Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                      --------->ATHB12                                                                 <---------ANAC58                                                                 <---------ANAC58                  <-                                                               <-----------GT1                     <-      --------->ALFIN1                                  <---------ICU4                             --    <---------ANAC58                    --------->GLK1(2)   <---------AHL20(2)     ------->TEIL   <--    <---------ANAC46    <---------At4g35610            <---------YAB1           <---------YAB1  -----    <---------ANAC58    --------->At4g35610          --------->AtMYB61  ----------->GT1       -------   <---------MYB46(3)---------->ID1    <---------GLK1(2)<--------HAHB4 ------>ZmHOX2a(2)    ---------   ttttttgggtggagacagtttttgtcatcttccacattttagattctattttcgaccatcatttttttcttgatcggtgactatgaatctaatggggtca  8994300 -------HAHB4 --------ICU4                   <---------------AtSPL3 ------->YAB1                   --------------->AtSPL8 -------ATHB12             <------MYB46(1) ---->WOX13(1)             <------MYB83 -->WRKY18(1)           ----------------------->TaNAC69(2)                                     <----- -->GT1             --------->ANAC55(2)    <---------ICU4      ---------->DOF2             <---------   atcattttcacatataaaacttaagtatttggtgtttgtacttcatcagttcatcttattccatagaaagagagtgagaagtgatcaataacccttttaa  8994400                               --------->ARR11(3)                               <---------ARR11(3)                             <---------TOE2(3)                      --------->TOE2(3)                      <---------MYB59               <------ZmHOX2a(2)                                     <---------------------WRI1    ---------->DOF2   --------->TOE1(3)                     --------->ANAC58 ------GT1    <---------ARR11(3)       <-------TEIL         --------->ANAC58            --------->MYB52(1) -DOF2        --------->ARR11(3)--------->CCA1(2)       --------->ANAC46      <------ZmHOX2a(2)   <--   ctgaaaaaaagaagaagatcaaaacctaaataagatttaagtacatatgtctaattcgacgtaagacatttttggaaacgatcaatgtactaacgagttg  8994500        ------->TEIL   --------->At4g35610                                                                            ---   <---------At4g35610                                                       ------->TEIL         <--  <---------YAB1               <----------DOF2      <---------ICU4           <-------TEIL --------->At4g35610 -------GLK1(1)         --------->MYB52(1)       --------->YAB1    ----------->RAV1(1)   <-----------RAV1(1)   aattctgatgaatcttgagcatgaataaacggactttgtagtttgtacaattgataatgaaacagagagcaacattatgtacatgtgatatatgctgcat  8994600                                                                                               ------                                                                                           --------->ZAT6                                                                                       <-----------HVH21                                                                                     ------->MYC3                                                                                     ------->MYC4>>>>                                                                                     <-------MYC2----                                                                                     -------->ABF1<--                                                                                     <-------MYC3>>>>                                                                                     ------->MYC2>>>>                                                                                     <-------MYC4>>>>                                                                 <---------O2       <---------ANAC55(2)                                                                 <---------bZIP60(2)=================                                                                 <---------ANAC58   <---------O2 >>>>                                                                 <---------ANAC46   <---------TGA1a                                                               --------->MYB52(1)   <--------ABF1----                                                              ------>ZmHOX2a(1)     --------->O2 ----         <----------DOF2   --------->ZAT2              <---------MYB59              --------->TGA1a ------>AHL20(2)           <---------ZAT2     --------->AHL20(2) <---------ANAC58   --------->ANAC55(2) -------AHL20(2)      ------->TEIL        ---------->DOF2   --------->YAB1     ----------->HVH21-----   ttatttatgggcttttattagatggaccgagctctagcaaaatccaaagtaaatgggcctaatcctaacgtggacagacaagggacacgtgtcacactac  8994700      ----------------------->TaNAC69(2)                      <---------ICU4     <---------ANAC46                               --------->MYB46(3) --->MYB52(1)                                      ------>MYB83 >>>>>>DREB1C                                      -------->P --------->YAB1 --->GAMYB                                     <------ZmHOX2a(2) -------DDF1                                   ==============================HOX2a_HOX2a >>>>>>DREB1B                                  *TSS------>MYB46(1) >>>>>>DREB2A                                  --------->CCA1(2) >>>>>>AtTINY2                                --------->ARR11(3) ====MYC_MYB                                  <---------ARR11(3)                     <---------ANAC55(2) >>>>>>DREB1A               ---------->DOF2   --------->ARR14(2)       >>>>>>>>>>>>>>>>>LFY        <- ----->At1g77200   --------->ANAC58           <-----------ARR10       ------>ZmHOX2a(1)          <--- ----->DREB2C(2)   --------->ANAC46           <---------ARR14(2)<---------YAB1       <---------ANAC58 ---->DEAR3(2)     --------->ANAC58       <---------At4g35610--------->ICU4          <---------ANAC58   cgacatctcgtggagttggataagccactcgaaagtcgaaactcagaagatccaaccagagccatcatcatccttccaatggctattacttgagaactct  8994800               --------->MYB46(3)               --------->REM1(1)                                       ------->GAMYB              <--       --------->YAB1                                                --------->At4g35610        <----   --------->AHL20(2)                                                <---------At4g35610        ----- --------YAB1----------->RAV1(1)    ------>ZmHOX2a(1)             <------NtERF2                <----- ------At4g35610     --------->MYB46(3) <----------DOF2       <---------MYB46(3)     <----------DOF2   tctgattaaacatagcaacaacaacaactcttcttctcctctctttctcacttcaatttagcgatggctgcaactgcaatctcttctctttccttcccag  8994900                   ===============================HOX2a_HOX2a                   ------>ZmHOX2a(2)                  <------ZmHOX2a(2)                  <---------GLK1(1)                  --------->GLK1(1)                  ================================HOX2a_HOX2a                 --------->ARR14(3)                            <---------At4g35610                 <---------ARR14(3)                           --------->ARR14(2)                 --------->ARR11(3)                  --------->LBD16      --------->WOX13(1)                            --------->ANAC58     <---------WRKY12                               --------->ANAC58     <---------WRKY38(1)                            --------->ANAC46    --------->WRKY18(1)                            <---------LBD16--------->ZAT18                 <-- --------DOF2    --------->ARR14(2)               ------>NtERF2--------->At4g35610      <----------DOF2 -----ZAT2       <---------ARR14(2)               <---------ATERF1(1)               <----------DOF2 ---->ZAT2       <---------AGP1<-----------ARR10 --------->DEAR3(1)            ---------->ID1-------- ----TOE1(2)     <---------ARR11(3)        ------>ZmHOX2a(1)  <---------ARR14(2)   <---------DAG2 <--   ctttgggtcaatcggacaagatctccaatttcgcatcttctcgtcctctcgcctccgcaattcgcatctgcacaaagttttctcgcctttctttgaattc  8995000                                                ----------->HVH21                                                --------->WRKY38(1)                                               <---------MYB52(1)                                              --------->At4g35610                                              <---------ATERF1(1)                                              --------->LBD16                                              <---------DEAR3(2)                                              <---------At4g35610                                             --------->ATERF1(2)                                             <---------DEAR3(1)                                             --------->DEAR3(1)                           <---------AtLEC2------>NtERF2            <---------ARR11(3)           --------->MYB46(3)   <---------ALFIN1     --------->ANAC46 --------->DEAR3(2) -------ANAC58         <---------At5g28300--------->DEAR3(1) ->ARR14(2)<---------GLK1(1)            <---------At5g28300 -------ANAC58        <-----------GT1  <-----------GT1   --------->HSFB2a(2) <-----------GT1<--------   gcgttccacttcgaaatctcttattcactgcatgtccaatgttaccgccggtgactcttcttgaacttcacattgcatttcacaattcattctcctttgt  8995100                                                                  ----------->RAV1(2)                                                              ------->TEIL                                                         --------->At4g35610                                                         <---------At4g35610                                                        ----------->ARR10                                                       <-----------RAV1(2)                                                     <-----------HVH21                                                    <------MYB83 ------>NtERF2                                                    <------MYB46(1)                                                    <---------MYB46(3)                    <----------DOF2             <-----------RAV1(1) ------>ZmHOX2a(1)         ------>ZmHOX2a(1)                    <---------DAG2              ==============================RAV            -------- --DOF2 ---------->DOF2                         ===================RAV          ---------->DOF2 -----   tttgtattgaaaaaggctctgactttatctgcattcactctcttgtggttttgttggtcagatgtgcctcctgtatcagagacaaagtcgaaattcctaa  8995200  Previous    Next  AGI:  At2g20880.1    Description:  AP2 domain-containing transcription factor, putative. Identical to Ethylene-responsive transcription factor ERF053 (ERF053) [Arabidopsis Thaliana] (GB:Q9SKT1); similar to AP2 domain-containing transcription factor, putative [Arabidopsis thaliana] (TAIR:AT4G28140.1); similar to dehydration-responsive element binding protein 5 [Glycine max] (GB:ABQ53928.1); contains InterPro domain DNA-binding, integrase-type; (InterPro:IPR016177); contains InterPro domain Pathogenesis-related transcriptional factor and ERF, DNA-binding; (InterPro:IPR001471) Range:  from: 8993054    to: 8994344    Orientation: Forward Links:  TAIR  MIPS    AGI:  At2g20890.1    Description:  PSB29 (THYLAKOID FORMATION1). Identical to Protein THYLAKOID FORMATION 1, chloroplast precursor (THF1) [Arabidopsis Thaliana] (GB:Q9SKT0;GB:Q8LB69); similar to chloroplast light-regulated protein [Brassica rapa] (GB:ABV89647.1) Range:  from: 8994747    to: 8996497    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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