Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                <---------ZAT2                                                              --------->At4g35610                                                              <---------At4g35610                                                              --------->ZAT2                                                             ------>NtERF2                                                           <------NtERF2         <------NtERF2                                                          --------->ABI4(2)     <------MYB83                                                          ------>NtERF2         <------MYB46(1)                                                         ----------->HVH21     <---------DEAR3(1)                                                       --------->LBD16         --------->ALFIN1                                                     <---------LBD16          <--------P          ---           -------->HAHB4                         <---------ANAC58           <-------GAMYB   <-------           --------->YAB1                         <---------ANAC58       <---------DEAR3(1) <--------        --------->YAB1                         <---------MYB52(1)        --------->ETT(1) <---------ARR14(2) ------->ETT(2)        --------->MYB52(2)     <-------GAMYB--------->ATERF1(1)--------->ALFIN1------- --------->HVH21      --------->ALFIN1       <---------MYB46(3)      <---------ATHB12<----------DOF2 -----MYB46(3)   <---------LBD16     <---------ARR14(2)<---------At4g35610 <------NtERF2  --------->ARR14(2)   gttgacagattaataatactcagggtagtggcactggtggaacttggccgttgcttccggtgccagctccaatggtcggggttggcgcttcaaatccggg  8989400                      --------->ZAT2          ------>NtERF2                      <---------ZAT2        <---------RAP2.6(2)                     ----------->RAV1(1)   <-------TEIL                     ------>NtERF2       <---------SPL7                                            --                    --------->DEAR3(1) <---------------AtSPL3                    ----------->RAV1(1)<            <-----------ARR10      --------->ALFIN1                              ------>NtERF2-------            --------->ARR14(2)   <---------ANAC58                              --------->MYB46(3)  --            <---------ARR14(2)   <---------ANAC58      --------->ZAT18    --------->GLK1(1)   <------            <---------ARR11(1)   <------MYB46(1)------>NtERF2             <---------GLK1(1)   <------           <---------ARR14(1)    <------MYB83<---------ATERF1(1)         <---------ARR14(2)   <------  <----------ID1 --------->ANAC46<---------ANAC46<------NtERF2     --------->ATHB12           ------- ------>ALFIN1--------->YAB1    --------->MYB55(2)     <---------ZAT18   <---------GLK1(1)--------->ALFIN1 --LBD16   <---------CCA1(2)    <---------MYB46(3)    ---------->ARF1    --------->ARR14(2)   ------- -LBD16  <---------ANAC58    <-------GAMYB--------->ALFIN1        <---------YAB1--------->ANAC46   <- -->LBD16<---------ANAC58    <---------ZAT2--------->SPL7     --------->AHL20(2)<---------ALFIN1 <---   gtttgggacaagcgtatcatcgccaccagggagttgggtgtgaggtccggccccttgtccaccattatatgatgggattcccccaccagtaagtggagct  8989500                                                         <-----------------AGL1       <------ZmHOX2a(1)                                ------>MYB83 ----------->HVH21                                      ------>MYB46(1) ------->At4g35610                                   <---------HSFC1(2) -----------HVH21                                    --------->HSFC1(2) -->GLK1(1)                                          <---------HSFB2a(1) ------->LBD16                                       --------->HSFB2a(1) ---GLK1(1)                                         ------->TEIL ---At4g35610                                    --------->ANAC58 ---ZAT2                                     --------->ANAC58   <---------LBD16                ------ -->ZAT2                          <----------DOF2--------->ANAC58--------->LBD16 <---------MYB46(3) -->At4g35610         --------->RAP2.6(3)    --------->ANAC58  <---------LBD16   <------MYB83  <----- --------At4g35610 <xxxxxxxxxxxxxxxxxxsmallRNA(fl3)<---------ARR11(3)  --------->YAB1         <------ ------LBD16      <---------------AtSPL3   <------ZmHOX2a(1) <---------ALFIN1    <------MYB46(1)   ccggtgacaggattgtaagggtagaacggcttcttgcatttgggaggaagcaagaaccttccaacaccgggaatgagaatagttggtttgggctcaatgg  8989600                                                           <---------ZAT18                                                           <---------ZAT14                                                           --------->ZAT14                                                           --------->ZAT18                                                     <---------bZIP60(2)                                                     --------->bZIP60(1)                                                     --------->ANAC55(2)                                                     <---------bZIP60(1)                                                     <---------ANAC55(2)                                                     <---------ANAC46         <-----------RAV1(2)                         <---------ANAC58              --------->ANAC46    ---------->DOF2                                <---------TGA2(2)               --------->ANAC58  --------->ANAC58          <---------ZAT18       ----------->TGA1                 --------->ANAC58  --------->ANAC46      --------->ATHB12          ----------->HVH21            <------ZmHOX2a(2)  --------->ANAC58   <---------bZIP60(1)        --------->TGA1a                --------->CCA1(2) ----->GT1           --------->bZIP60(1)        --------->ANAC55(2)           --------->ARR14(2) ----MYB46(3)  <---------MYB46(3)               <---------ANAC55(2)           <---------ARR14(2) ---ATHB12    --------->ALFIN1       <---------ZAT18 <---------ANAC58         --------->AGP1   ttacaagaaagtcagggtgtttgacatcagtggtcttaggggacttgggaacgtgacgtagtccactcacttgctctacagatccaagcactaggcttaa  8989700                                                       <-----------RAV1(1)                 <---------AtMYB61               <---------AHL20(2)                 <---------DEAR3(1)         --------->AHL20(1)               --------->LBD16              <---------AHL20(2)              <---------ANAC46              --------->AHL20(2)             <---------ZAT14                <---------AHL20(1)             <---------LBD16               <---------AHL20(2)             <---------At4g35610           --------->AHL20(2)             --------->At4g35610        <---------AHL20(2)       ================================HOX2a_HOX2a         --------->ATHB12              --------->AHL20(2)        <------ZmHOX2a(1)           *TSS<---  --------->ANAC58                    <---------MYB52(1)  <---------REM1(1)                 ------>ZmHOX2a(1)  --------->ANAC46               --------->ANAC58<---------AHL20(1)          <---------TOE1(2)-------  --------->ANAC58----------->GT1--------->ANAC58--------->AHL20(2) ---------->DOF2       ------>ZmHOX2a(2)   aaccacgacaatgactgcggaggtgataagtgaagaagccattaattttattttattttgttgtagaggagaaagctcgtgtgtttgtttgatcctgtgg  8989800                                         <---------ANAC46                        ---------->DOF2                                     <------------CBF                  ----------->GT1                                   --------------->AGL15            --------->CCA1(2)                    ----------->GT1<---------------AGL15           --------->ARR11(3)         -------     --------->ALFIN1             <-----------------AGL3       --------->At4g35610       ----------->GT1 ------ANAC46   ------->TEIL     --------->At4g35610           <---------At4g35610     <---------ANAC46 -->ALFIN1  ------->TEIL         <---------At4g35610 <---------TOE2(3)<---------YAB1   --------->ALFIN1   agggaatgtgtgtgtatgtatatagtaaaatactgagctaattgtgggaacatttaacgaaggtgagatgatatggttgaaaataaagggtgtgtaacaa  8989900                                                                <-----------RAV1(1)                                       <---------MYB46(3)       <---------REM1(1)                                       ----------->GT1          <---------MYB46(3)                    <---------ANAC58<---------ANAC46         <-----------RAV1(1)                    <---------ANAC58<------MYB46(1) --------------->AtSPL3      <---------YAB1                <---------YAB1      <------MYB83  <---------ARR14(2)            <---------AHL20(2)             <---------YAB1        <---------MYB46(3)--------->ANAC46          --------->AHL20(1)          --------->ICU4           --------->MYB111(1)    <----------DOF2      --------->AHL20(2)         <-------GAMYB             <---------AtMYB61--------------->AtSPL8     <---------AHL20(1)  <-        ----------->GT1            --------->MYB55(2)--------->ANAC55(2)      --------->YAB1    <----        <---------MYB46(3)         --------->MYB46(2)<---------ANAC55(2)  --------->AHL20(2)---------     <---------ANAC46  <---------ATERF1(1)        --------->ARR14(2)   <----------DOF2   --------->ETT(2) -->MYB46(3) --------->ICU4        --------->MYB111(2)  ------->TEIL  <---------DAG2     <---------ETT(2)   atgggtagtgtggttattattagcgagcctccaaagtttggtggtaacaacgtatacgtacttttgttgttgccttttaaatataattctgtctacaact  8990000                                                                    <----------DOF2                 <      <---------At4g35610                                          <---------ANAC46             <----  <---------MYB46(3)                                               <---------ANAC58      <---------AHL20(2)  <-----------RAV1(1)                                         --------->ALFIN1          <---------AHL20(1)  <---------REM1(1)                                           <---------ANAC58          <---------ARR11(3) ----------RAV1(1)      <------NtERF2                         <---------ANAC58   <---------GLK1(1)  - ------DOF2        <---------RAP2.6(2)            ----------------->AGL1         --------->GLK1(1) <- >REM1(1)         --------->RAP2.6(3)            --------->ZAT18   <---------ANAC58    <---------CCA1(2)   tttgttgttgctgtcttaaatacggcctcatggaccataatacagcgagagagcccaaataggtgagtggctttcattttttgatatccatatattttct  8990100                                          --------->YAB1                                       --------->YAB1                                   ======================================MADS_MADS              ============================HOX2a_HOX2a         <---------LBD16           ------>ZmHOX2a(1)                                                -    <---------AHL20(2)             <---------------AGL15      <---------TOE2(3)                  ----    --------->AHL20(2)        <---------GLK1(2)              ---------->DOF2                   <----- ---------AHL20(2)          <---------YAB1<---------ICU4    <---------AHL20(2)         <-----------HVH21 -----YAB1    <------ZmHOX2a(2)--------->GLK1(2)       ----------------->AGL3       ------->MYC3<---- -------->AHL20(2)          <---------TOE2(3)   ---------->DOF2    <-------TEIL     <-------MYC3----- --------WOX13(1)           <---------TOE1(3)--------->YAB1 --------->AHL20(2)  <-------TEIL<--------   gattaattaatctcggatcaaactgtgtttaagattcctattaataataagaaagaaactaattaaagatgcattgtatacgtacacatggtcatgtccc  8990200                                                                                                  ---                                                                                       <-------MYC4                                                                                       <-------PIF5                                                                                       ------->PIF5                                                                                       ------->MYC2                                                                                       <-------MYC2      ---------->DOF2                                                                  <-------PIF4  --------->ANAC58                                                         --------->ICU4  ------->TEIL  --------->ANAC58                                                      <------ZmHOX2a(1)<-------TEIL --------->DOF2                                                        <------MYB83    <-------MYC3 ----->LBD16                                                           <------MYB46(1) ------->MYC3 ----LBD16                                                           <--------P<-----------RAV1(1)--- -----ANAC46                                                    <-----------RAV1(2)    ------->PIF4 ---->LBD16          ----------->GT1                            ===========================RAV    --- ---HVH21         --------->MYB52(1)                         ----------->HVH21<---------YAB1  -------   ggagaagcaaaaggaaaacaaaacggttgaatgcatagaataagtgtagaagaggctgatcaagggacagggtaggacttattgttgcacatgcatttat  8990300  Previous    Next  AGI:  At2g20870.1    Description:  cell wall protein precursor, putative. Identical to Putative cell wall protein precursor [Arabidopsis Thaliana] (GB:P47925;GB:Q9SKT2); similar to hydroxyproline-rich glycoprotein family protein [Arabidopsis thaliana] (TAIR:AT4G28160.1); similar to putative cell-wall P8 protein [Brassica napus] (GB:AAF29529.1) Range:  from: 8989069    to: 8989793    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At2g20875.1    Description:  EPF1 (EPIDERMAL PATTERNING FACTOR 1). similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G34245.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO24097.1) Range:  from: 8990155    to: 8990693    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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