Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                            --------->AHL20(2)                                                                             --------->ANAC46                                                                           <-----------GT1--------->YAB1                 <---------MYB52(1)                                   <---------TOE2(3)  <---------YAB1                <-------GAMYB                                        <-----------GT1     <---------ATHB51         <---------ATHB51                                       <---------YAB1       xxxxxxxxxxxxxxxx         --------->ICU4           <---------YAB1<---------ICU4 --------->AHL20(2)   --------->ANAC58 -----TEIL      <---------At4g35610        <-----------GT1     <---------AHL20(2)   --------->ANAC58   ttcattctacaattatgcagttgtttctaatacagtatgcttatttttcagtattactcatagattaaaattaacatttacctcacaaacaattatagaa  9005400                                                 --------->AHL20(2)         ----------->GT1                        <---------AHL20(2)         ----------->HVH21      <--        --------->AtLEC2                     --------->AHL20(2)     <-----------GT1               --- ---------->DOF2  --------->AHL20(2)        --------->AHL20(2)     --------->RVE1(1)              --- xxxxx>smallRNA(si3)     ---------->DOF2    <---------AHL20(2)     --------->CCA1(1)              <--   atagaaagacatggaaaaaaaaaaatagaaagacatggaccacaaaataaataatatgtcgaaaacaaaatatccatttgacatacttatcaaatatcaa  9005500            <-------TEIL               --------->AHL20(2)           --------->CCA1(2)           --------->AHL20(1)       --------->ANAC58    <---------YAB1           <---------------AtSPL8             --------->ANAC46  --------->YAB1             --------------->AtSPL8             --------->ANAC58 <---------YAB1---------->DOF2         <---------AHL20(2)     <---------ALFIN1 -------AHL20(2)          <---------REM1(1)               <---------ANAC58 ------>AHL20(2)         <---------TOE2(3)           <----------DOF2 ------>AHL20(1)      <---------WOX13(1)         --------->ARR14(2) -------AHL20(1) --------->YAB1       --------->AHL20(2)  <---------ANAC58  <---------ANAC46<--------   tttattatcaaagattcaaaagtaattgatgtaagtacaaaaaaattgccgaattcttttgcttccacgcttcgaattgtgtattggacccaaatttatg  9005600                                                                           --------->SPL7                                                                           >>>>>>>>>SPL1                                                                           ------------>CBF                                                                           >>>>>>>>>SPL5                                                                     --------->ANAC58                                                                     --------->ANAC58                                         --------->LBD16             --------->ANAC46                                         ------>NtERF2               ------------------>SPL14                                         <------NtERF2        --------------->AtSPL3                                       --------->SPL7    ------>NtERF2 --------------->AtSPL8                 <---------MYB52(1)  <-----------HVH21  <---------ANAC46 <---------SPL7                --------->TOE2(3)    <---------SPL7    --------->RAP2.6(3) >>>>>>>>>SPL4          <---------ARR11(3)      <---------At5g28300 --------->MYB52(1)--------->RAP2.6(2) ----------->HVH21                -------->P         ----------->HVH21 --------------->AtSPL3-------- -AHL20(2)--------->ARR11(3)     <-----------GT1 --------->WOX13(1)---------->DOF2    ------------>CBF   tgtgtgacacaagataatcgttagtataggtctatctaccgtccgccgtttcaatctgacggctatcgtacaagccgtacaatatagactcaatctaacg  9005700                                                                                              -------                                                                   *TSS  --------------->AtSPL3                                                                  <---------MYB46(3)        ------>MYB83             --------->YAB1                                       <------MYB83              ------>MYB46(1)            <------ZmHOX2a(2)                                     <------MYB46(1)          --------->MYB52(1)           <---------ARR11(3)           --------->TOE2(3)        <---------AtMYB61         ----------       ---------->DOF2    <---------CCA1(2)                   <-----------RAV1(1)   --------->MYB46(3) ->MYB52(1)--------->ARR11(3)       <---------MYB52(1) <xxxxxxxxxxxxxxxxxsmallRNA(si3)    --------->AtMYB61   gtggaaatagaaagatcataaatccctcaaatctcacagttacctcaagtttttttttttttttttgttggtggagacgaacaacaacaacaccaacaga  9005800                                        --------->DEAR3(2)                                        <---------MYB55(2)                                        --------->MYB46(3)                                       -------->P                                       ------>MYB46(1)                                      --------->MYB52(1)                                      ------>MYB46(1)                                      ------>MYB83                                    <---------MYB55(2)                                   --------->ANAC46                              --------->ATERF1(1)                             <---------SPL7                             --------->ABI4(1)                            --------->RAP2.3(2)                            --------->DREB2C(2)                            --------->RAP2.3(3)                            <---------ATERF1(2)                            --------->ATERF1(2)                            --------->DEAR3(1)                            <---------ALFIN1                            --------->RRTF1(2)                           --------->RAP2.3(1)                           --------->ORA47(2)                           --------->RRTF1(1)                           --------->ERF1------->GAMYB                           --------->DEAR4(2)                           --------->ATERF1(1)                          <---------At4g35610                          --------->At4g35610                          --------->ABI4(1)                          ------>NtERF2------>MYB83                                              <---                          <---------ATERF1(1)                                                    ----                         --------->DEAR3(1)                                                     -----                         --------->ANAC46--------->DEAR3(1)                                     -----                 --------->At4g35610<---------MYB59  --------->At4g35610                        -----                 --------->ZAT2  <---------ALFIN1    <---------At4g35610            <---------ARR11(3)                 <---------ZAT2--------->SPL7   <---------At4g35610                 --------->ARR11(3)                 <---------At4g35610--------->MYB46(3)  <---------ATERF1(1)        <---------CCA1(2)              --------->LBD16------>NtERF2  <----------DOF2                  --------->DEAR3(1) -----             --------->ANAC46<---------ATERF1(1)--------->At4g35610       <---------ALFIN1  ------>MYB83             ------->GAMYB--------->LBD16--------->RAP2.6(2)           --------->ANAC46     ------>MYB46(1) >GAMYB     <------------AtMYB77----------->HVH21  ---------->CDC5    ------>ZmHOX2a(1)   <---------MYB111(1) ->RAV1(1)  --------->MYB46(3)<------NtERF2 <---------DAG2 ------>ZmHOX2a(1)--------->ANAC46-------->P   agacagaaatggcaaccgcagctctctccgccgcccgacccaaccgccttagctcagcctcctccgatgttcctctccaccccctatatctccctaccaa  9005900                                                                    <---------ZAT18                                                                <---------DEAR3(1)                                                               <------NtERF2                                                               --------->ATERF1(1)                                        --------->LBD16       <---------RAP2.3(1)                                        <------NtERF2         ------>NtERF2                                        ------>NtERF2         <---------DEAR4(2)                                     ------>NtERF2            <---------ERF1                                     <---------ATERF1(1)      <---------ORA47(2)                                     --------->LBD16          <---------ATERF1(1)                            <---------DEAR3(1)               <---------RAP2.3(2)                  <--                            --------->ALFIN1                 <---------RAP2.3(3)                 ----                          <-----------RAV1(1)                <---------DEAR3(1)                 -----                          --------->ALFIN1                   --------->DEAR3(1)                 -----                        <---------At4g35610                  <---------ANAC46                   -----                        <---------ZAT2 --------->RAP2.6(2) <---------ATERF1(1)                  -----                        --------->ZAT2 --------->DEAR3(1) --------->TGA1a                       -----                        ----------->RAV1(2)               <---------TGA1a                       -----                        --------->At4g35610               --------->O2                         ------                      <-----------RAV1(2)   --------->GLK1(2)<---------RRTF1(3)                ------                      ================RAV  <---------GLK1(2)<---------ABI4(1)                  ------ ------ZAT2     --------->SPL7      <---------ALFIN1      --------->ANAC58                     ------ ----->ZAT2   --------->LBD16       --------->DEAR3(1)    --------->ANAC58       <---------ZAT6------ ---->ANAC58 --------->ANAC55(2)    --------->ANAC46      --------->ANAC46 --------->LBD16     ------ ---->ANAC58 --------->ANAC46     <---------ATERF1(1)   <---------ALFIN1   ------>NtERF2       <----- ->MYB46(1) --------->HSFB2a(2)<---------ANAC58       <---------ALFIN1    --------->DEAR3(1)  ------>NtERF2 ->MYB83    <---------HSFB2a(2)<---------ANAC58      --------->MYB46(3) <---------ATERF1(1)   <------   gctccaatttccttcccgtaagactcagctgtggcgctccgccgcgattctcttacccacacggcggcgatgcgctccgcctagagctagttctcgcgcc  9006000       <---------ALFIN1    <-----------GT1 <---------ARR14(2) --------->ARR14(2) <---------GLK1(2) ----NtERF2                                   --------->HSFB2a(2) -->NtERF2                                <---------GLK1(2) ---->DEAR3(1)                          <---------TOE2(3) ---->DREB2C(2)                         <---------TOE1(3) ------>HVH21                        <----------DOF2           --------->ZAT2 ---->RAP2.3(3)                    ------>NtERF2               --------->At4g35610 ---->At1g77200                  <------NtERF2<---------LBD16  --------->HSFC1(2) ---->RAP2.3(2)                 <---------ATERF1(1)            <---------At4g35610 --->ORA47(2)                   <---------RAP2.3(1)            <---------HSFB2a(1) --->RRTF1(1)                   <---------ORA47(2)             <---------HSFC1(2) --->ERF1                       <---------DEAR4(2)             --------->HSFB2a(1)                 <- --->RAP2.3(1)                 <---------RAP2.3(2)           <------ZmHOX2a(1)             --------->ANAC58 --->DEAR3(2)                  <---------RAP2.3(3)       --------->LBD16                xxxxxxxxxxxxx --->ATERF1(1)                 <---------DEAR3(1)   --------->ATERF1(1)             <---------ANAC58= -NtERF2                      --------->ATERF1(1)  <---------ATERF1(1)              <---------ANAC58< ---ATERF1(1)             --------->REM1(2)   <---------HSFB2a(2)         --------->ANAC46 --------->ANAC58   gacgattctccacccttcgatatgtctgtggagacggcgcttaaggttctcggagtctccgaaggagcttccttcgacgaaattcttcgtgccaagaaat  9006100                                        <---------At4g35610                                        --------->O2                                        <---------ZAT2                                        --------->ANAC55(2)                                        <---------O2                                        --------->ZAT2                                        --------->At4g35610                                        <---------TGA1a                                 <---------CCA1(2)          --------->HSFB2a(2)------->GAMYB          <---------HSFB2a(2)=====================MYC_MYB                   --------->ARR14(2)      <---------ANAC58      --------->ANAC46                          --------->YAB1      <---------ANAC58      --------->ANAC58                         <---------ATHB12   ------>ZmHOX2a(1)        --------->ANAC58                         --------->MYB46(3) --------ARR14(2)         <---------ALFIN1----------->HVH21         --------->ANAC46 xxxxx>smallRNA(se3)<---------ATERF1(1) --------->TGA1a            --------->WOX13(1)  <-----------GT1 =======================HOX2a_HOX2a   <-------------DYT1   <-----------GT1  <---------ARR14(2)      - ------ZmHOX2a(2)<------ZmHOX2a(1)    <-----------RAV1(2)<-----------GT1    <---------GLK1(2)     ---   cgatcctggcttctcgtaaggacgaccccaacgccatctctcaggtgactgttttcaattttcactctccaatcaacaaattcgctaattttctatattt  9006200                    <---------AtLEC2               <---------At4g35610               --------->At4g35610          <---------ZAT6       --------------->AGL15 --------------->AGL15                                                                ----------->HVH21 <---------------AGL15   ---------->DOF2<---------ANAC58   --------->At5g28300   <------NtERF2 ------ ---------------->AGL2--------->AtLEC2  <---------ANAC58--------------------->WRI1  <---------At4g35610 ------->ID1 <-----------GT1         <----------DOF2   <---------ALFIN1  <----------CDC5       <-----   gttccattactagttttagcttccatggaaagagatagactttcttgttcttaagcctcactgtaattttctcaggctgaggctgcatatgacatgctgc  9006300  Previous    Next  AGI:  At2g20920.1    Description:  similar to unnamed protein product [Vitis vinifera] (GB:CAO47410.1) Range:  from: 9005767    to: 9007013    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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