT1 --------->AtLEC2     <---------ARR11(3)   acagaagcaattcaagatcctcttggtcgttttccatttttcaatttcacgatccaatagcgatgcacaagaacacaaaacaacatctcgtgggcgggag  9021000                     --------->ANAC58                  --------->ARR14(2)                  <---------ARR14(2)                --------->DEAR3(1)               <------NtERF2               --------->RAP2.3(1)       <-------GAMYB              --------->LBD16           <---------ANAC58                            --------->MYB52(2)              ------>NtERF2       <------NtERF2                                     <---------ANAC46              <------NtERF2      ------>NtERF2                                    <---------ARR14(2)             --------->ANAC46   --------->DEAR3(1)                           <---------At5g28300            *TSS--------->RAP2.6(2)     <---------ANAC46                    <-----------GT1   <------           <---------ANAC58     <---------DEAR3(1)                <---------ALFIN1--------->ARR14(2)           <---------ANAC58    --------->ATERF1(1)   <---------AHL20(2)--------->LBD16        -------         --------->WRKY38(1)  <---------ATERF1(1) --------->AHL20(2) <---------LBD16<---------ANAC58         --------->WRKY12    ----------->HVH21    <---------AHL20(2)------>MYB46(1) <---------ANAC58       <-------GAMYB --------->ANAC58<---------MYB52(1)<---------TOE2(3)  <----------DOF2 ---------->DOF2      <---------ANAC58     --------->ANAC46      --------->AHL20(2) ------>MYB83 <---------MYB52(1)<-      <---------ANAC58   ---------->DOF2<---------ANAC58          --------->AtMYB61<-------TEIL<-----   actgaatttcgttgcccgccgaaacgcataagcgacgccgtttcgttgttaataaataatgtttcataccacccggttttaccggttcgtgagaaagatc  9021100                                                                                                    <                                                                                                    <                                                                                                    <                                                                                                    <                                      --------->ETT(1)                                              <  ----------->GT1         ----------->TGA1                                                      <----  <------MYB83            ----------->HVH21                                                     <----  <------MYB46(1)        <---------WOX13(1)                                                <---------At4g35610 ---ARR11(3)            <---------ANAC58 <---------AtLEC2                        <---------AHL20(2) < -->ARR11(3)   --------->LBD16       --------->RAP2.6(3)                         --------->AHL20(1) < -----ZmHOX2a(1)        <---------ANAC58<------NtERF2     ---------->ID1         --------->AHL20(2) - -ZmHOX2a(2) <---------LBD16 <---------YAB1       <---------AHL20(2)      ----------->GT1  --------->At4g35610   aggatggtgaaataaaccggaaatttgagtgacgatagtgtcggcatggcatttttttttgtctcttaacgagagagagtaaataaaatagtcagatgtc  9021200                                                                       <---------ICU4               -------->P                                   <---------ZAT2              ------->GAMYB                                 ----------->RAV1(2)       --------->WOX13(1)                                   <---------At4g35610     --------->PCF5                                         --------->At4g35610  --------->ALFIN1                      --------->MYB46(3)  --------->ZAT2 ---------bZIP60(2)         <---------ICU4                  <---------O2 ---------ANAC58 ------->GAMYB<---------WOX13(1)  --------->DAG2       --------->ATHB12 ---------ANAC55(2)        --------->ICU4        ---------->DOF2       --------->YAB1 ---------ANAC58 --------->AtMYB61     ------>MYB83  --------->ALFIN1 <---------ATHB12 ---------ANAC46--------->MYB46(3)   --------->AtMYB61      --------->O2 -----ANAC58 <---------MYB111(2)    --------->MYB46(3)      --------->TGA1a -----ANAC58 <---------MYB55(2)     <---------MYB52(2)     ------>NtERF2 ---------O2 --------->MYB46(3)    ------>NtERF2 =====================bZIP_DOF           --------->TOE1(2) ---------ANAC55(1)    --------->ZAT18 ------>MYB46(1)--------->ZAT18 --------->ICU4     --------->TOE2(2) -------->ANAC55(2)    <---------ZAT18----------->RAV1(1) <---------ALFIN1           --------->YAB1   ttacgtggtccatcaacaaccacagggccctaattgccaccaacatccacttaaagtgtgccacctgtcttaatcatgggcttcttatcaacatgcgatg  9021300                                   <-----------GT1                               --------->ATHB51                               <---------ICU4                               --------->YAB1                               <--------HAHB4                <---------HSFB2a(2)                               <--------ATHB1       --------->YAB1                        <----------DOF2         <---------------AGL15               -------->P     --------->AHL20(2)--------------->AGL15         --------->AHL20(2)              <-----------GT1 <---------ATHB51 ----------------->AGL3         <---------AHL20(2)         <---------ARR11(3)   --------->ICU4 --------->ZAT18 --------->HSFB2a(2)          <---------ANAC46         --------->ARR11(3)   <---------ATHB12 ----------------->AGL2         --------->YAB1   gcccaatataagatacttacccttctctttcaataattatccaaatgtgcccaaatatagtttttagaacaaatgaacaattatatatgttttcgtaaac  9021400                                                                                           --------->AHL20(1)                                                                                           <---------AHL20(1)                                                                                        <---------AHL20(2)                                                                                        --------->AHL20(2)                          --------->ANAC58                                             <---------AHL20(1)                          --------->ANAC55(2)                                          <---------AHL20(2)                          --------->ANAC55(1)                                          --------->AHL20(2)                          <---------ANAC55(2)                                      --------->AHL20(2)                          --------->ANAC46                                         <---------AHL20(2)                          ----------->GT1                                  --------->ARR11(3)                          --------->ANAC58                                 <---------ARR11(3)                         <-------TEIL                                    <---------TOE2(3) --------->AHL20(2)                       --------->ARR14(2)                                ----------->ARR10 <---------AHL20(2)                       <---------ARR14(2)  <---------TOE2(3)     --------->DAG2  --------->TOE2(3)            <----------DOF2--------->TOE2(3)   ------->TEIL     ---------->DOF2<---------YAB1  ------            --------------------->WRI1 --------->YAB1       <---------YAB1 <---------GLK1(2)  <------   aaaatactaattttctttgaaaacatatacgtaaatttcaatattgatgtatgtagaaagttatgaaaaaggaataagattttcattaattaatttatta  9021500  Previous    Next  AGI:  At2g20980.1    Description:  MCM10. similar to unnamed protein product [Vitis vinifera] (GB:CAO47378.1); contains InterPro domain Zinc finger, Mcm10/DnaG-type (InterPro:IPR015408) Range:  from: 9018470    to: 9021012    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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