Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100               --------->TOE1(2)          <-----------GT1                 <----------DOF2  --------->YAB1                     --------->RAP2.6(3) <---------YAB1                   ---------->DOF2                                               ----- -------->ARR11(3)              ------>ZmHOX2a(1)                <----------ID1                 ----- ---------ARR11(3)             --------->TOE1(3)          --------->YAB1                        ----- -->GLK1(2)  --------->TOE2(2) --------->TOE2(3) <-------TEIL---------->DOF2       --------->YAB1   aatatcatcgtttaacatgcgagatgctaacttccttaaaacggctctacgtacaagttatcacaaagaaacaaatatagcttaatgagaaacagaacaa  8906600                            --------->GLK1(2)                                           --------->YAB1                           <---------GLK1(2)                 ---------->DOF2      --------->At4g35610                         <---------YAB1        --------->ANAC58             <---------ANAC58         <------ZmHOX2a(2) <---------ARR11(3)  --------->ANAC46    ---------->DOF2<---------At4g35610 ---->ANAC58  <------ZmHOX2a(2)      <---------ZAT18    ----------->GT1     <---------ANAC46    ----- ---->ANAC58<---------At4g35610   ---------->DOF2     ---------->DOF2       <---------ANAC58 -------- ---->ANAC46--------->At4g35610<----------DOF2 --------->ANAC58<----------ID1  --------->WRKY38(1)   gacatacaaggatcagatcacaaaatcaagattctttagagcccttgaaacgctactaaagaaaaaagaaaaagactagcgttgagctaagcataccttc  8906700         --------->GLK1(2)         <---------ARR14(2)         <-----------ARR10        <---------GLK1(2)                          <----------DOF2 ---->REM1(1)                                   ------>NtERF2                     ----------->GT1 ->TOE2(3)       ------>NtERF2      --------->GLK1(2)             <---------YAB1---------->DOF2------   atcttatggagaatctctctgcctgccattgttacaagaatttgtttctctgcctttgtgtctgaaatatgaatgattctaagaaagaaaaacagagaga  8906800                                                                                                <----                                                                                           <------NtERF2                                                                                          ------>NtERF2                                                                                          <---------ATERF1(1)                                                                                         --------->DEAR3(1)                                                                                         ----------->HVH21                                                                                         --------->At1g77200                                                                                         --------->RAP2.3(3)                                                                                         --------->DREB2C(2)                                                                                        --------->ATERF1(1)                                                                  --------->ATHB12      --------->RAP2.3(1)                                                                 --------->ICU4         --------->ERF1                                                               <--------HAHB4           --------->ORA47(2)                                       <-------MYC3            --------->YAB1           --------->DEAR3(2)                                       ------->MYC3            <---------ICU4          --------->LBD16                   ------->TEIL   <<<<<<<<<GATA-1             <-----------------AGL1   <---------ATERF1(1)                <---------YAB1    <<<<<<<<<GATA-2             <---------YAB1           <---------At4g35610           <---------AHL20(2)     <<<<<<<<<GATA-4       --------->ICU4                 --------->At4g35610           <---------ICU4         <<<<<<<<<GATA-3   <---------MYB52(1)    --------->At4g35610   <----          --------->AHL20(2)    --------->WOX13(1) ----------->GT1--------->ATHB51     ------>NtERF2          --------->ICU4       <---------ICU4      --------->LBD16<---------ICU4      --------->DEAR3(1)     --------->ANAC55(2) ----------->GT1          <---------DEAR3(1)      <---------At4g35610------>NtERF2 --->CCA1(2) --------->ICU4   <---------ATHB12--------->MYB46(3) <---------YAB1     ------>ZmHOX2a(1)   tgagtttatgtaataaatatgaatgtgaggtaatcaatccacatgtgaacagccggtgattcttatcattattggctactgacttcctccgccgacgact  8906900                                                        <---------AHL20(2)                                                       <---------YAB1             ------>NtERF2     <                                                     <--------HAHB4               <---------RAP2.6(3)    <----------DOF2     ---------->DOF2              --------->YAB1              <---------ETT(1)   - -----DAG2         --------->ANAC58                 <---------YAB1             *TSS           <------ ------DOF2        --------->ANAC58       <---------GLK1(2)           <----------DOF2     --------->AHL20(2)   tttcttctttatatttttctcaaggcaaaagtattccctaaacaaattctctctattattatttgctacattctttcacattgccgacaaaataaaacat  8907000                                                                  <---------AHL20(1)                                                                <---------AHL20(1)                                                                --------->AHL20(1)                              --------->ANAC46                  --------->ARR11(3)                ---                        <---------ANAC58              --------->ATHB12                         <-----                  <---------MYB52(1)               <------------CBF  <---------AHL20(2)      --------             ------------>MYB.PH3(1)              --------->ATHB12<---------ARR11(3)         --------         --------->AHL20(2)<---------ZAT18        --------->ATHB51--------->AHL20(1)         --------    --------->AHL20(2)  <---------ANAC46         <---------YAB1 <---------ARR11(3)    --------->YAB1 ----------DOF2 ----------->GT1                 --------->TOE2(3) --------->ARR11(3)--------->AHL20(2) -------------->AGL15   <---------ANAC58  <---------ICU4  ----------->GT1        <---------ANAC55(2) ---ICU4--------->AHL20(2) --------->ZAT18--------->YAB1 ------>ZmHOX2a(2) <---------YAB1<-----------GT1   tacttttaaaataaaaaactgttatttcgtgcacatcatctcattcattacattattgatcggaaaaatatttttttgttattacttaaaataacaagac  8907100                                                                         <---------ARR11(3)                                                                         --------->ARR11(3)                                                                         <---------AHL20(1)                                                                       <---------AHL20(1)           <     <-----------GT1                              ---------->DOF2      --------->ARR11(3)           -    <-----------GT1                    <-------MYC3                    --------->AHL20(1)           -   <---------AHL20(2)                  <-------MYC2             --------->TOE2(3)                   < ------>ICU4                           ------->MYC2        <----------DOF2                          < ----ARR11(3)                          ------->MYC3        <---------DAG2--------->AHL20(1)         < ->ANAC46                 <-----------HVH21   ---------->DOF2   --------->TOE1(3)                  -- ->ANAC58           <-----------GT1    ------->MYC4  ----------->GT1   <---------ARR11(3)         <-- ->ANAC58    <-----------GT1--------->YAB1 ----------->RAV1(1)  --------->YAB1                   ----   attattttatcagtttttctagttactctgtcatgacaacatgtgcaacaaagaaaggaaactttatcttaaaaatattttcaaacaaattcgaacaaaa  8907200                                                                                                    <                                                                                                    -                                                                                                  <--                                                                                                 <---                                                                                                 ----                                                                                             <-------MYC2                                              ---------->DOF2                                ------->MYC3                                             <---------MYB52(2)                       ---------->DOF2                                        --------->ANAC55(2)                          ----------->HVH21         ---------->DOF2                --------->ANAC55(1)                        ----------->RAV1(2)   --------->ETT(2)                     --------->ANAC58                     <---------ANAC58------->MYC2   <---------ETT(2)                     <---------ANAC55(2)                  <---------ANAC46<-------PIF5 ---------O2                            --------->ANAC46      --------->ANAC58  --------->WRKY38(1)<- -------->bZIP60(1)                     --------->ANAC58    <---------ANAC46 <---------ANAC58------->PIF5 -------->O2                       --------->MYB46(3)<------NtERF2        --------->GLK1(2) <-------- ---------bZIP60(1)              --------->ANAC58   ------>NtERF2         --------->ARR14(2)<-------- ---------ANAC46            <----------ID1   --------->MYB46(3)  --------->SPL7 --------->WRKY12<---- ---------bZIP60(2)       ---------->DOF2  ----------->RAV1(1)--------->ANAC58--------->LBD16<-------MYC3 --------->STF1     <---------ANAC46--------->AtMYB61-------------->OsCBT <---------ARR14(2)<-------- -------TGA2(2)   <---------ANAC55(2) <---------ALFIN1<----------DOF2    <---------GLK1(2)  --------- ------->TGA1 --------->CCA1(2)  --------->ANAC58  <---------ANAC46--------->ZAT6 ------->TEIL-------   tgacgtcgacaaaaagaaatacgcgtgtaaaagacaaaccacacgcaacaaaggcgcgtttagcgcgtaagactagaatccgtggacctgaagcgcgtgg  8907300       <---------YAB1    --------->GLK1(1)   <---------ARR14(2)   --------->ARR14(2) <------NtERF2 ------NtERF2 -------->LBD16 -------LBD16 ------PCF2 ----->PCF5 --------LBD16 -ANAC46                                                         <---------DAG2 -ANAC58                                    <-----------------AGL1       <-----------TBP -----SPL7                             <---------ICU4            <----------DOF2   --------->ARR14(2) -ANAC58                              --------->ICU4           --------------->AGL15 >ALFIN1                 ------------>CBF  <-----------GT1     <---------------AGL15             ---- -->ALFIN1    ---------->ID1      ----------->RAV1(1)       <-----------GT1        <---------ARR14(2)   gccgggattttcatttgtcttaactgaaacaatgggccacataattaacaaaataggcccatttacacttttgggttatatagaatatttgctctggtcc  8907400                                                                                             --------                                                                                          -----------                         <---------AHL20(2)                                      <------NtERF2                        <---------AHL20(2)                                     <---------DEAR3(1)                        <---------AHL20(1)                                    --------->At4g35610                        --------->AHL20(2)                                    <---------At4g35610<---                    <---------AHL20(2)         <---------ALFIN1            --------->SPL7--------->YAB1 ------->RAV1(1) ----------->GT1 ---------->DOF2                          ------>ZmHOX2a(1)  --------   aacaaattttgaatttcgaaagttaattttttttgaaaagcttcacttcccactctctctctctctctctctcttcctacggctgcgaaaatgacaatcg  8907500  Previous    Next  AGI:  At2g20630.1    Description:  protein phosphatase 2C, putative / PP2C, putative. similar to protein phosphatase 2C, putative / PP2C, putative [Arabidopsis thaliana] (TAIR:AT4G28400.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN70385.1); contains InterPro domain Protein phosphatase 2C-related; (InterPro:IPR001932); contains InterPro domain Protein phosphatase 2C; (InterPro:IPR015655); contains InterPro domain Protein phosphatase 2C, N-terminal (InterPro:IPR014045) Range:  from: 8904710    to: 8906979    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At2g20635.1    Description:  similar to spindle checkpoint protein-related [Arabidopsis thaliana] (TAIR:AT2G33560.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO69771.1); contains InterPro domain Mitotic checkpoint serine/threonine protein kinase, Bub1 (InterPro:IPR015661); contains InterPro domain Mad3/BUB1 homology region 1 (InterPro:IPR013212) Range:  from: 8907491    to: 8908754    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version