Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                   <-----------HVH21                                                                            <---------HSFB2a(1)                                                                            <---------GLK1(1)                                                            --------->LBD16--------->GLK1(2)                                                           --------->DEAR3(1)    --------->LBD16        ----------------->AGL1                            <---------LBD16 <---------GLK1(2)    --------->At4g35610                                   --------->At4g35610   --------->ANAC46    <---------At4g35610             <---------ALFIN1     --------->MYB52(1)<-----------ARR10    ----- ------GLK1(2)                     --------->LBD16  ---------->DOF2    --------->YAB1     --------->MYB52(1)   aatctctgatgccaaaactgagaacccttctccattccccaactgttcaatctataaagcaccggacttggaattagaatctccgtcaaaactagcgaaa  8942300                                                              <----------DOF2                                   <---------ZAT2            <---------ANAC58                                   --------->At4g35610       <---------ANAC58                                   <---------At4g35610   <---------GLK1(1)                                   --------->TGA1a       --------->GLK1(1)                                   --------->ZAT2       <---------ARR14(2)                                   ----------->RAV1(2)  --------->ARR14(2)                                   ======================================bZIP_DOF                                  ------->TEIL         <------ZmHOX2a(1)                        -----                               --------->ANAC58<---------ANAC46                                 -----                           <------ZmHOX2a(1)   <---------ANAC58    <----------ARF1         <---------ETT(2)            --------->TOE2(3)  --------->ANAC58<---------ANAC58    <----------ID1          --------->ETT(2) ---->AHL20(2)   <---------ATHB12<---------ALFIN1     ----------->ARR10                   <----------   aaataaaacttcatccctaatcaatggaaggagacgcacctgagtagtttcttgggaggatttgcttttgagacaagagcatatgagagaaggtcgacaa  8942400                                                                          <---------At4g35610                                                                          --------->At4g35610                                                                      --------->ANAC46                                                                      --------->HSFB2a(2)                                                                      --------->ANAC58                                                                      --------->ANAC55(2)                                                                      --------->ANAC58                                                                     <---------LBD16                                                                   --------->ARR14(2)                                                                   <---------ARR14(2)                                                                --------->ALFIN1                            <---------MYB52(1)                <---------ANAC58                           --------->LBD16                    <---------ANAC46                      <---------HSFB2a(1)                     <---------ANAC58                      --------->HSFB2a(1)                  --------->DEAR3(1)                      <---------HSFC1(2)                  <---------LBD16----------->RAV1(1)                      --------->HSFC1(2)<---------SPL7    <---------At4g35610                  --------->ANAC46    <------NtERF2       --------->DEAR3(2)                  --------->ANAC58  <---------DEAR3(1)    --------->At4g35610                  --------->ANAC58 <------NtERF2          --------->ATERF1(1)      <---------GLK1(1)         <------ZmHOX2a(1)<---------ANAC46               --------->MYB52(1)        --------->GLK1(1) ---->ANAC58   <----------ID1--------->SPL7              ----------------------->TaNAC69(2) ---->ANAC58 --------->CCA1(2)<-----------RAV1(1)       <---------WRKY38(1) ------->GAMYB         --- -----------WRI1 <---------------------WRI1           <-----------HVH21--------->LBD16  --------->MYB52(1)   gtactagcagaggagagacgacgaaactccgtatgtcgtcgtcgttcggaacaattagtcaccggcgtgtttccgcaactgaaggaaacccatcggccta  8942500                                                      <---------WRKY18(1)                                                     --------->WRKY12                                                     ----------->HVH21                                                   ==================bZIP_DOF                                                   <---------TGA1a                                                   --------->TGA1a                                                   <---------O2        ------>NtERF2                              --------->O2                         --------->YAB1       --------->DEAR3(1)                     --------->ANAC58                         <---------ATHB12    --------->DEAR3(1)                        --------->ANAC58                         <---------ATHB51 --------->YAB1                   --------------->AGL15   <----------DOF2     ------------>CBF <---------ICU4              ------>ZmHOX2a(1)--------->ANAC46               *TSS  ------------>CBF ------>YAB1 ----------->HVH21    ===================================================================   gaatcatcgccgtctctgaccagagagtctcctcttcttcatatagccaagccacttgacctttcaagttactaccatggaccaattcaattatgtggta  8942600                 <----------DOF2                 --------------->AGL15                =====================================================================MADS_MADS                <-----------------AGL1                <-----------------AGL2                <-----------------AGL3               ---------->ID1              <-----------GT1       <------------CBF                                              <---------------AGL15      <---------ICU4                                                 --------------->AGL15      --------->ATHB51                                             --------->At4g35610      -------->HAHB4                                      <---------ARR11(3)      <--------ATHB1                                     <---------CCA1(1)     --------->AHL20(2)                                  --------->RVE1(1)     <---------ATHB51                                    --------->CCA1(1)     --------->ICU4                                      <---------GLK1(1)                         <-     <---------AHL20(2)                                  --------->GLK1(1)                      <----     <---------YAB1                                      <---------RVE1(1)                     <-----    <---------AHL20(1)                                  --------->ARR11(3)                     ------    --------->AHL20(2)                                  <---------ARR11(3)---------->DOF2      ------   --------->YAB1<---------------AGL15  <---------AHL20(2)--------->ARR11(3)         <---------ANAC55(2) ================================MADS_MADS       ------------>CBF  <---------At4g35610  *TSS  -------   atccaaaataattgtttttctttttttggcatcaagtgtgattttttttttgtcaatagatatcttcttagctcaaaaaaggaaaacaagtatcaaaaaa  8942700                                                                                                  ---                                                                                                 <---                                                                                                 ----                                                                                                 <---                                                                                                 ----         <---------YAB1                                                                        ------       <-----------GT1                                           <---------YAB1                ------     <---------DAG2                             <---------ARR14(2)                             ------     <----------DOF2                            --------->ARR14(2) <----------DOF2             ------ ----------GT1                                 <------ZmHOX2a(1)<---------ARR11(3)           <------- -----ICU4                                ----------->RAV1(1)   --------->ARR11(3)           -------- ----AHL20(2)        ---------->DOF2--------->HSFB2a(2)         <-----------GT1         --------->HSFB2a(2) --->AHL20(1)   <---------ANAC58  --------->At4g35610         <---------YAB1            ------>ZmHOX2a(1) --->AHL20(2)   <---------ANAC46  ----------->RAV1(2)  ---------->DOF2                  <---------HSFB2a(2) -->AHL20(2)    <---------ANAC58  ====================RAV----------->GT1   <---------GLK1(1)---------   attacaactttacgatttgcttagaaaggagaagacatctggagcaacaggatttacaaaagttattatctttatcgatttctcttcttcctagacccaa  8942800                    <---------ANAC58 ---->GAMYB         <---------ANAC58 ------MYB55(2)     <-------GAMYB ----->DEAR3(2)    --------->MYB55(2) ------MYB52(2)    <------MYB46(1) ----->MYB46(3)    --------->MYB52(2) >MYB46(1)         <------MYB83                                              --------->TOE1(2) ----->RAV1(1)     <---------MYB46(3)                                     --------->ARR14(2) >MYB83           <---------AtMYB61                                       --------->ARR11(3) --->MYB52(1)  <-----------RAV1(1)                                        <---------ARR14(2) --MYB59       <---------MYB46(3)                             <---------TOE2(3) ->MYB46(3) <-----------RAV1(1)                              ---------->DOF2------>ZmHOX2a(2) >ANAC46 --------->GLK1(2)                                 <---------YAB1<------ZmHOX2a(1)<----------   cagacgaagagaatttgttgttggttgtctctggtctcttcgtctaggttttttttgggttattaaagatggtgaggatcgtgagaagttgtttacagtc  8942900                                      <---------WOX13(1)                                  <------MYB46(1)                               <-------GAMYB                              --------->ATHB12                              <------MYB46(1)                                                   -----                              <---------MYB46(3)                                                <----                              <------MYB83                                                     ------                              --------->MYB55(2)                                               ------                  <---------------AGL15                  <----------DOF2                       <-----                 <-----------------AGL3               --------->ANAC46                         <-----                 <-----------------AGL2              <---------ZAT14             --------->ANAC58              <---------ARR14(2)  <------MYB83       --------->ZAT14  --------->MYB59         <------              --------->ARR14(2)<--------P  ----------->ARR10     --------->ATHB12            -------   ---------->DOF2--------------->AGL15     <---------YAB1 <---------MYB52(1)    --------->ANAC58 -GT1    ----------->GT1     <---------AtMYB61<---------GLK1(2)<---------At4g35610        -----------   catgttaaagctcgtgaattctctaattgggatggttgggattgctatgattctctacgctgtttggctgattaggcaatggcaagaacaaatgggaaat  8943000          <---------GLK1(2)  <----------DOF2 ---->HSFB2a(1) -----HSFB2a(1) --->ARR14(2)                --------->LBD16                                            <-------GAMYB --->ARR11(3)               <---------ANAC46                                  <----------DOF2 ----ARR14(2)               --------->ANAC55(2)          <---------ANAC58     <---------DAG2<-------- ----ARR11(3)               <---------ANAC55(1)          <---------ANAC58    <---------ANAC58   <---- ---GLK1(1)                 <---------ANAC55(2)          <---------ANAC46    <---------ANAC58------->TEIL -->GLK1(1)   <---------YAB1<---------ANAC58       <----------DOF2    <---------DAG2  <---------ANAC58 >GT1 <---------At4g35610   <---------ANAC58  <-------TEIL            <----------DOF2 <---------ANAC58   cttccttttgctgattctgatcaccctgttccgtggtatgttgaaagtttcatctttttgtgtgtttgatcactttctggctttttgggcgtttgtatct  8943100                  <------MYB46(1)                  <------MYB83                <--------P              --------->ATHB12                                                   <---------ANAC46              <---------MYB46(3)                                                 --------->ALFIN1              --------->MYB55(2)                                 <---------HSFB2a(2)             --------->ALFIN1                                    --------->HSFB2a(2)         <---------ANAC58                             <---------YAB1           --------->ALFIN1  <---------AHL20(2)                                  <------ZmHOX2a(2)      <---------ANAC46  --------->AHL20(2)  --------->MYB52(1)             --------->ARR11(3)     <---------TOE2(3) -CCA1(2)<---------ANAC58                            <---------ARR11(3) --------->CCA1(2)     ------- ------DOF2  <---------AtMYB61               <------NtERF2   <---------GLK1(1) <---------ANAC46     <   ttgtttaaattccgagtggttggagaacggtactgagcaatttaggcagagacaagatcatagatttctgtaagatttgaggtgtgtggaagctagaagc  8943200  Previous    Next  AGI:  At2g20725.1    Description:  CAAX amino terminal protease family protein. similar to CAAX amino terminal protease family protein [Arabidopsis thaliana] (TAIR:AT1G14270.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO69725.1); contains InterPro domain Abortive infection protein (InterPro:IPR003675) Range:  from: 8940652    to: 8942577    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At2g20740.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G20230.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO23953.1) Range:  from: 8942688    to: 8944593    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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