Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                    <---------AHL20(1)                                                                --------->AHL20(1)                                                                <---------AHL20(1)                              --------->ANAC46                  <---------ARR11(3)                ---                        <---------ANAC58              --------->ATHB12                         <-----                  <---------MYB52(1)               <------------CBF  <---------AHL20(2)      --------             ------------>MYB.PH3(1)              --------->ATHB12--------->ARR11(3)         --------         --------->AHL20(2)--------->ZAT18        --------->ATHB51<---------ARR11(3)         --------    --------->AHL20(2)  <---------ANAC58         <---------YAB1 --------->ARR11(3)    --------->YAB1 ----------DOF2 ----------->GT1                 --------->TOE2(3) --------->AHL20(1)--------->AHL20(2) -------------->AGL15   <---------ANAC46  --------->YAB1  ----------->GT1        <---------ANAC55(2) ---ICU4--------->AHL20(2) <---------ZAT18<---------ICU4 ------>ZmHOX2a(2) <---------YAB1<-----------GT1   tacttttaaaataaaaaactgttatttcgtgcacatcatctcattcattacattattgatcggaaaaatatttttttgttattacttaaaataacaagac  8907100                                                                         --------->ARR11(3)                                                                         <---------ARR11(3)                                                                         <---------AHL20(1)                                                                       --------->ARR11(3)           -     <-----------GT1                              ---------->DOF2      <---------AHL20(1)           <    <-----------GT1                    ------->MYC4                    --------->AHL20(1)           -   <---------AHL20(2)                  ------->MYC2             --------->TOE1(3)                   < ------>ICU4                           <-------MYC2        <---------DAG2--------->AHL20(1)         < ----ARR11(3)                          ------->MYC3        <----------DOF2                          < ->ANAC46                 <-----------HVH21   ---------->DOF2   --------->TOE2(3)                  -- ->ANAC58           <-----------GT1    <-------MYC3  ----------->GT1   <---------ARR11(3)         <-- ->ANAC58    <-----------GT1--------->YAB1 ----------->RAV1(1)  --------->YAB1                   ----   attattttatcagtttttctagttactctgtcatgacaacatgtgcaacaaagaaaggaaactttatcttaaaaatattttcaaacaaattcgaacaaaa  8907200                                                                                                    -                                                                                                    <                                                                                                  <--                                                                                                 ----                                                                                                 <---                                                                                             <-------MYC2                                              ---------->DOF2                                <-------PIF5                                             <---------MYB52(2)                       ---------->DOF2                                        --------->ANAC58                             ----------->HVH21         ---------->DOF2                --------->ANAC58                           ----------->RAV1(2)   --------->ETT(2)                     --------->ANAC46                     <---------ANAC58------->PIF5   <---------ETT(2)                     --------->ANAC55(1)                  <---------ANAC46------->MYC2 -------->O2                            --------->ANAC55(2)   --------->ANAC58  --------->WRKY12<---- ---------O2                            <---------ANAC55(2) <---------ANAC46 <---------ANAC58<-------MYC3 -------->bZIP60(1)                --------->MYB46(3)-------------->OsCBT --------->ARR14(2)--------- ---------bZIP60(2)              --------->ANAC58   ------>NtERF2         <---------ARR14(2)<-------- ---------bZIP60(1)         <----------ID1   --------->MYB46(3)  --------->SPL7 --------->WRKY38(1)<- ---------ANAC46          ---------->DOF2  ----------->RAV1(1)--------->ANAC58--------->LBD16------->MYC3 --------->STF1     <---------ANAC46--------->AtMYB61<------NtERF2        --------->GLK1(2) <-------- -------TGA2(2)   <---------ANAC55(2) <---------ALFIN1<----------DOF2    <---------GLK1(2)  <-------- ------->TGA1 --------->CCA1(2)  --------->ANAC58  <---------ANAC46--------->ZAT6 ------->TEIL-------   tgacgtcgacaaaaagaaatacgcgtgtaaaagacaaaccacacgcaacaaaggcgcgtttagcgcgtaagactagaatccgtggacctgaagcgcgtgg  8907300       <---------YAB1    --------->GLK1(1)   <---------ARR14(2)   --------->ARR14(2) <------NtERF2 -------->LBD16 ------NtERF2 -------LBD16 ----->PCF5 ------PCF2 -----SPL7 >ALFIN1                                                         <---------DAG2 -ANAC58                                    <-----------------AGL1       <-----------TBP --------LBD16                         <---------ICU4            <----------DOF2   --------->ARR14(2) -ANAC58                              --------->ICU4           <---------------AGL15 -ANAC46                 ------------>CBF  <-----------GT1     --------------->AGL15             ---- -->ALFIN1    ---------->ID1      ----------->RAV1(1)       <-----------GT1        <---------ARR14(2)   gccgggattttcatttgtcttaactgaaacaatgggccacataattaacaaaataggcccatttacacttttgggttatatagaatatttgctctggtcc  8907400                                                                                             --------                                                                                          -----------                         <---------AHL20(2)                                      <------NtERF2                        <---------AHL20(1)                                     <---------DEAR3(1)                        --------->AHL20(2)                                    --------->At4g35610                        <---------AHL20(2)                                    <---------At4g35610<---                    <---------AHL20(2)         <---------ALFIN1            --------->SPL7--------->YAB1 ------->RAV1(1) ----------->GT1 ---------->DOF2                          ------>ZmHOX2a(1)  --------   aacaaattttgaatttcgaaagttaattttttttgaaaagcttcacttcccactctctctctctctctctctcttcctacggctgcgaaaatgacaatcg  8907500                  <---------ARR14(2)                  --------->ARR14(2)                 <---------GLK1(1)                 --------->GLK1(1)               <------NtERF2               --------->ATERF1(1)             --------->DEAR3(1)            <---------LBD16            --------->RAP2.3(1)            <------NtERF2            --------->ATERF1(1)           ------>NtERF2           --------->ABI4(1)           <---------ATERF1(1)          --------->RAP2.3(3)          --------->RAP2.3(2)          --------->DEAR3(1)          <---------DEAR3(1)         --------->RAP2.3(1)         <------NtERF2         --------->ORA47(2)         --------->RAP2.6(1)         --------->ATERF1(1)         --------->ERF1         --------->RRTF1(1)         --------->DEAR4(2)        ------>NtERF2        <---------DEAR4(2)        <---------RAP2.3(1)        <---------ATERF1(1)            <---------ANAC55(2)       --------->ANAC58                --------->ANAC55(2)       --------->DEAR3(1)          <---------ANAC58       --------->ANAC58            <---------ANAC58       <---------DEAR3(1)      --------->LBD16 ->GLK1(2)<---------ATERF1(2) --------->O2         <----------DOF2 ->CBF --------->ANAC46   ----------------------->TaNAC69(2)        <---------At4g35610 --------HVH21--------->LBD16 <---------O2------->TEIL    ------>ZmHOX2a(1)        <----------DOF2 ---->MYB.PH3(1)----------->ARR10  <---------ANAC46<---------DAG2   --------->At4g35610             <   gttacagagacgccgccggagacccgctcttcccgtggcttatgtaactcatgctttatccttccttctcatctaactaattgtgctatatgtgtcaaaa  8907600                                                                         ----------->GT1      ------>ZmHOX2a(2)                                                                     --------->ANAC46       ---------                                                                ------>ZmHOX2a(2)       --------->CCA1(2)                                                              <---------ARR11(3)       --------->ARR14(2)                                                              <-----------ARR10        <---------ARR14(2)                                                              --------->GLK1(2)      --------->LBD16                                                              --------->ARR11(3)    <---------ANAC46                                                              --------->ARR14(2)    <---------HSFB2a(2)                                                              <---------ARR14(2)   <---------LBD16                                             --------->AHL20(2)<------ZmHOX2a(2) --------->GLK1(2)    <---------YAB1                         ----------->GT1    <---------AGP1   <---------ICU4<------ZmHOX2a(2) ---------GLK1(2)                         ----------->GT1    <------ZmHOX2a(1)--------->ICU4<--------   tggattctaattttccgatgttgtattttggggttttcacagggagattaaaaattcgatggaggatctatacgctggtaaaaattccggatacgatctc  8907700                                                                          ------>ZmHOX2a(2)                                                                         --------->CCA1(2)                                                                         --------->ARR14(1)                                                                         <------ZmHOX2a(2)                                                                        <---------ARR14(3)                                                                        --------->ARR11(3)                                                                        <---------ARR11(3)                                                                        --------->ARR14(2)                                                                        <---------ARR14(2)                                                                        --------->ARR14(3)                                                <---------MYB59         --------->AGP1                                              --------->SPL7            <---------AGP1                                            <---------SPL7         ------>ZmHOX2a(1)                                      --------->GLK1(2)            =============HOX2a_HOX2a                                     --------->ARR11(3)            ==============HOX2a_HOX2a                                     <---------ARR14(2)       <---------GLK1(2)                  ------->TEIL       --------->ARR14(2)      <---------At4g35610                 <---------CCA1(2)   <---------ARR11(3)      --------->At4g35610            <-------- >ARR11(3)   >>>>>>>>>ARR2           <---------GLK1(2)  --------->bZIP60(1)              <-----------GT1 -ARR11(3) <---------AHL20(2)      ----------->ARR10    <---------bZIP60(1)              ------->TEIL   gataagcttctatttgattgtatctcaacttataagaaagattctcggtaccgaaatgacctcagattcctcaagatctggtttctctatgtaactttac  8907800                                          <----------DOF2                                       <----                                     <----------DOF2                                      <---------AHL20(2)                        <---------At4g35610                  --------->ATHB12         ----------->GT1 --DOF2                 --------->At4g35610    ------>ZmHOX2a(1)              --------->ALFIN1  <----   taaaaccctctctcccaacttgtttgagcttaaattgtgcttttctttcctcgattgtttgtttgattagcattcttagggtttgggattgttatattgc  8907900                                                                      --------->ARR14(3)                                                                      --------->ARR11(3)                                                                      <---------ARR14(3)                                                                    ----------->ARR10        <---------REM1(1)    ----------->GT1                    --------->ANAC58   --------->At4g35610       <-------GAMYB                      --------->ANAC58   <---------At4g35610      ----------->GT1                     <------NtERF2   ----------->GT1  --------->MYB52(1)     <---------LBD16               <----------DOF2<---------GLK1(2) -----ANAC58            --------->ALFIN1              <---------ANAC58<---------ARR11(3) -----ANAC58     <-----------GT1          ------->TEIL<---------ANAC58<---------ARR14(2)   gaatcaactgatgtagatgttacagtttgggggttaaattgttgaatctcttcttagcttgaaggcagggaagattttgagagggtttatagagaaattg  8908000  Previous    Next  AGI:  At2g20635.1    Description:  similar to spindle checkpoint protein-related [Arabidopsis thaliana] (TAIR:AT2G33560.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO69771.1); contains InterPro domain Mitotic checkpoint serine/threonine protein kinase, Bub1 (InterPro:IPR015661); contains InterPro domain Mad3/BUB1 homology region 1 (InterPro:IPR013212) Range:  from: 8907491    to: 8908754    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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