Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                        <---------DEAR3(1)                                                   --------->ANAC46                                                  <---------LBD16                                                  <---------At5g28300                                                 --------->MYB52(1)                                             <---------ALFIN1                                            --------->ATERF1(1)                                            <------NtERF2                                           ------>NtERF2                                           <---------ATERF1(1)                                           <---------RAP2.3(1)                                          <---------TCP20                                          <---------TCP16(1)                                          --------->PCF2                                          --------->ANAC46                                          --------->RRTF1(2)                                          --------->RAP2.3(2)                                          --------->DEAR3(1)                                          --------->RAP2.3(3)                                         --------->ATERF1(1)                                    -----                                         --------->RRTF1(1)                                   <------                                         --------->ERF1                                       <------                                        <---------ATERF1(1)                              <---------HSFB2a(2)                                        <---------DEAR4(2)                               --------->HSFB2a(2)                                       <---------DEAR3(1)                               ------>ZmHOX2a(2)                                      --------->DEAR3(2)     <---------GLK1(1)        --------->ARR11(3)                                     --------->MYB52(1)<-------GAMYB                  <---------ARR14(2) ----->ANAC58                      ----------->HVH21  <---------ANAC46      <---------At4g35610<----- ----->ANAC58              --------->YAB1--------->RAP2.3(1) --------->GLK1(1)        <---------AGP1 ----->ANAC46    --------->DAG2--------->ZAT14  ----------->HVH21    ==========================HOX2a_HOX2a -----AGL15     ---------->DOF2<---------ZAT14 <---------MYB52(2)    ------>ZmHOX2a(1)--------->ARR14(2)   agcgatgaattgaaatgaaaaagcgagaattagaacactgaccggcgccactcacggcgttggaaaccctcctctctcatctcatttggatctggaagaa  8951900                                         <------NtERF2                                        ------>NtERF2                                        --------->ABI4(1)                                       --------->DEAR3(1)                                       <---------DEAR3(1)                                       --------->ATERF1(2)                                       --------->RAP2.3(2)                                       --------->RAP2.6(2)                                       --------->RRTF1(3)                                       --------->RRTF1(2)                                       --------->DREB2C(2)                                       --------->RAP2.3(3)                                      <------NtERF2                                      --------->ATERF1(1)                                      --------->RAP2.6(1)                                      --------->DEAR4(2)                                      --------->RRTF1(1)                                      --------->RAP2.3(1)                                      --------->ERF1                                      --------->ORA47(2)                                     <---------RAP2.3(1)                                     ------>NtERF2                                     <---------ATERF1(1)                                     --------->DREB2C(1)                                     <---------DREB2C(1)                                     --------->ABI4(1)                                     <---------At4g35610                                     --------->At4g35610                                    --------->RAP2.6(2)                                    --------->ATERF1(2)                                    --------->DEAR3(1)                                    --------->RAP2.3(2)                                  ------>NtERF2                                                   <--                                  <---------At4g35610                                             ---                                  --------->At4g35610                                             <--                                  <---------ATERF1(1)                                             <--                                 --------->DEAR3(1)                                               <--                               --------->At4g35610                                               ----                               <---------At4g35610                                               ----                               ----------->RAV1(2)                                               ----                              --------->DEAR3(1)             <---------DOF5.7(2)                 <---                           --------->AtMYB61                 --------->MYB52(1)                  ----                           <---------ALFIN1       <---------MYB52(1)                             ----                           --------->DEAR3(1)<---------ARR14(2)           ---------->DOF2       <----           <-----------------------TaNAC69(2)--------->ARR14(2)        <-------TEIL            <-----    --------->MYB52(1)    --------->MYB46(3)<---------MYB52(1)        --------->CCA1(2)     --------- ---->GLK1(2)      ------>ZmHOX2a(2)<---------ATERF1(2)    --------->DOF5.7(2)        --------->DAG2 ---HSFB2a(1)     <------ZmHOX2a(2)--------->RAP2.3(1)    --------->TOE2(3)          ---------->DOF2 ---HSFC1(2)     <---------ARR11(3)--------->ERF1<-------GAMYB  ------->GAMYB      <------ZmHOX2a(1) ----ARR14(2)    --------->ARR11(3)--------->ATERF1(1)    --------->TOE1(3) --------->DAG2  <--------   tcggaccatcggaagcgaagatcgcatcaccaccgctgccgccgccgtttccgttagcatcgttaacggaagattcaaaaggcgaggaaaagtcatggtt  8952000                                         ------>ZmHOX2a(2)                                        --------->GLK1(1)                                        <---------GLK1(1)                                        <------ZmHOX2a(2)                       <---------------AGL15 ----MYB46(1)          --------------->AGL15 ------>At4g35610     ----------------->AGL1 ----MYB83 <---------MYB111(1)         --------->ARR14(3) -------ANAC46        ----------------->AG -------ANAC55(2)     <-----------------AGL2 ----->MYB59 ------>MYB83              <---------ARR14(2) ----->MYB111(1)     <-----------------AGL1                             <---------TOE2(3) ----->MYB52(2)     <---------ARR14(2) <-----------ARR10             <---------WOX13(1) ------AtMYB61<---------ARR14(2)       --------->ARR11(3)         --------->LBD16 ----->MYB111(2)    --------->ARR14(2) --------->ARR14(2)      --------->MYB52(1)      <--------P <-- ----->MYB46(2)    <---------CCA1(2)   <---------ARR14(3)    --------->MYB46(3)       <-------GAMYB -----MYB55(1)--------->ARR14(2)       <---------ARR11(3)  --------->GLK1(2)         <---------MYB46(3) ----MYB52(1)------>MYB46(1)          <------ZmHOX2a(1)    --------->ARR14(2)       <---------TOE2(2) >ICU4    --------->ANAC58            <---------GLK1(2)    <---------ARR14(2)       <---------TOE1(2) -YAB1    --------->ANAC58  <---------LBD16      ---------->DOF2<---------LBD16    <------NtERF2 <---   aggtgaagaagcaccaaatccatatccatttggggaagcaggatctccattgaaagaagagaatccaccggattgatgttgagtcggaggttgctgtgct  8952100                   --------->AtMYB61                 ------>NtERF2          --------->YAB1                                     --------->GLK1(1)         <---------TOE2(3)                                   <---------GLK1(1)         <---------YAB1     <---------ANAC46          --------->At4g35610         <------NtERF2   <--      --------->ICU4---------->DOF2                   <---------At4g35610       --------->RAP2.6(2) -------ANAC46  --------->RAP2.6(2)                   <---------ZAT2       ---------->DOF2---------->DOF2 ------LBD16   --------->MYB46(3)                     --------->ZAT2  --------->YAB1 --------->ICU4   tcggagaaattatcgtagccaccaaagtcttcgtgttcagacggagaatgggtttgagctgggaaatctccatcatcaaaagtcgccatggttaaaggag  8952200            --------->ARR14(2)                                 --------->ANAC58            <---------GLK1(2)                              --------->ANAC58            <---------ARR14(2)                         --------->ANAC46      <------ZmHOX2a(2)                <---------TOE1(2)   --------->ANAC58       <---------YAB1     --------->ARR11(3)                <---------TOE2(2)   ------------------------>ANAC81     <---------ARR11(3)             ------>ZmHOX2a(2)  --------->ANAC58        <---------YAB1    <---------At4g35610         <---------YAB1         --------->ANAC58    <------ZmHOX2a(1)     <--- --------DOF2 <-------TEIL   <----------DOF2  <---------YAB1   --------->ANAC58--------->ICU4<-------   cttttgagatcacagattcacaagaagaagacttttgatcgctggtttttgattcacaaggaagcaagacaagagaaggagattattaaacgctgtcgtc  8952300                         *TSS                      --------->ATHB12                                    <---------ARR14(2)                      <---------ICU4                                      --------->ARR14(2)                     <---------YAB1                                       ------>MYB46(1)                 ------>ZmHOX2a(2)                                        ------>MYB83                <------ZmHOX2a(2)                                         --------->MYB52(1)                --------->CCA1(2)                                       <---------MYB46(2)               --------->ARR14(2)                                       --------->DEAR3(1)               <---------ARR11(3)             --------->WRKY38(1)       <---------MYB52(2)               --------->ARR11(3)             --------->WRKY45      ------->GAMYB               --------->AGP1               ------->MYC3           <---------MYB52(2)               <---------ARR14(2)          --------->O2           ------>MYB83               <---------AGP1     <---------AHL20(2)            ------->GAMYB  <---------MYB52(1)  *TSS              <---------CCA1(2)  --------->YAB1              <-----------GT1   <-----------HVH21 <---          <---------ANAC58      <---------YAB1--------->WRKY12 --------->MYB46(3)             <------          <---------ANAC46      ----------->TBP<---------WRKY18(1)------>MYB46(1)        <---------ICU4 -------DOF2 ----------->ARR10--------->YAB1<-------MYC3 <-------MYC3   --------->MYB46(3)    ------- --ANAC46 <---------ANAC58   <---------YAB1<---------O2  ------->MYC3  --------->ANAC46  --------->YAB1   tttcaaagttttgcgtagatctgatgatttcattataaaaatgccacgttgaccaaaaacgtgtaaccaactcaccgaaccggtcgtctaaaaatgatgt  8952400                                                                   <------MYB83                                                                   <---------MYB46(3)                                                                   <------MYB46(1)                                                                  <---------DEAR3(1)                                                                 <--------P                                                                --------->ARR14(2)                                                                <---------ARR14(2)                                                                <-----------HVH21                                                               <------NtERF2    --------->ANAC55(2)                                                     <<<<<<<<<<<<<<<<<LFY   --------->DOF5.7(2)                                                    --------->ANAC58 <---------ARR14(2)        <-----                                                  --------->CCA1(2)<---------DEAR3(2)          <-----                                             ---------->DOF2  <---------MYB46(3)<---------ANAC55(2)                                           ------->GAMYB      --------->MYB55(2)<---------ANAC58                <<<<<<<ZML2              <---------LBD16     <---------ANAC58   <---------ANAC46             <---------HSFC1(1)         <---------DOF5.7(2)  <---------ANAC46   <---------ANAC58 ------ANAC46--------->HSFC1(1)         --------->MYB52(1)   <---------ANAC58 <---------DOF5.7(2) ---bZIP60(1)<---------HSFB2a(2)      --------->DOF5.7(2)   <---------LBD16--------->HSFB2a(2) <----- -->bZIP60(1)--------->HSFB2a(2)     <----------DOF2--------->ANAC58 --------->ARR14(2)        <-----   cgtttagtctttcttctagaacacaaaatcgattttgagctttaacggaaagagacgacaatggcgggtcggttcttcgataacgtgatgcctgatttcg  8952500                                        <---------At4g35610                                       <---------ARR14(2)                             <-------TEIL                            --------->ARR14(1)                           <---------ARR14(2)                           --------->ARR14(2)                            --------->ZAT2  <------NtERF2                           --------->ARR11(1)         <---------ANAC46   --------->At4g35610      ---                          <---------GLK1(1)           <---------ANAC58   <---------ZAT2<---------ZAT18                  <---------LBD16      --------->ARR14(2)--------->ARR14(2)           --------->PCF5         ---------->DOF2 ----------->ARR10  <---------ANAC58  <---------CCA1(2)---------->DOF2  <----  <------ZmHOX2a(1)     <------ZmHOX2a(1)   <---------ANAC58  ---------->ID1<---------At4g35610 ----- ----ANAC55(2)  <---------ARR14(2)     --------->GLK1(2) <---------ARR14(2) --------->At4g35610 <---- ----ANAC58     --------->ARR14(2)    <---------GLK1(2)<---------RAP2.6(3)  --------->ZAT2 <--------- ----ANAC58     ------->TEIL--------->CCA1(2)  ----------------------->TaNAC69(2)    <---------SPL7 ----ANAC46    <---------CCA1(2)     <------ZmHOX2a(1)<---------ANAC58   <---------At4g35610   <-----   tgaaggagaaggaaagtgtatctggaggagatacgcttaggaatctgcttgctatgccgtattcgtctctctcgcagcagctcaagcggtccgctttgga  8952600                                                <------MYB83                                                <------MYB46(1)                                                ----------->GT1                                               --------->MYB59                                               --------->MYB46(2)                                             <---------MYB52(1)                                           <------MYB46(1)                                  <---------ANAC46 ---------->DOF2                  <---------ANAC58                                                  - --->ZmHOX2a(2)     <-----------ARR10      <------MYB83                            <------MYB83    -- -----ARR11(3)      --------->ARR14(2)     <---------MYB46(3)                      <------MYB46(1) <- ---->ARR11(3)      <---------ARR14(2)   <---------WOX13(1)                    <-----------RAV1(1) <- -----AGP1         --------->GLK1(1)   --------->ATHB12                        ====================== -DOF2     <---------MYB52(1)     <---------ANAC58                            <---------YAB1   <----- ----CCA1(2)       <---------CCA1(2)  <---------YAB1                       <---------YAB1   <--------   tctcaaagaaaccgtaagcgcaaatctactcttcttccttgtgattggttaggttactctgaaatggtcactaagttgttattgttggtatctctcaggt  8952700                                                                       <---------ANAC46                                                                       <---------ANAC58                                                                       <---------ANAC58  <---------WOX13(1)                                               <---------At4g35610 -------->ATHB12                                      <---------HSFB2a(2)       --------------->AGL15 ------->ICU4                                         --------->HSFB2a(2)       <---------------AGL15 --------YAB1                                        <---------LBD16  <-------TEIL --------ZAT6                  <-------GAMYB    --------->ZAT14    <---------ZAT2 ===RAV               --------->ZAT14          <----------DOF2     --------->At4g35610 ----MYB52(1)         --------->ZAT18    <---------ZAT14           --------->ZAT2 <----------DOF2 ---RAV1(2)           <---------ZAT14    --------->ZAT14  <---------GLK1(1)  <-----------GT1        -   agtgattgaaacttggggttttagtggacagactgttgaagacttcactctttactctggaactcttggagctgcgtttttactctttagagcttatcag  8952800  Previous    Next  AGI:  At2g20760.1    Description:  protein binding / protein transporter/ structural molecule. similar to protein binding / protein transporter/ structural molecule [Arabidopsis thaliana] (TAIR:AT3G51890.1); similar to unknown [Populus trichocarpa] (GB:ABK93243.1); contains InterPro domain Clathrin light chain; (InterPro:IPR000996) Range:  from: 8949844    to: 8952325    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At2g20770.1    Description:  GCL2 (GCR2-LIKE 2); catalytic. similar to GCR2/GPCR (G PROTEIN COUPLED RECEPTOR), abscisic acid binding/ catalytic [Arabidopsis thaliana] (TAIR:AT1G52920.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN64758.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO23955.1); contains InterPro domain Six-hairpin glycosidase-like; (InterPro:IPR008928); contains InterPro domain Lanthionine synthetase C-like (InterPro:IPR007822) Range:  from: 8952399    to: 8954391    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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