Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                               <---------ANAC58                                                                             <---------ANAC58                                                                           <---------AHL20(2)                                                                        <---------AHL20(1) ----->GT1                                                              --------->ARR11(3) -----ID1                                                               <---------ICU4 ---TOE2(3)          ----------->GT1                                    <---------ARR11(3) ---->GT1           ----------->GT1                                     --------->AHL20(1) ->DOF2         ---------->DOF2              --------->ANAC46   --------->ICU4 ->AGL15   --------->MYB52(1)          <----------DOF2          <---------YAB1                     <- --AGL15  --------->ICU4    --------->ARR11(3)----------->RAV1(1)     <---------TOE2(3)         <---- -->AGL3--------->YAB1      <-----------GT1--------->ANAC46<---------ANAC55(2)      --------->GLK1(1)   aaaaaaacaagaataatggaaagggttaaataacttgttttctttacacaacatttgtattaagtgaagattaatattttcttgtgaaatctattagtct  8897900                  --------->YAB1                 <---------ATHB12                     <------MYB46(1)                              <-          <---------AHL20(2)                          <---------ANAC58                            ---          --------->AHL20(2)                         <---------AtMYB61                 ------>NtERF2       --------->YAB1               <---------AHL20(2)<---------ANAC58                --------->DEAR3(1)      --------->AHL20(2)     --------->WOX13(1)---------->DOF2              <-----------ARR10    <---    ------>MYB83 <<<<<<<<<ARR2      --------->AHL20(2)<------MYB83<---------YAB1      ----------->HVH21    ------>MYB46(1)    ---------->DOF2      ------>ZmHOX2a(1) <----------DOF2  <-----------GT1  <---- ----------GT1   <<<<<<<<<ARR1     <---------ATHB12  --------->MYB111(2)    --------->ARR14(2)  ----- ------DOF2    --------->WOX13(1)--------->WOX13(1)  --------->MYB46(2)     <---------ARR14(2)  -----   ttaaccaaataataaaacaatcatacaaagtctatcaattaatgtcctctaaagtttggtgtctctttcttattggcagatttactctccgacggatgga  8898000                                             <---------AHL20(2)       --------->ANAC55(2)                  --------->AHL20(1) --------ALFIN1                             --------->AHL20(2) --->ZmHOX2a(2)                             <---------AHL20(2)                                <------ ---ZmHOX2a(2)                          <---------AHL20(2)                       --------->ICU4 -----ARR14(2)                         --------->AHL20(2)          --------->ARR11(3)         ------- -->TEIL     ----------->GT1       <---------AHL20(2)              <---------GLK1(2)         -------- ---->ARR14(2)        <-------TEIL--------->AHL20(2)               <---------ARR11(3)  <---------TOE2(3)   tccacattcacttaatagttaatatacatctattcattttataaaatttaatactgcaaaaacatacaagatttttgaacataaatatgaaggaaattaa  8898100                                       <---------ARR11(3)                                       --------->GLK1(2)                          --------->ZAT6                             ----------->TBP  <---------ANAC46        ----------->GT1------->GAMYB   <-----------ARR10             <---------YAB1   <---------ANAC58    <-----------GT1   <---------MYB52(2)                           --------->YAB1     <---------ANAC58  <-------TEIL        --------->MYB46(3)             <---------AHL20(2)        <--------P ---AHL20(2)        ----------->RAV1(1)--------->ARR11(3)         <---------YAB1<-------TEIL -->AHL20(2)       --------->REM1(1)  --------->RVE1(1)      xxxxxxxxxxxxxxxxxxx>smallRNA(si3)  ----- ->AHL20(2)   --------->ZAT6   ----------->GT1       --------->AHL20(2)     <---------TOE2(3)--------   tagattcaaccagttaaaactacaacaaacactaagtaaaaaatctactcaaaatttaaacaaaatgtattataaatagaggttgatttcttgaaacata  8898200                                                                                   <---------ZAT18                                                                                   --------->ZAT18                                                                                <---------ANAC58                                                                      ----------->GT1    <---------YAB1                                                                    <xxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                                ---------->DOF2 <---------ANAC58                                            ----------->GT1   <------ZmHOX2a(2) <---------ANAC46     --------->YAB1                      <----------DOF2    xxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)  --------->ANAC46                      <---------ANAC58    xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3) ---->AHL20(2)                  ---------->DOF2       <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)  <------- ->YAB1                ---------->DOF2  <---------ANAC58  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)   xxx   atataagtcataagattaagaacagaaaagaaaacaaagtttgcttttgtaaaattctaagacgatcaaagatggcaaaatggagtgcgatattagtgat  8898300                  <-------GAMYB                 <---------ANAC46                 <---------ANAC58                 <---------ANAC58           <---------WOX13(1)         --------->ATHB12         <---------MYB46(3)             <---------ANAC46                                           <-      xxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)            <---------AHL20(2)                          ----      <---------MYB46(3)                <---------ANAC58                                        -----     --------->ALFIN1         --------->ANAC58    <---------ARR11(3)                            -----  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) <---------ANAC58                                    ---------  <---------AtMYB61           --------->ANAC58    --------->ARR11(3)                     --------->ANAC58 --ZAT6 <---------YAB1   --------->At4g35610  ---------->DOF2                        ----------->GT1 xxxxxxxxxxxxxxxxxxxx>smallRNA(si3)     ----------->GT1                  <---------ZAT6  --------->ANAC58   actgatggtggtgattgctgcgttggcagtagaagcaaaatggagtgaaaaagattttattcaatgttttcgcaagtgttcaaagaattgtaagaaacac  8898400                                               <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                               xxxxxxxxxxxxxxxxxxx>smallRNA(si3)     <---------WOX13(1)                   <---------ALFIN1                      <<<<<<<<<GATA-1   <---------MYB46(3)                <------NtERF2                           <---------AHL20(2)  <---------YAB1                    <---------ATERF1(1)                  <---------AHL20(2)       --- --------->At5g28300                ------>NtERF2<xxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)              <-- --------DEAR3(1)                  --------->ALFIN1                      --------->AHL20(2)   ------- ----->MYB52(1)                    <---------DEAR3(1)                 <---------AHL20(1)    --------- ------>HVH21                   <---------DEAR3(1)                    --------->AHL20(1)    <-------- ---->ANAC46      ----------->GT1 --------->ATERF1(1)            --------->At5g28300    <----------DOF2 >CCA1(2)  ----------->GT1   <xxxxxxxxxxxxxxxxxxxxsmallRNA(si3) ----------->GT1<-----------GT1<------   gacggtgattgttttgaaaaatgtaaaatcaaatgcggtggcccaaaccctccccatagttcatcacggtaatatataatttatctatccctttctttaa  8898500                                                            -------->HAHB4                                                            <---------ICU4                                                            --------->ATHB51                                                            -------->ATHB1                                                           <---------YAB1                                                  <---------MYB52(2)                                                  <---------MYB46(2)                                                  <------------MYB.PH3(2)                                                  <---------MYB59      <-----------GT1                          --------->AHL20(2)  <---------AHL20(2)                       --------->AHL20(2) <---------YAB1           --------->ANAC46 --------->AHL20(2)                       --------->AHL20(2)--------->ATHB12        --------->ZAT18 --------->ICU4                           <---------AHL20(2)<---------AHL20(2)      <---------ETT(2) ------>AHL20(2)                       --------->AHL20(1)  --------->ICU4           --------->ETT(2)- -------AHL20(2)                       <---------AHL20(1)  <---------ATHB51  --------->YAB1         < -->AHL20(2)                      <---------AHL20(2)  --------->TOE2(3)  <---------AHL20(2)         - ------>AGL15                     --------->AHL20(2)--------->MYB52(1)  <---------AHL20(2)          < --DOF2                       --------->AHL20(2)<-----------GT1         --------->AHL20(2)     <----- ---AHL20(2)         <-----------GT1  --------->AHL20(2)--------->AHL20(2)  <---------YAB1     ------   atatttattaactaagttattttctacagtttttatataaatatataaattaactaacttaattattgttctaattttatgatatgtccacagaagaagc  8898600                                                       --------->AHL20(2)                         <--                               --------->At4g35610     --------->AHL20(1)                        <--- -------->TGA1a                <---------At4g35610     <---------AHL20(2)                        <--- ---------TGA1a            --------->LBD16             <---------AHL20(1)                        ---- -------->O2              --------->ANAC46         --------->REM1(1)                       <--------- ---------O2             --------->HSFB2a(2)  --------->ANAC46                         <---------AHL20(2) ----At4g35610           <---------LBD16  <----------TaMYB80              --------->YAB1<---------ICU4 --->At4g35610           <---------HSFB2a(2)<-----------GT1     <---------ARR14(2)     --------->AHL20(2)   tcacatgggatggactatgtggaagttcgcggaagcagaaaatgatataccctacattttattgtagatttgtttatcatgtctactaaatatttactat  8898700                                      <--------ATHB1                                      <---------ICU4                                      --------->YAB1                                      -------->HAHB4         <---------ANAC58                    ----                                     --------->ICU4          <---------ANAC46                   -----                                     <---------YAB1          ----------->GT1                    <----                                     <---------ATHB51        <---------ANAC58                 ------- -------AHL20(2)                   --------->YAB1   <---------AHL20(2)                        <------ ------AHL20(1)              --------->ANAC58     <----------DOF2         <---------YAB1    --------- ------ARR11(3)              <------NtERF2     --------->ARR11(3)      <---------YAB1 ----------->GT1 ----->AHL20(1)              --------->ANAC58  <---------ARR11(1)    ----------->GT1<---------LBD16 --GT1                      ------>NtERF2     <---------CCA1(2)      --------->YAB1<---------ANAC46   atattttgtagttcatttcaagaattttggcaccgaataataattctcaaatcttttattgtatcgtgaaatcgtgatttttgttttgtggaaaaatcat  8898800  Previous    Next  AGI:  At2g20619.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G20618.1) Range:  from: 8898272    to: 8898472    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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