Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                  --------------->AGL15                                                 <---------ANAC55(2)            =====================                                                 <---------YAB1                 =====================                 ----------->GT1           <---------TOE2(3)                    <---------------AGL15                 <---------ANAC55(2)  --------->AHL20(2)                       <---------ANAC58                 --------->ANAC58    --------->AHL20(2)                        <---------ANAC46 ----->ATHB51    --------->ANAC55(2) <---------AHL20(2)                        <---------ANAC58 ----->ATHB12    --------->ANAC58   --------->AHL20(2)          --------->MYB46(3) -----YAB1     <--------P           <---------AHL20(1)        <-----------GT1  <---------ANAC55(1)  - -ANAC46--------->ATHB12           --------->YAB1<---------ANAC46       --------->ANAC46       ------   aattggacaatgtttgggtaagtaatactcaaacccaaaataattttggttatgtatgggtttttaaccaatacccgaattacttgtattagaagtgaac  8964500                                                      >>>>>>>>>>AGL22                                                      >>>>>>>>>>AGL24                                                   <---------------AGL15                                                   --------------->AGL15                                                  ----------------->AG                                       <---------ARR14(2)                                       --------->ARR14(2)           --------->AHL20(2)                                  ----------->RAV1(1) >>>>>>>>>>AGL20       --------->ANAC58           ------>MYB83    <-----------------AG      ------->TEIL           <-----------GT1      <-----------------AGL1     ------>MYB83  --------------->AtSPL8         <-----------------AGL3     ------>MYB46(1) <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(s2)     ----------->GT1   <---------MYB59 <---------------AtSPL3         ----------------->AGL3  <xxxxxxxxxxxxxxxxsmallRNA(s)    ------>MYB46(1) <-----------------AGL2 ==================================================================MADS_MADS ===================================================================MADS_MADS -------->MYB52(1) <---------------AtSPL8         ----------------->AGL2                  --------->LBD16 ->TEIL--------->ANAC58------->TEIL   --------->GLK1(1)     ---------->DOF2              --------->ANAC46   ccaaaccgaacccaattcaaaattgtacgtataacccaacatatccaaaatttctaaatatggaaagaaaaaaaatccaaaatttctaaacccgaaaaac  8964600                                     <---------RAP2.6(3)                                     <---------DDF1                           --------->At4g35610                 ------>ZmHOX2a(2)   >>>>>>>>>>DREB2A        --------->ALFIN1         --------->ALFIN1     --------->LBD16    ----------->HVH21       <-----------ARR10                   <---------ANAC46 --------->ARR14(2)   ----------->RAV1(2)       --------->AGP1  ----------->GT1     <---------ZAT6 <---------ARR14(2)  ------->TEIL    >>>>>>>>>>DREB1A    ---------->DOF2  <---------ANAC46   tccaatccgaaaaatttgatccgaacctgacctgaataccgacatgcccagagctactccaaagtggggaaaattggctcggattagtgtggatgaagtt  8964700                                                                                                -----                                                                                               <-----                                                                                               <-----                                                                                             --------                                                                                          -----------                        xxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                        ---------->DOF2                       <---------ANAC46           ---------->DOF2              --------->ANAC58------                       <---------ANAC58--------->AHL20(2)                      --------->ANAC58------   <----------DOF2     <---------ANAC58<---------AHL20(2)                    ---------->DOF2<--------P   tttggctttgttatgtagttttttggcttgaagaccaaaatttatatagttccaaagtccaaactagcttagagaaattgaaagccaaaagagggtagat  8964800        --------->ZAT6  <----------DOF2                     <---------GLK1(2)                                        <----- ---->CCA1(2)                     <---------ANAC58                                            <------ ----ARR11(3)                     <---------ANAC55(2)                                         <------MYB83 ----ARR14(2)                     --------->ANAC55(2)                                         <------ --->ARR10                        <---------ANAC58                                            <------MYB46(1) >GT1 <-----------GT1           <-----------GT1         <---------ARR14(2)*TSS   ---------->DOF2    < --->ARR14(2)                ----------->GT1       ----------->GT1       <---------At4g35610 <------- --->ARR11(3)           --------->AHL20(2)  ---------->DOF2              --------->At4g35610<--------   atgtcttttaacactctcttacaaaaaaaaatagttacttgattctcaaagaagggtgaattcgaggttttttgcagcgaagagaaagaagatggtcggt  8964900                                                                                    --------->At4g35610                                                                                    <---------ZAT2                                                                                    --------->ZAT14                                                                                    <---------ZAT14                                                                                    --------->ZAT2                                                                      ------>ZmHOX2a(2)                                      --------->ARR14(2)             --------->CCA1(2)                                      <---------ARR14(2)             <------ZmHOX2a(2)                                  ------>ZmHOX2a(2)                 <---------ARR11(3)          <---------ANAC58      --------->AGP1  --------->AtMYB61   <---------ARR14(2)    <---------YAB1------>NtERF2 --------->ARR14(2)                  --------->ARR11(3) --GAMYB<-----------GT1        --------->At4g35610            --------->YAB1  <-----------GT1    ---- ---DEAR3(2)     <---------ETT(1)<------ZmHOX2a(2)    <---------ICU4--------->AGP1  <---------At4g35610 ---MYB46(3)     --------->ANAC46--------->CCA1(2)   <---------YAB1 --------->ARR14(2)         ------ ---------At4g35610     <---------GLK1(2)      --------->MYB46(3)   <---------AGP1--------->ANAC46--- --DEAR3(1)      --------->LBD16<---------ARR14(2) <---------ICU4   <---------ARR14(3)         <----- -ORA47(1)<---------ANAC58     <---------At4g35610 --------->YAB1   --------->ARR14(3)         ------   tgagctatttttgcttctcccgacaaaattctcagatccgaatacttccaccatcatcattcatttataagatctgggttttacacagctctgcgagtac  8965000                                                       --------->HSFB2a(2)                                                     <------ZmHOX2a(2)                                                    --------->ARR14(3)                                        <---------SPL7------>ZmHOX2a(2)                                     --------->ZAT2 <---------ARR14(3)                                     <---------ZAT2 --------->ARR11(3)      --------->YAB1            --------->LBD16     <---------AGP1     <---------YAB1            <---------ANAC46     <---------ARR11(3)  <------MYB83  --------->ICU4               --------->HSFB2a(2)  --------->ARR14(2)  <------MYB46(1) ------->GT1                <---------ARR14(2)  <------ZmHOX2a(1)      <---------MYB46(3) --->ZAT18        --------->ALFIN1   <---------At4g35610           <---------AtMYB61 ------>At5g28300<------ZmHOX2a(1)   --------->At4g35610        <---------SPL7                 ------ ----ZAT14     --------->ALFIN1<---------HSFB2a(2)  <---------ARR14(2)<---------ANAC46  <---------ZAT18 --->ZAT14  <------ZmHOX2a(1) <---------LBD16   =============HOX2a_HOX2a<---------DEAR3(2)   --------   agtaactatgagaaggagaggaggggatagtttccggagagctggacggaggaagatctcgaatgtggtatggtgggttctctctggtattgccctcctg  8965100                                                                                   <----------DOF2                                                                             ------>ZmHOX2a(2)                                                                            --------->GLK1(1)                                                                            <------ZmHOX2a(2)                                                                    --------->TOE2(3)                                                           <---------KAN4(2)<---------GLK1(1)                                                        ----------->GT1    <---------ARR11(3)                                                       <---------TOE1(3)   <---------AGP1                                                       <---------TOE2(3)   --------->ARR11(3)   <----------DOF2           --------->ICU4          ------>ZmHOX2a(1) ---------->DOF2 >ZmHOX2a(1)         <---------ZAT2                  ===============================HOX2a_HOX2a --->RAV1(2)      ---------->DOF2  ------->TEIL      ==============================HOX2a_HOX2a   ctcttctttctcattctctccaaagctggtcatattgaacctagaccctctattcctaaggtatattcaatctcaaagatctcttcttttgttcgatttc  8965200                                       --------->TOE2(3)                                     <---------DOF5.7(2)                                     <---------At5g28300                                 --------->bZIP60(2)                                 <---------bZIP60(1)                                 --------->bZIP60(1)                                 --------->O2                                 <---------O2                              --------->DEAR3(1)                             <---------At4g35610                          --------->ZAT14    --------->YAB1                          <---------ZAT14  <XXXXXXXXXXXXXXXXXXXXMIR426                    <----------DOF2--------->DOF5.7(2)                                              <                    =======================bZIP_DOF                   <---------YAB1        ------>ZmHOX2a(1)                ===========================bZIP_DOF                ------->TEIL   --------->ICU4   <-                <----------DOF2  --------->TGA1a                <---------YAB1<------ZmHOX2a(1)   <--        --------------->AtSPL8----------->HVH21           <---------ANAC46  <---------TOE2(3)     <--   aattgctaaattcgaaccctttcttttgtgcagcgacgttaccgtaatgacaaatttgtagagggtatgaatatgactgaggaaatgttgagtcctactt  8965300                                                                     --------->ARR14(2)                                                                     <---------ARR14(2)                                                                     --------->ARR11(3)                 <---------ICU4                                      <---------ARR11(3)                 --------->YAB1                                      --------->GLK1(2)   <---------ANAC58                                     ---------->DOF2                        ------   <---------ANAC58                             <---------YAB1      <---------GLK1(2)          ------ ---------MYB52(1)      <---------WOX13(1)   ---------->ID1 ---------->DOF2      <---------ANAC46   < ------GAMYB     -------->HAHB4            <-----------RAV1(1)----------->GT1    <---------ANAC58   - -------ANAC58  --------->ICU4          <----------DOF2--------------->AGL15     <---------ANAC58  -- -------ANAC58 <---------TOE2(3)   ---------->DOF2     <---------------AGL15 <---------MYB52(1)<-----   ccgttgctcgtcaagttaatgatcagattgctcttgctaaagcttttgttgtcattgctaaagaaagtaagaatcttcagtttgcttgggacttaagtgc  8965400  Previous    Next  AGI:  At2g20810.1    Description:  GAUT10/LGT4 (Galacturonosyltransferase 10); polygalacturonate 4-alpha-galacturonosyltransferase/ transferase, transferring glycosyl groups / transferase, transferring hexosyl groups. similar to GAUT4 (Galacturonosyltransferase 4), polygalacturonate 4-alpha-galacturonosyltransferase/ transferase, transferring glycosyl groups [Arabidopsis thaliana] (TAIR:AT5G47780.1); similar to hypothetical protein OsI_016947 [Oryza sativa (indica cultivar-group)] (GB:EAY95714.1); similar to H0410G08.13 [Oryza sativa (indica cultivar-group)] (GB:CAH67658.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO24127.1); contains InterPro domain Glycosyl Range:  from: 8964874    to: 8966861    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version