Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100         <---------ARR14(2)       --------->ARR14(2)                 <---------ATHB12      <----------DOF2                    ------>MYB46(1)     <----------DOF2                     ------>MYB83   ------->TEIL     ------>ZmHOX2a(1)  <---------MYB46(2) ------->MYC3    ---------->ID1        <---------MYB59                  <------ZmHOX2a(1) <-------MYC3<---------DAG2--------->ALFIN1                         ---------->DOF2 ----TEIL    <----------DOF2        <-----------GT1       <---------ANAC46<------ZmHOX2a(2)        --   tcatgtgcctttctgctttttcctattaagtggtgttcttaccaaacatgttttgaagagacttgtaagtaaaaggatcacttgcattagtcagaaacag  8978000                                                        --------->ANAC58                                                        --------->ANAC58                                                        --------->ANAC46                                                      ---------->DOF2                                                     <---------ATHB12                                                    --------->ANAC58                                                    --------->ANAC58                                                   --------->WOX13(1)         <---------ANAC58                                                --------->ANAC58              <---------ANAC46                                                --------->ANAC58         --------->ANAC58                        --------->At4g35610    --------->MYB59           --------->ANAC58 --------->GT1      --------->TOE2(3)     ---------->DOF2  ----------->RAV1(1)<---------ANAC58-------   agagataaatgaaaaacaaaaacattagctaagacttaagagtctaaagtaggcaatcaagcgacatacaatggcaagtagcttgttggaaaaaaaaaac  8978100                                                                      ----------->HVH21                                                                    --------->CCA1(2)                                                                   --------->ARR14(2)                                                                   <---------ARR14(2)                                                                 ----------->ARR10                                                               --------->LBD16                                                          --------->At4g35610                              <---------At4g35610         <---------ZAT2                          ---                              --------->At4g35610         <---------ABI4(2)                       ---                           <-------TEIL                   <---------ZAT14                       <----                        <------MYB46(1)                   <---------At4g35610                <-------                        <---------MYB46(3)            <------ZmHOX2a(1)             <----------DOF2     --------->AHL20(2) <------MYB83          --------->ATHB12--------->DEAR3(1)   <---------ANAC58 -->MYB52(1)        <---------MYB46(3)       <---------YAB1<---------ALFIN1        <---------ANAC58--   gaatgaattaaaacaaaaaacgttgttggttcatcagactcagtggtatgatttgaggacagcaccgcagatatgacagacgatagctttccaagctttg  8978200                                                                                         <---------ANAC58                                                                                         <---------ANAC58                                                                                     --------->ATERF1(1)                                                                                     <---------MYB52(1)                   <---------ARR11(3)                                               <---------ZAT2                   --------->ARR14(2)                                               --------->ZAT2                   <---------ARR14(2)         --------->MYB46(3)                    <------NtERF2          --------->ANAC58                  ----------->RAV1(1)                     <---------At4g35610          --------->PCF2                  <------NtERF2                             <---------ATERF1(1)          --------->ANAC58              --------->ETT(1)        ------->TEIL        --------->At4g35610    --------->DAG2 --------->ARR11(3)  --------->DDF1         --------->LBD16      <---------MYB46(3)   ---------->DOF2 --------->GLK1(2)   --------->RAP2.6(3)   --------->ANAC46     --------->SPL7   ============================================bZIP_DOF     <---------LBD16      ------>NtERF2    --- ------>LBD16  --------->ANAC46        <<<<<<<<<<DREB2A    ------>ZmHOX2a(1)    <---------ATERF1(1)-- -------->GT1----------->RAV1(1)       <<<<<<<<<<DREB1A   <---------ALFIN1    <---------LBD16     <-- -----LBD16  <---------ALFIN1        ================================================MYC_MYB     <--- ---DOF2<---------PCF5           <-----------------AGL1 ------>ZmHOX2a(1)   -------->P ------>NtERF2- ------->At5g28300<---------GLK1(2)  <---------TGA1a   <---------ALFIN1    <---------ALFIN1   ------>ZmHOX2a(1)   cggtaaaaagggaccccacagaatcttgtggaggttctcatgtcggcaacaactgctcctcctccgcatcttgagcacaacccggccgctggcttcctcc  8978300        <----------DOF2    <----------DOF2   --------->HSFB2a(1) ------>LBD16 ------->LBD16         --------->ANAC58            <-----------RAV1(1)      --------->ARR11(3) -------LBD16          --------->ANAC46      <---------ANAC58               <---------ARR11(3) ------LBD16           --------->ANAC58      <---------ANAC58       <---------AHL20(2) -------->LBD16     <---------REM1(2)        <---------ANAC46 <---------ANAC46      *TSS ---------->DOF2   cccggactttctttctctggtctacaaggaaacagaagatggccatttcttgaatgttgttgttgtgtttttatttgaggtcttgttggaacaaagaggc  8978400                                                        ------->MYC3                                                        <-------MYC3                                                       <---------ANAC58                                                       <---------ANAC58                                                       ==============================================bZIP_DOF                                                       <---------TGA1a                                                       <---------ANAC46                                                       --------->O2                                                       --------->TGA1a                                                       <---------O2                                                      <------NtERF2                                                    --------->ATERF1(1)                                                    <------NtERF2                                                    <---------DEAR3(1)                                                   <---------ATERF1(1)                                                   <---------ABI4(1)                                                   ------>NtERF2                                                   <-----------------PIF3(1)        <------------CBF                                              <------ZmHOX2a(2)                <---------ANAC58                                        <---------MYB52(1)<-----------HVH21    <---------ANAC46                                       <---------SPL7 ------>NtERF2            <---------ANAC58                                   <-----------GT1<---------PCF5            ----------->HVH21                                   --------->MYB52(1)<---------ANAC46     <---------ZAT2                                 <---------MYB59  <---------TCP16(1)      --------->ZAT2                             <---------MYB52(1)------>ZmHOX2a(2)       <-------TEIL<---------AtLEC2         <---------ANAC46    --------->DOF5.7(2)  <---------DEAR3(1)  --------->CCA1(2)    <---------ANAC58        =====================================MYC_MYB  <---------At4g35610    <---------ANAC46        =====================================bZIP_DOF --------->At4g35610    <---------ANAC58        <----------DOF2  <---------ARR14(2)      <---------ARR14(2) <---------AtMYB61          <-------GAMYB    --------->ARR14(2)      --------->ARR14(2)   <----------DOF2   ctagtggtgtgtcttaaatagcagtttgggcgttatctaaccgttcggatcggggccgcgtgtcacacacagatacagctgacttgcattgacttttgag  8978500                           <---------ALFIN1                        <---------ICU4                        <-----------GT1                        --------->YAB1                     <---------ICU4              --------->ZAT6        <---------AHL20(2)                     --------->YAB1    --------->ARR11(3)              <---------ICU4                    <---------YAB1     <---------ARR11(3)              --------->ATHB12            <-                   --------->AHL20(2) --------->REM1(1)               --------->AHL20(2)        -----                  --------->YAB1    ----------->RAV1(1)         <-----------GT1          <---------CCA1(2)   tattcaaattcgacattgaattataatcaccacttgtgcaacatcttcttatcactctcaactgtttgactatttattgctacagaagcccatttcttca  8978600                                                                                        --------->ANAC58                                                                                        <---------ANAC55(2)                                                                                        <---------ANAC46                                                                                        --------->ANAC58                                                                                        --------->ANAC55(2)                                                                                        --------->O2                                                                                        <---------TGA1a                                                                                        --------->TGA1a                                                                                        <---------O2           --------->WRKY12                                                             --------->ANAC55(1)      --------->ANAC58                 <-----------GT1                          <---------MYB46(3)      --------->ANAC46               <---------AHL20(2)                         --------->MYB55(2)      --------->ANAC58             <---------YAB1                               --------->MYB52(2)    --------->REM1(1)            --------->AHL20(2)                           <---------MYB52(1)    <---------ALFIN1             --------->ATHB51--------->ICU4 <---------TOE2(3)=================MYC_MYB   --------->ZAT14              <---------MYB52(1)              <---------TOE1(3)<-------GAMYB<------ ----------GT1          --------->MYB52(2)   ------->GAMYB <---------ZAT6    --------->TOE2(3)<------ ---->TOE2(3)  <----------DOF2  --------->ICU4   <---------ATHB12 <-----------HVH21 <-----------HVH21   ttaactacacccattgactttctcgttcgtagccattattttaacaacgaaatgatgcctattgttaaggtcacccatacgttagttgtcacgtatgcgt  8978700                 <---------ZAT14                 <---------ZAT18        <------NtERF2       ------>NtERF2      <---------ANAC46      <---------DEAR3(1)      <---------ANAC58      --------->DEAR3(1)      <---------ANAC58     --------->RAP2.3(1)     <------NtERF2                                                                 ---------->DOF2     --------->ATERF1(1)                                                 <---------WOX13(1)    <---------RAP2.3(1)                                                  <---------YAB1   <---------DEAR3(1)                     --------->GLK1(1)            --------->ATHB12  --------->At4g35610                     <---------GLK1(1)            ----------->GT1  <---------At4g35610      <---------ANAC58                           <---------YAB1 ----------->GT1  --------->ATERF1(1)      <---------ANAC58  <-----------GT1          --------->ICU4--------->DAG2 ---ANAC58       --------->ZAT14        <------ZmHOX2a(1)    <----------DOF2  --------->YAB1 ---ANAC58       --------->ZAT18      <---------TOE2(3) <---------At4g35610--------->YAB1          --   tggaagcggcgtctctgagtggactgtttacttgcatatttaggatttcacaatttggagcttctttgaaagatgattaataagaaaaagtaagtaagaa  8978800                                                                                                   <-                                                                                                -----                       ----------->GT1          --------->TOE2(3)                               <----         <----------DOF2                     <---------GLK1(2)                               <-------        <---------DAG2--------->DAG2  --------->ZAT14                 <------ZmHOX2a(1)     <--------     <-----------GT1 ---------->DOF2  <---------ZAT14           <---------LBD16             --------- ------->WRKY12 <---------------AGL15 --------->ZAT18 <---------AHL20(2)                   --------->MYB52(1)   gttgacttcaccttttaccaaaaaaaagtaagaagttgagttcactggaatcttagttaaatgaaatcgggaggaaaacaaaaatgaagtgagtagcgga  8978900  Previous    Next  AGI:  At2g20835.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G15534.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO39221.1) Range:  from: 8977967    to: 8978384    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At2g20840.1    Description:  secretory carrier membrane protein (SCAMP) family protein. Identical to Secretory carrier-associated membrane protein 1 (SCAMP1) [Arabidopsis Thaliana] (GB:Q9SKT3); similar to secretory carrier membrane protein (SCAMP) family protein [Arabidopsis thaliana] (TAIR:AT1G03550.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO24113.1); contains InterPro domain SCAMP; (InterPro:IPR007273) Range:  from: 8978793    to: 8981566    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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