Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                -------                                                                                             <-------                                                                                             <-------                                                                                             <-------                                                                                             ========                 --------->At4g35610                                                         --------                 --------->ZAT2                                                              --------     ---------->DOF2                                                                         <------- <------ZmHOX2a(2)                                                                  <---------DAG2 -------->AGP1   <---------At4g35610                                                <----------DOF2 ---------ARR14(2)                                     <---------KAN4(2)    ---------->DOF2  <------- -------->ARR14(2)                                     <---------ARR14(2)   ========================= ------->At4g35610        <----------DOF2 *TSS    ---------->DOF2 ----------->GT1   ================= --->TOE1(3)     <---------ZAT2          <------NtERF2 --------->ARR14(2) <---------YAB1    <-------TEIL --->TOE2(3)  ---------->DOF2          <---------DEAR3(1)  ------------>CBF--------->YAB1 <---------SPL7   cagatccaaaagaaaacaaagctgagagctttggaagagaggctgcgaatgtgaaagaatatgcaatatggaaactatcaaagctactttagggtacgtg  8962900                 --------->ANAC46               --------->ANAC46               --------->ANAC58          --------->DEAR3(1)          ----------->HVH21        <---------DEAR3(2)        <---------ATERF1(1)       <---------DEAR4(1)       <---------DEAR3(1)      <---------ORA47(1)      --------->ALFIN1     <-----------HVH21 -->TOE1(2)    --------->ANAC58 --TGA1a<---------ORA47(2) --ANAC46--------->RAP2.3(1) --ANAC58<------NtERF2                 <----------ID1                                             <-- ========================================bZIP_DOF                                          --------->AHL20(2) ->TGA1a<---------RAP2.3(1)            ----------->GT1                              ------->GAMYB --- ->ANAC55(2) <---------ALFIN1         ------------------------>ANAC81 <------ZmHOX2a(1)  --------->ANAC58 --ANAC58--------->ATERF1(1)         ---------->DOF2         <---------ANAC46      --------->ANAC58 --ANAC55(2)<------NtERF2    --------->AHL20(2)              ----------->GT1       --------->ANAC58 ==bZIP_DOF------>NtERF2     <---------AHL20(2)   ---------->DOF2   <---------TOE2(3)    --------->ANAC58 ==bZIP_DOF----------->RAV1(1)---------->DOF2---------->DOF2--------->MYB59      --------->MYB52(1)   agagagaggtcggcgacacacaaaacaaaatttaaagaaaaaagaaaaaaagaaaagacagtgaggtatttaggaaattggagtaacgcccaagtaaatt  8963000        <----------DOF2    --------->KAN4(2)   <---------KAN4(1)                  --------->At4g35610                                           -   <----------TaMYB80                 <---------At4g35610                                          <-   --------->KAN4(1)            --------->AHL20(2) <---------TOE2(3)                               <-  ---------->TaMYB80        --------->AHL20(2)     <---------TOE1(3)                       --------->ICU4  <---------KAN4(2)       ----------->GT1 --------->ARR14(2)                           ----------->RAV1(1) -------TOE2(3)          <---------TOE2(3)<---------GLK1(2)                       ---------->DOF2  <- ------>MYB59           ---------->DOF2   <---------ARR14(2)<----------DOF2     <----------DOF2   <--   taggtatattcttttttttttttttttaaagtaaataaacagcagatttgtttagggtttgactttctctcaaaactcgagactttaagcgacattatgt  8963100                              <---------AHL20(1)                              --------->AHL20(1)                             <---------AHL20(2)                            <-----------------AGL3                          <---------AHL20(2)              <---------RVE1(1)              <---------CCA1(1)             <---------ARR11(3)        --------->LBD16  --------->AHL20(2)       <---------LBD16  <---------YAB1      <---------ANAC46--------->YAB1 -------->LBD16       <---------ICU4                                   <---------YAB1 --------ANAC58      <---------YAB1                     --------->ARR14(2)         <---------AHL20(2) --------ANAC46   <---------YAB1                        <---------ARR14(2)    <---------YAB1 --------ANAC58   <---------AHL20(2)          --------->MYB46(3) <---------YAB1    --------->AHL20(2) -------LBD16--------->ARR11(3)<---------AHL20(2) <-----------RAV1(1) <-----------GT1   tccgcgttccctggagattttttattattatatatatttggaattcgaacaactgttggattcgattttgattttcatttctgattttatttggaatact  8963200                                                              <---------YAB1               --------->YAB1      --------->TOE2(3)        <-----------GT1 --------->YAB1       --------->DAG2           <-----------GT1         ------->TEIL       <-------TEIL      ---------->DOF2        <---------ICU4            <---------AtLEC2<---------AHL20(2)       <XXXX   --------->YAB1           --------->AHL20(2)       --------->AtLEC2 --------->AHL20(2)    <--------  <---------YAB1        ----------->GT1           *TSS<-------TEIL --------->YAB1      <----------DOF2   gtatatgataaagctaataagaagaatggaataaatacctcattcacttctatacatgcatgttacaattcataaaattcataactaaactttttatgtt  8963300                                                                                     --------->YAB1                                                                                 <---------RVE1(1)                                                                        <----------DOF2                                                                       <---------ANAC58                                                                       <---------ANAC58        <-----                                                                 <--------P      <---------CCA1(1)    <---------AtLEC2                                          <---------TOE2(3) <---------ARR11(3) XXXXXXXXXXXXXXXXMIR780.2                                     <---------TOE1(3) <---------ARR14(2) -- -TOE2(3)                  <----------DOF2              --------->ARR11(3)      --------->ARR11(3) --   atatatgcatgaagactatgagattgtgcctttacaaactcttatcgattacaaaaacgatattgaggtaagtgcttttgaagatattaatagtttttaa  8963400                                                     <---------ANAC46                                                     <---------ANAC58                                      <---------AHL20(2)                                 <-------TEIL        <---------ANAC58                             <---------TOE2(3)   <---------ANAC58                         --------->ANAC58                             <---------TOE1(3)   <---------ANAC58                         --------->ANAC58 ------GT1             <---------AHL20(2) --------->YAB1                        --------->GLK1(2) ------->ANAC58        --------->AHL20(2)<---------YAB1           ---------->DOF2       ---------->DOF2 ------->ANAC58      <----------DOF2  --------->AHL20(2)    ---------->DOF2  <---------KAN4(2)      -   caagaaaactattagtttgatgtctttaattaaggttcaatttatgaaaatgcttgcgagtttaaagagaaagtatgagaacaatcttgtgaaagccaag  8963500                                                                              ----------->RAV1(2)                                                                --------->ARR11(3)                                   <----------DOF2              <---------ARR11(3)                           ------>ZmHOX2a(2)                    <---------ARR14(2)        ------->TEIL     --------->ARR11(3)                   ----------->ARR10              -------- -------->YAB1           <---------ARR11(3)               <---------LBD16     --------->At4g35610  --   aatggtgatgaacatatcagacttcatgatctcagggcttttcaattgtctaagtttgtttggggagatattgaagaatcacctgtgaaatcgaagaaag  8963600                                 --------->ARR11(3)                                 <---------GLK1(2)                                 <---------ARR11(3)                    <------MYB83--------->YAB1                              <---------AtMYB61                    ----------->GT1  <----------DOF2                    <----------DOF2 -->DOF2 ------->TEIL        ---------->DOF2                  <------ZmHOX2a(2)                  ---- ------->MYB59      <------MYB46(1)  <---------DAG2          --------->ARR11(3)         ------->TEIL   ttatgtctatgaaccttgagcttggtaaaaacaaagatacttttcccaattcttctcttgttagatcactagagcgttttggtgttgatgaacttactcc  8963700                                                   --------->At4g35610                                               ------------>AtMYB77                                           <---------HSFB2a(2)                                           --------->HSFB2a(2)                                      --------->CCA1(2)                                     --------->ARR14(2)                                     <---------ARR14(2)                                     --------->ARR14(3)                                     <---------ARR14(3)                                     <---------ARR11(3)                                     --------->ARR11(3)                                          ----                            <------ZmHOX2a(1) <------ZmHOX2a(1)   <---------TOE1(2)             -----                   <---------WRKY18(1)<---------GLK1(1)      <----------DOF2               <---------HSFB2a(2) -->ZmHOX2a(1)     >>>>>>>>>WRKY18 ----------->ARR10    ---------->DOF2                    --------->HSFB2a(2)   tcaacaaggattgagtagccttgacttagaggataagaagatattcgaggagcagttggaaagctttgcaggttatagaattcgagttctattcgcgaaa  8963800  Previous    Next  AGI:  At2g20800.1    Description:  NDB4 (NAD(P)H DEHYDROGENASE B4); NADH dehydrogenase. similar to NDB3, NADH dehydrogenase [Arabidopsis thaliana] (TAIR:AT4G21490.1); similar to NDB1 (NAD(P)H DEHYDROGENASE B1), NADH dehydrogenase/ disulfide oxidoreductase [Arabidopsis thaliana] (TAIR:AT4G28220.1); similar to NDB2 (NAD(P)H DEHYDROGENASE B2), disulfide oxidoreductase [Arabidopsis thaliana] (TAIR:AT4G05020.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN66469.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO16606.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO41237.1); contains InterPro domain FAD-dependent pyridine nucleotide-disulphide Range:  from: 8960333    to: 8962842    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At2g20805.1    Description:  similar to DNA-binding storekeeper protein-related [Arabidopsis thaliana] (TAIR:AT1G11510.1) Range:  from: 8963250    to: 8963818    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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