Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                 ------>ZmHOX2a(2)                                              --------->GLK1(1)                                              <------ZmHOX2a(2)                                              <---------GLK1(1)                                             <---------AGP1                                             --------->ARR11(3)                                             <---------ARR14(2)                                             --------->ARR14(2)                                             <---------ARR11(3)                                             <-----------ARR10                                  <----                                             --------->ARR14(3)                                 -----                                             --------->AGP1                                 <-------GAMYB                                            --------->At4g35610                 <---------AHL20(1)                                    <---------MYB52(1)                          --------->ARR11(3)                     <---------MYB52(1)     <---------CCA1(2)                   --------->AHL20(1)                   <---------MYB46(3)    <------ZmHOX2a(2)            <---------ALFIN1  <---------ALFIN1       <-----------TGA1           <---------ANAC58        <----------DOF2       <---------ARR11(3)===       <-----------HVH21          <---------ZAT6       <---------MYB52(1)   --------->LBD16 --------- ->AtSPL8      ------>ZmHOX2a(1)  <---------ANAC58<---------ALFIN1 --------->AtMYB61   <---------REM1(2) ->AtSPL3      =================================HOX2a_HOX2a        --------->YAB1  <-----------GT1---   tcccttcttcgtcattcctagccgttgattccactagcgttagatcagatctccaccgttcttttgctaccatcactccgaatattttctccacggttga  8846400                                                                            --------->CCA1(2)                                                                           --------->ARR11(3)                                                                 ------>MYB83                                                                 ------>MYB46(1)           ------>MYB83                                         --------->MYB52(1)   <---------TOE1(2)                <---------At4g35610        --------->DEAR3(1)           <--------  <-----------RAV1(2)  <---------ANAC58                        --------->AtMYB61            --------- -----ARR11(3)         <---------ANAC58         --------->At4g35610        <---------ARR11(3)       - ---->ARR11(3)------>ZmHOX2a(1)     <---------ZAT2            <---------MYB52(2)        ---------->DOF2 ====================HOX2a_HOX2a    --------->At4g35610       --------->MYB46(3)     <---------At4g35610 >At5g28300------>MYB46(1)         <---------ATERF1(1)      --------->AtMYB61        --------->At4g35610 --->ZmHOX2a(2)  ------>NtERF2    <---------RAP2.3(3)    --------->ANAC46----------->ARR10  <--------   tctctcaggtaccatcctcggccatgcttccctctggctgctccaatacctgctcaaaaacaccaccaacgagttgagatatgactcagctaaagatttt  8846500                                         <-------TEIL                                      <---------ANAC58                                     ------>NtERF2                                     <------NtERF2                                     --------->At4g35610                                    ------>NtERF2                                     --------->DEAR3(1)                                    <---------RAP2.3(1)                              <------NtERF2---                                   <---------DEAR3(1)                               ------>NtERF2----                                   <---------RAP2.3(2)                             --------->DEAR3(1)                                  <---------LBD16                                  <---------DEAR3(1)                                 <-----------RAV1(1)                             <-----------HVH21---                            <---------WOX13(1)                                  --------->O2     <---                          --------->ATHB12                   <---------ANAC46   --------->TGA1a <---- -ARR11(3)              <---------WOX13(1)                   <---------REM1(1)  ===================== >ARR11(3)            --------->ATHB12<---------ANAC46     <---------ANAC46     --------->bZIP60(2) --------->DOF2     <---------WOX13(1)<---------ANAC58   <---------ANAC46       <---------O2 <------- -GLK1(2)        <---------YAB1<---------At5g28300------>ZmHOX2a(1)            <------NtERF2------->TEIL   tgtaaagaaaatgaaattcaagattgattgatttactgcggcgtgcatcgtcctctgtgtctggtgtagatgaaaccaggcctcgtcgccgatgaatctc  8846600       --------->At4g35610    ---------->DOF2 ---------->DOF2 --->NtERF2 ----->ANAC46                                                                                 ------- ------>LBD16                                                              ----------->GT1   -------- ------ETT(1)              ----------------->AGL1                        <-------MYC3        <------- -----LBD16     <------ZmHOX2a(1)     <---------ZAT18            <---------ARR11(3)      --------->AHL20(2) ===========bZIP_DOF    ----------->HVH21          ---------->DOF2--------->CCA1(2)      --------->ICU4 --GLK1(1)   <------ZmHOX2a(1)        --------->ZAT18  --------->ALFIN1  ------->MYC3  --------->TOE2(3)   cggcaaagaagcagaggaggaagaaggtgaccagaacgagtcgactcggagaacaaagtgtgtccatgatatgcatatggttaaaacagcattaattaat  8846700                                                         <---------ANAC46                                              <---------ARR14(2)                                              --------->ARR14(2)                   <---------ANAC58   <---------MYB52(1)          ---------->DOF2--------->GLK1(2)                    <---------ANAC46 -->WOX13(1)                   <---------AHL20(2)        <---------ANAC58          <---------ANAC58-- ->AHL20(2)                   --------->AHL20(2)         <---------ANAC58        *TSS <------------CBF --AHL20(2)                 --------->TOE2(3)<---------GLK1(2)             ------>ZmHOX2a(1)      <--   cagcccttggtcttgggactcttgggtcttcattaaatcgctatcaagaatctgagtttgcttgagttatcggtctcctctagttgcctattgctattac  8846800                                                                                        <---------YAB1                                                                                      <--------HAHB4                                                                                      <---------ICU4                                                                                      <---------AHL20(2)                                                                                      -------->ATHB1                                                                                      --------->ATHB51                                                                                      -------->HAHB4                                                                                      --------->YAB1                                                                                      --------->ATHB12                                                                                     --------->ICU4                                                                                     <---------ATHB51                                                                                     <---------YAB1                                                       <----------DOF2             --------->YAB1                                                      ------>ZmHOX2a(2)           <---------YAB1 ----                               --------->TOE2(3)    <---------ARR11(3)            --------->AHL20(2)                           <-----------GT1          --------->ARR11(3)            <---------AHL20(2)                        <----------DOF2        <---------TOE2(3)                 <---------AHL20(1)    ---------->DOF2 ---------->ID1            --------->MYB52(1)                 --------->AHL20(2) ------->TOE1(1)  ----------->HVH21           <-----------GT1  ---------->DOF2   --------->AHL20(1) -------LBD16   <----------DOF2--------->TOE1(3)--------->ANAC55(2)       ----------->GT1     -------   ctcggaaaaagagacatactttgacgcttttacccttagaattcaaattaacgtgatctttttgtcaaagtggatagagtgaatataattattaggggga  8846900                                                                                                 <---                                                                                                 ----                                                                   <---------YAB1               -----                                                   <---------ANAC55(2)                          <----                                                   --------->ANAC55(2)  --------->At4g35610     -----                                                   <---------ANAC55(1)  <---------At4g35610     -----                                                   --------->ANAC55(1) <-----------RAV1(1)      <----        --------->ICU4                     <---------At4g35610    <---------AHL20(2)            <----        <---------YAB1                     --------->At4g35610    <---------AHL20(1)            <----    <-----------TGA1  ------->MYC3      --------->At4g35610  --------->AHL20(2)                 -----   --------->ANAC58   <-------MYC3      <---------At4g35610  <---------AHL20(2)              ------>ZmHOX2a(1)   --------->ANAC46  ================================================bZIP_DOF        <-----------HVH21   --------->ANAC58  --------->TGA1a   <-----------RAV1(1)   <---------YAB1          <-----------TGA1 <-----------GT1    ------->TEIL    ------->TEIL  <-------TEIL  <---------YAB1       --------->TOE2(3) ----->CCA1(2)   --------->ANAC58   --------->ARR14(2)    <----------DOF2   <---------AtLEC2<-------- ---->GT1        --------->ANAC58   <---------ARR14(2)    ===========================================   tataaacgtcatttttgaaacgcacatgagtttgtctgaatctgctgctaaatacgtattctttttattatttttgctgcatgtcatcgtcagtcctcac  8847000         --------->ANAC46     --------->ANAC58     --------->ANAC58 <---------At4g35610 --------->At4g35610    --------->ZAT18 <---------ZAT2       --------->ZAT18 ----MYC3--------->ANAC58 --->MYC3--------->ANAC58--------->ANAC46 ---->O2 <---------DEAR3(1) -----ANAC46 ------>NtERF2 ---->ANAC55(2)     <-------MYC2 ---->ANAC46 <---------SPL7 -----TGA1a  <---------ZAT18 -----ANAC55(2)     ------->MYC3                     --------->AHL20(2)                          ---- -----O2--------->SPL7<---------ZAT18        <---------SPL7 ------>ZmHOX2a(1)           <---------YAB1 ---->TGA1a --------->DEAR3(1)   ----------->RAV1(1) <---------AHL20(2)  --------->ANAC58        <--- ---------PIF3(1)   ------->MYC2----------------->AGL1     --------->TOE2(3)            <---------TOE2(3) =====bZIP_DOF      <-------MYC3--------->ZAT18--------->SPL7            --------->ANAC58 ---------->DOF2   gtgagctacgcacggcgcaccatgtgcccacaaggccacaagaggtccgaacgattttaatcctaaaccagtacaacgctattttgtattaagaaagtca  8847100                    <-----------TGA1                                                              ---                    <-----------HVH21                                                             <--           <---------GLK1(2)    <---------YAB1                                                    <--      <-----------GT1<---------MYB52(1)                                                           ---    <---------AHL20(2)        --------->YAB1                                 <---------YAB1      <---   --------->YAB1  <---------ANAC58                  <-----------GT1    <----------DOF2      <------- ----->ANAC55(2)   <---------ANAC58         ----------->GT1            <---------DAG2        <------- ------ANAC55(2)   <---------ANAC46       <----------DOF2      <---------AHL20(2)         <---------SPL7   cataattttaacagattagtttcgtcagtcgattatgattccaactttgttaatttttcatgtttttaatgggccttttcttatagtcatgccctacgag  8847200                                                                 <---------AHL20(1)                                                                 --------->AHL20(1)     <---------ATHB12                                                              --------->YAB1        <---------ANAC58        <---------ARR14(2)                                    --------->AHL20(2)    <---------ANAC58        --------->ARR14(2)                                 --------->YAB1       ------->MYC3   <-----------GT1                                        <---------YAB1        <-------MYC3  <-----------GT1                                     ===================================MYC_MYB ------>ARR14(2)                                      <-------GAMYB            --------->ANAC46 -------ARR11(3)                                     <---------ANAC46          <---------O2 -------ARR14(2)                                     <---------ANAC58          <---------TGA1a ------>ARR11(3)                                  --------->ARR14(2)           --------->TGA1a ---ZmHOX2a(1)                      <-----------HVH21<---------ANAC58          --------->O2 --TOE1(1)                   --------->ANAC58     <---------ARR14(2)  ----------->HVH21 <---------YAB1 --TOE2(1)                   --------->ANAC58 <---------ZAT18<---------YAB1  <---------ALFIN1   gatttttccagttccagcccaaattttgcccatgccaatgtcatgtagagcagtttcgttgttataatatatatgacccccacgttgcctatcaatgcca  8847300  Previous    Next  AGI:  At2g20515.1    Description:  similar to unnamed protein product [Vitis vinifera] (GB:CAO40634.1) Range:  from: 8845935    to: 8846781    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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