Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                <------         <---------At4g35610             <----------DOF2                --------->ANAC58    <--------  ---------->DOF2                <---------ICU4           <------ZmHOX2a(1)---------->DOF2 ---------- ------->RAV1(1)          <---------KAN4(2)      --------->ZAT14        --------->ANAC58  --------->ZAT14 ---->MYB46(3)            ---------->TaMYB80     <---------ZAT14   --------->ANAC58       <---------ZAT14 ---->RAV1(1)      --------->ALFIN1 <-----------GT1 --------->ZAT6 --------->ANAC58    <---------ANAC46 >LBD16  --------->At4g35610    --------->ICU4   --------->ZAT18   --------->ANAC46  <---------ZAT14   aacacaaagtcatcagagagagtgagggaatgtgcttattacactttgtagttcacagtaggatagagcaagccaagaaaagcctcgttcagtgttgtac  9008400      <---------LBD16  <---------DAG2  <----------DOF2   --------->ZAT14                    --------->ARR14(2) -----GT1      --------->ZAT18                         <---------ARR14(2) -REM1(1)      --------->ZAT14             --------->YAB1                                          -- ----->AtSPL8  <---------ZAT14          --------->TOE2(3)                 ---------->DOF2     -------   cagactttttcggattgttcactgaagaaacagactaaaccacattaataagatgaagaaatgcagagcaaaaaccaaaaggagattggattggattgga  9008500                                                                           ----------->HVH21                                                                           <---------MYB52(1)                                                                          --------->LBD16                                                                         <---------ANAC46                                                                         <---------ANAC58                                                    <---------ANAC58     <---------ANAC58          <-                                                    --------------------->WRI1                     --                     --------->bZIP60(1)       --------->ALFIN1     <---------At4g35610          <---   <------ZmHOX2a(1) <---------bZIP60(1)     <---------ANAC46     <-----------bZIP910(2)   --------->DAG2 -------->DOF2    ----------->HVH21<---------ATHB12 <---------ANAC58--------->At4g35610   ---------->DOF2 ---->GT1     <---------------------WRI1    --------->ALFIN1    <-----------TGA1 <----------DOF2 ----   taaaaggacctcgctcttcgatgacatcaagggagcaatgaacaatgtggtggagcttgagagcatcgtcagcatccgtgaagctttgtatgtaaagcgg  9008600                                                                                                   --                                                                                               <-----                                                                                               <-----                                                   ------>MYB46(1)                             ------                                                   ------>MYB83                               -------                                            --------->SPL7                                    ------>NtERF2          <-----------GT1                 --------->At5g28300               <---------LBD16  --------      <---------MYB52(1)                 ----------->GT1                <---------GLK1(2)   <-------- --------KAN4(1)                      --------->MYB52(1)       <------ZmHOX2a(2)            --------- ------->KAN4(1)                     <---------ARR14(2)      <---------At4g35610            <-------- ------ARR14(2)                --------->ANAC46  <---------MYB59  <---------YAB1           <--------- ----->ARR14(2)<------ZmHOX2a(2)     --------->ARR14(2)      --------->At4g35610  ----------->GT1  <-   attgttctgttatttcgatccatagggaagttcaagtcagaaacggtaagacctaatgaaatcagatcacaatagaaactcggaatgtaaattctgcggc  9008700                     --------->ANAC58                     --------->ANAC58                   ------>NtERF2                   <---------ATERF1(1)                  --------->DEAR3(1)                  <---------DEAR3(1)                 --------->ATERF1(1)                       <---------HSFB2a(2)                ------>NtERF2                           <---------ARR14(2)                <---------RAP2.3(1)                     --------->GLK1(2)                <---------ATERF1(1)                     <---------ARR11(1)             ------>NtERF2                              --------->ARR14(2)            ----------->HVH21                           ------->TEIL            --------->DEAR3(1)                         <---------CCA1(2)           <------NtERF2                               <---------GLK1(2)          <---------ATERF1(1)                          <---------ARR14(1)         --------->DEAR3(1)                       ------>ZmHOX2a(2)        --------->DEAR3(2)                       --------->GLK1(1)       <------NtERF2<------NtERF2                <---------GLK1(1) ------->ARR14(2)--------->RAP2.3(1)             <------ZmHOX2a(2) -NtERF2--------->ATERF1(1)                     <---------AGP1 ----At4g35610 <---------DEAR3(1)               <---------ARR14(3) --->At4g35610--------->ATERF1(1)               <---------ARR14(2) ---->RAV1(1)<---------ATERF1(1)                <-----------ARR10 ->ANAC46----------->HVH21                      --------->ARR14(3) -LBD16<---------ATERF1(1)                      --------->ARR11(3)                              ----- >At4g35610--------->ATERF1(1)                  --------->ARR14(2)                  --------->ARR14(2) -At4g35610--------->SPL7                       <---------ARR11(3)    <---------AHL20(2)       <----- --RAV1(1)------>NtERF2        --------->YAB1  <---------CCA1(2)      --------->AHL20(2)      <------ --------ARR14(2)<------NtERF2<------ZmHOX2a(2)<---------At4g35610----------->GT1   <---------ARR14(2)   agacctggtggccgacgacggcgacgcaaacgatcatcttctcccttgcagatctccgaatctcgaaactgataaatttttccgacgattcacttcagat  9008800                                                           <------------CBF                                                         <---------YAB1                        <-----                                                       --------->YAB1                    <----------DOF2                                                      <---------ATHB12                   --------->TOE1(3)          --------->HSFB2a(2)                     <---------YAB1 <----------DOF2         --------->TOE2(3)         --------->REM1(2)                        ------------>CBF                   ================ ---->GLK1(2)                                   --------->YAB1  <---------ANAC58     ------>ZmHOX2a(1) ----GLK1(2)                 <----------DOF2   <---------YAB1   <---------ANAC58    <---------MYB59 ---At4g35610     *TSS   <------NtERF2     <----------DOF2--------->ATHB12         --------->YAB1   tccaaaaaccgtctagactcaagagtcgtcgttttatgggctgggctttattatcaataactattggctttttagtcacatgtaatcctaactttaatat  9008900                           <---------------AGL15                          ==========================================MADS_MADS                          <-----------------AGL1                          <-----------------AGL2                          <-----------------AGL3                        <-----------GT1                    ------>ZmHOX2a(1)                   --------->TOE2(3)               <---------GLK1(1)                              <---------At4g35610            --------->LBD16<----------DOF2                    --------->At4g35610           --------->HSFB2a(2)                     <---------MYB59          ------>ZmHOX2a(2)--------------->AGL15   --------------->AGL15          =================HOX2a_HOX2a  <-------TEIL    <---------AHL20(2)          ================================HOX2a_HOX2a   --------->AHL20(2)       --------->ANAC58 ----AHL20(1)  --------->GLK1(1)   <------ZmHOX2a(1)------>ZmHOX2a(1)            --------->ANAC58 ================HOX2a_HOX2a      <----------ID1  ----------------->AG ----------->RAV1(1)   --------   gtttcaaactgatcccgaattccttatttctttataaggacatacactaatttcctaatttatcagatgtccccaacatagacaagtacttggtatcatg  9009000                                           --------->AtLEC2                                        ------>MYB46(1)                                        ------>MYB83                                        -------->P                                      ------->GAMYB                                      --------->DEAR3(1)                                     --------->DEAR3(2)             --------->ANAC46        --------->MYB46(3)             --------->ANAC58      <-----------GT1                     --------->LBD16             --------->ANAC58   --------->ANAC46                       ----------------->AGL3        --------->At4g35610     --------->ANAC55(2)                --------->ARR14(2)              --     <-------TEIL  <----------DOF2 --------->MYB52(1)              <---------ARR14(2)              <- ->YAB1 <---------At4g35610   <-----------GT1                     <---------GLK1(1)  --------->ARR11(3)   tcaaaaattcatctcaagctactttcattttttcacttaaccgacctgcaaaatgtttttttgtctgcaaatccccaaatacagagacatcttgtgaaga  9009100                      ---------->DOF2            <---------WOX13(1)                                         <------ZmHOX2a(1)          --------->ATHB12                                        <---------AHL20(2)          --------->YAB1        <-----------------AGL1           --------->YAB1         --------->ZAT14         <---------YAB1    <-------TEIL                         <---------YAB1          <---------ZAT14 ------->ICU4      ----------->GT1                           --------->ICU4         --------->ZAT6 --------ATHB12--------->ARR11(3)       ----------->GT1     <---------MYB59<---------At4g35610   aatcatggagaatgatagataatgtaaagtccatttcaatattggtaaattctaaattcagaccttattataaggagagatgatcaacactatagtctga  9009200                                                                          --------->ANAC58                                                                          --------->ANAC58              <---------ARR11(3)                                      --------->ANAC58              --------->ARR11(3)       <---------ICU4                 --------->ANAC58    -----------        --------->ZAT6       ------>ZmHOX2a(1)              --------->MYB46(3) --------->MYB46(3)   aatacctctaacacaatatctcattctcttcctattaagaagcattacattcgaaattacgaacaaacaaaaacgcatggaaccaatacagatggtgaga  9009300  Previous    Next  AGI:  At2g20930.1    Description:  similar to unknown [Populus trichocarpa] (GB:ABK93191.1); contains InterPro domain Longin-like; (InterPro:IPR011012); contains InterPro domain Sedlin; (InterPro:IPR006722) Range:  from: 9007697    to: 9008818    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At2g20940.1    Description:  similar to unknown [Populus trichocarpa] (GB:ABK95988.1); contains InterPro domain Protein of unknown function DUF1279 (InterPro:IPR009688) Range:  from: 9009113    to: 9009782    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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